FFCP PHASE1:Mm9::chr3:101409091..101409113,-: Difference between revisions
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{{FFCP|EntrezGene=11928|HGNC=|MCL_coexpression_id=2|UniProt=Q8VDN2|association_with_transcript=-461bp_to_NM_144900_5end|description=CAGE_peak_7_at_Atp1a1_5end|id=chr3:101409091..101409113,-|ontology_enrichment_celltype=CL:0000117!1.08e-14!23;CL:0000337!1.08e-14!23;CL:0000540!1.60e-11!33;CL:0000047!1.60e-11!33;CL:0000031!1.60e-11!33;CL:0000404!1.60e-11!33;CL:0000393!4.22e-10!39;CL:0000211!4.22e-10!39;CL:0002319!1.98e-09!43;CL:0000221!5.61e-09!44;CL:0000133!5.61e-09!44;CL:0000055!3.60e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.04e-19,23;CL:0000337,1.04e-19,23;CL:0000540,7.58e-13,33;CL:0000047,7.58e-13,33;CL:0000031,7.58e-13,33;CL:0000404,7.58e-13,33;CL:0000393,2.00e-10,39;CL:0000211,2.00e-10,39;CL:0002319,3.43e-09,43;CL:0000221,6.44e-09,44;CL:0000133,6.44e-09,44;CL:0000120,2.03e-08,3;CL:0002612,2.03e-08,3;CL:0002610,3.28e-08,3;CL:0002611,9.88e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.12e-24!52;UBERON:0005068!2.12e-24!52;UBERON:0006241!2.12e-24!52;UBERON:0007135!2.12e-24!52;UBERON:0001017!2.44e-24!73;UBERON:0005743!2.44e-24!73;UBERON:0002020!4.95e-24!34;UBERON:0000955!6.44e-24!50;UBERON:0006238!6.44e-24!50;UBERON:0000073!6.64e-24!75;UBERON:0001016!6.64e-24!75;UBERON:0002616!1.97e-23!49;UBERON:0000033!1.80e-20!63;UBERON:0002791!7.88e-20!29;UBERON:0003528!7.88e-20!29;UBERON:0001893!7.88e-20!29;UBERON:0003080!4.09e-19!40;UBERON:0002346!6.07e-19!71;UBERON:0003075!6.07e-19!71;UBERON:0007284!6.07e-19!71;UBERON:0002780!2.08e-18!39;UBERON:0001890!2.08e-18!39;UBERON:0006240!2.08e-18!39;UBERON:0004121!2.25e-17!102;UBERON:0000924!2.25e-17!102;UBERON:0006601!2.25e-17!102;UBERON:0003056!2.64e-17!49;UBERON:0000956!7.39e-16!21;UBERON:0001869!7.39e-16!21;UBERON:0000203!7.39e-16!21;UBERON:0002619!1.12e-13!17;UBERON:0007811!6.37e-12!86;UBERON:0002021!1.64e-10!10;UBERON:0000411!1.64e-10!10;UBERON:0001950!1.64e-10!10;UBERON:0000153!5.04e-10!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.92e-38,54;UBERON:0002020,1.36e-36,34;UBERON:0001017,2.11e-33,73;UBERON:0001016,2.35e-32,75;UBERON:0001049,1.49e-31,52;UBERON:0005068,1.49e-31,52;UBERON:0006241,1.49e-31,52;UBERON:0007135,1.49e-31,52;UBERON:0002021,2.84e-29,10;UBERON:0000411,2.84e-29,10;UBERON:0001950,2.84e-29,10;UBERON:0003528,1.24e-25,29;UBERON:0002791,1.24e-25,29;UBERON:0001893,1.24e-25,29;UBERON:0002346,1.29e-24,64;UBERON:0003075,1.29e-24,64;UBERON:0007284,1.29e-24,64;UBERON:0003080,2.15e-24,40;UBERON:0004121,2.65e-24,95;UBERON:0000924,2.65e-24,95;UBERON:0006601,2.65e-24,95;UBERON:0002619,3.26e-23,17;UBERON:0002616,8.45e-23,46;UBERON:0002780,1.06e-22,39;UBERON:0001890,1.06e-22,39;UBERON:0006240,1.06e-22,39;UBERON:0000955,3.25e-22,47;UBERON:0006238,3.25e-22,47;UBERON:0000956,1.45e-21,21;UBERON:0001869,1.45e-21,21;UBERON:0000203,1.45e-21,21;UBERON:0010371,6.60e-21,73;UBERON:0003056,4.37e-19,49;UBERON:0010314,1.88e-15,92;UBERON:0001948,1.60e-13,5;UBERON:0002315,1.60e-13,5;UBERON:0000025,2.11e-11,114;UBERON:0002240,3.18e-11,6;UBERON:0005174,3.18e-11,6;UBERON:0001137,3.18e-11,6;UBERON:0004111,2.72e-10,122;UBERON:0000369,7.29e-09,5;UBERON:0002435,7.29e-09,5;UBERON:0000204,7.29e-09,5;UBERON:0010082,7.29e-09,5;UBERON:0011216,8.84e-09,194;UBERON:0002257,2.03e-08,3;UBERON:0004684,3.28e-08,3;UBERON:0002275,3.28e-08,3;UBERON:0003076,1.72e-07,12;UBERON:0003057,1.72e-07,12;UBERON:0002256,9.88e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,0,0,0.336093799142464,0,0.286533439938757,0.515672092277442,1.82084814773638,3.70293685490423,1.26766280701236,0,0,0,0,0,0,0,0.414758449233911,0.675029691658453,0.210324961351382,3.99911378165325,5.30084498283872,0.367472397644862,0.191690942036473,1.83843757322004,2.20231761998777,1.65993539510744,1.22885226604995,2.63772575460388,2.47016637726506,0,0.837548997004143,0.56276261003168,0.61119299110724,2.06240009831567,3.70166370077668,1.1183966749518,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0.969750506270444,0,0.292780797011547,0.83778682725382,0,0.359445373517761,0,0.127070227073065,1.04853447583376,2.28750301409313,2.01046963380583,5.21472960576829,4.34716277461562,1.87009240103604,1.46017136760982,0.203678727700633,0,0,0,0,0,0.360124259610698,0.150704817835715,0.204109497453984,0.12811372028485,0.187403449119458,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0.841159794256509,2.57261530948211,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.329397909448022,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0.210407459670956,0.0632365371242573,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0.642202359951168,1.17211686592203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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11928 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VDN2 | |||
|association_with_transcript=-461bp_to_NM_144900_5end | |||
|cluster_id=chr3:101409091..101409113,- | |||
|description=CAGE_peak_7_at_Atp1a1_5end | |||
|id=chr3:101409091..101409113,- | |||
|ontology_enrichment_celltype=CL:0000117!1.08e-14!23;CL:0000337!1.08e-14!23;CL:0000540!1.60e-11!33;CL:0000047!1.60e-11!33;CL:0000031!1.60e-11!33;CL:0000404!1.60e-11!33;CL:0000393!4.22e-10!39;CL:0000211!4.22e-10!39;CL:0002319!1.98e-09!43;CL:0000221!5.61e-09!44;CL:0000133!5.61e-09!44;CL:0000055!3.60e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.04e-19,23;CL:0000337,1.04e-19,23;CL:0000540,7.58e-13,33;CL:0000047,7.58e-13,33;CL:0000031,7.58e-13,33;CL:0000404,7.58e-13,33;CL:0000393,2.00e-10,39;CL:0000211,2.00e-10,39;CL:0002319,3.43e-09,43;CL:0000221,6.44e-09,44;CL:0000133,6.44e-09,44;CL:0000120,2.03e-08,3;CL:0002612,2.03e-08,3;CL:0002610,3.28e-08,3;CL:0002611,9.88e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.12e-24!52;UBERON:0005068!2.12e-24!52;UBERON:0006241!2.12e-24!52;UBERON:0007135!2.12e-24!52;UBERON:0001017!2.44e-24!73;UBERON:0005743!2.44e-24!73;UBERON:0002020!4.95e-24!34;UBERON:0000955!6.44e-24!50;UBERON:0006238!6.44e-24!50;UBERON:0000073!6.64e-24!75;UBERON:0001016!6.64e-24!75;UBERON:0002616!1.97e-23!49;UBERON:0000033!1.80e-20!63;UBERON:0002791!7.88e-20!29;UBERON:0003528!7.88e-20!29;UBERON:0001893!7.88e-20!29;UBERON:0003080!4.09e-19!40;UBERON:0002346!6.07e-19!71;UBERON:0003075!6.07e-19!71;UBERON:0007284!6.07e-19!71;UBERON:0002780!2.08e-18!39;UBERON:0001890!2.08e-18!39;UBERON:0006240!2.08e-18!39;UBERON:0004121!2.25e-17!102;UBERON:0000924!2.25e-17!102;UBERON:0006601!2.25e-17!102;UBERON:0003056!2.64e-17!49;UBERON:0000956!7.39e-16!21;UBERON:0001869!7.39e-16!21;UBERON:0000203!7.39e-16!21;UBERON:0002619!1.12e-13!17;UBERON:0007811!6.37e-12!86;UBERON:0002021!1.64e-10!10;UBERON:0000411!1.64e-10!10;UBERON:0001950!1.64e-10!10;UBERON:0000153!5.04e-10!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.92e-38,54;UBERON:0002020,1.36e-36,34;UBERON:0001017,2.11e-33,73;UBERON:0001016,2.35e-32,75;UBERON:0001049,1.49e-31,52;UBERON:0005068,1.49e-31,52;UBERON:0006241,1.49e-31,52;UBERON:0007135,1.49e-31,52;UBERON:0002021,2.84e-29,10;UBERON:0000411,2.84e-29,10;UBERON:0001950,2.84e-29,10;UBERON:0003528,1.24e-25,29;UBERON:0002791,1.24e-25,29;UBERON:0001893,1.24e-25,29;UBERON:0002346,1.29e-24,64;UBERON:0003075,1.29e-24,64;UBERON:0007284,1.29e-24,64;UBERON:0003080,2.15e-24,40;UBERON:0004121,2.65e-24,95;UBERON:0000924,2.65e-24,95;UBERON:0006601,2.65e-24,95;UBERON:0002619,3.26e-23,17;UBERON:0002616,8.45e-23,46;UBERON:0002780,1.06e-22,39;UBERON:0001890,1.06e-22,39;UBERON:0006240,1.06e-22,39;UBERON:0000955,3.25e-22,47;UBERON:0006238,3.25e-22,47;UBERON:0000956,1.45e-21,21;UBERON:0001869,1.45e-21,21;UBERON:0000203,1.45e-21,21;UBERON:0010371,6.60e-21,73;UBERON:0003056,4.37e-19,49;UBERON:0010314,1.88e-15,92;UBERON:0001948,1.60e-13,5;UBERON:0002315,1.60e-13,5;UBERON:0000025,2.11e-11,114;UBERON:0002240,3.18e-11,6;UBERON:0005174,3.18e-11,6;UBERON:0001137,3.18e-11,6;UBERON:0004111,2.72e-10,122;UBERON:0000369,7.29e-09,5;UBERON:0002435,7.29e-09,5;UBERON:0000204,7.29e-09,5;UBERON:0010082,7.29e-09,5;UBERON:0011216,8.84e-09,194;UBERON:0002257,2.03e-08,3;UBERON:0004684,3.28e-08,3;UBERON:0002275,3.28e-08,3;UBERON:0003076,1.72e-07,12;UBERON:0003057,1.72e-07,12;UBERON:0002256,9.88e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,0,0,0.336093799142464,0,0.286533439938757,0.515672092277442,1.82084814773638,3.70293685490423,1.26766280701236,0,0,0,0,0,0,0,0.414758449233911,0.675029691658453,0.210324961351382,3.99911378165325,5.30084498283872,0.367472397644862,0.191690942036473,1.83843757322004,2.20231761998777,1.65993539510744,1.22885226604995,2.63772575460388,2.47016637726506,0,0.837548997004143,0.56276261003168,0.61119299110724,2.06240009831567,3.70166370077668,1.1183966749518,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0.969750506270444,0,0.292780797011547,0.83778682725382,0,0.359445373517761,0,0.127070227073065,1.04853447583376,2.28750301409313,2.01046963380583,5.21472960576829,4.34716277461562,1.87009240103604,1.46017136760982,0.203678727700633,0,0,0,0,0,0.360124259610698,0.150704817835715,0.204109497453984,0.12811372028485,0.187403449119458,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0.841159794256509,2.57261530948211,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.329397909448022,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0.210407459670956,0.0632365371242573,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0.642202359951168,1.17211686592203,0,0,0,0,0.215423397732799,0.477937595905104,0.222798674082394,0,0,0.584511715822624,0,0.321321316421807,0,0.35613120733451,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.356737635204141,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.269728692769641,0,0.26175594198403,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0.233753804363138,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,13.5540442228096,11.9684561491866,9.16632821503035,11.8578695817144,11.6464028361009,10.5755145634558,13.5004500046361,7.65546045481175,5.89085131679466,12.9440077937955,0,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.37456602987953,0.256100609619477,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0,0.342869252385415,0.354951612318675,0.476872379894642,0.872078499793971,0.0941093804153306,0.169229215783353,0.365855945745545,0.263069711437843,0.135804113845862,0,0.474540072496697,0.29551344712669,0,0.309873682371932,0.192906610981141,0.499621155875892,0,0,0.382576664137687,0,0.231867835620421 | |||
|short_description=p7@Atp1a1 | |||
}} |
Revision as of 17:45, 5 August 2015
Short description: | p7@Atp1a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Atp1a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -461bp_to_NM_144900_5end |
EntrezGene: | 11928 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.04e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.04e-19 | 23 |
neuron | 7.58e-13 | 33 |
neuronal stem cell | 7.58e-13 | 33 |
neuroblast | 7.58e-13 | 33 |
electrically signaling cell | 7.58e-13 | 33 |
electrically responsive cell | 2.00e-10 | 39 |
electrically active cell | 2.00e-10 | 39 |
neural cell | 3.43e-09 | 43 |
ectodermal cell | 6.44e-09 | 44 |
neurectodermal cell | 6.44e-09 | 44 |
granule cell | 2.03e-08 | 3 |
neuron of the ventral spinal cord | 2.03e-08 | 3 |
raphe nuclei neuron | 3.28e-08 | 3 |
neuron of the dorsal spinal cord | 9.88e-07 | 2 |