FFCP PHASE1:Mm9::chr9:91275527..91275544,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=671|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:91275527..91275544,+|id=chr9:91275527..91275544,+|ontology_enrichment_celltype=CL:0000117!1.51e-09!23;CL:0000337!1.51e-09!23|ontology_enrichment_celltype_v019_2=CL:0002613,1.19e-23,3;CL:0000120,4.23e-22,3;CL:0000117,6.13e-20,23;CL:0000337,6.13e-20,23;CL:0000540,9.86e-14,33;CL:0000047,9.86e-14,33;CL:0000031,9.86e-14,33;CL:0000404,9.86e-14,33;CL:0000393,1.58e-11,39;CL:0000211,1.58e-11,39;CL:0002612,1.27e-10,3;CL:0002319,2.13e-10,43;CL:0000221,3.80e-10,44;CL:0000133,3.80e-10,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.25e-14!52;UBERON:0005068!4.25e-14!52;UBERON:0006241!4.25e-14!52;UBERON:0007135!4.25e-14!52;UBERON:0004121!1.32e-13!102;UBERON:0000924!1.32e-13!102;UBERON:0006601!1.32e-13!102;UBERON:0002346!2.84e-12!71;UBERON:0003075!2.84e-12!71;UBERON:0007284!2.84e-12!71;UBERON:0001017!4.05e-12!73;UBERON:0005743!4.05e-12!73;UBERON:0000033!7.20e-12!63;UBERON:0002616!8.52e-12!49;UBERON:0000073!1.68e-11!75;UBERON:0001016!1.68e-11!75;UBERON:0000955!2.18e-11!50;UBERON:0006238!2.18e-11!50;UBERON:0003056!3.61e-10!49;UBERON:0003080!2.55e-08!40;UBERON:0002780!8.91e-08!39;UBERON:0001890!8.91e-08!39;UBERON:0006240!8.91e-08!39;UBERON:0003076!1.56e-07!12;UBERON:0003057!1.56e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.85e-14,5;UBERON:0002435,1.85e-14,5;UBERON:0000204,1.85e-14,5;UBERON:0010082,1.85e-14,5;UBERON:0002257,1.27e-10,3;UBERON:0003076,4.78e-10,12;UBERON:0003057,4.78e-10,12;UBERON:0001017,2.94e-09,73;UBERON:0002420,2.98e-09,8;UBERON:0007245,2.98e-09,8;UBERON:0010009,2.98e-09,8;UBERON:0010011,2.98e-09,8;UBERON:0000454,2.98e-09,8;UBERON:0001016,5.50e-09,75;UBERON:0002037,2.67e-08,4;UBERON:0002680,2.67e-08,4;UBERON:0001895,2.67e-08,4;UBERON:0010092,2.67e-08,4;UBERON:0006215,2.67e-08,4;UBERON:0004121,6.93e-07,95;UBERON:0000924,6.93e-07,95;UBERON:0006601,6.93e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0,0.285650984403804,0.441737081903227,0,0,0,0,0.766124028511126,0.614426133024974,3.95658863190582,4.57438218012048,3.64639359389732,0,0,0.61119299110724,0,1.56608848879013,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,3.22058876712702,1.67557365450764,0,0,0,0,0.299581278809645,0,0.376963056338593,0,0,0.41557608911912,0.648965052271031,0,0,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0,0.374806898238915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.776152102696527,0.428674070063185,0.354680467284547,0.356737635204141,0.493647061806363,0,0,0.21183207086382,0,0.8244312647074,0.968786560175433,0.120625849856312,0.358117032009409,0.164140899745061,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0,0,0.830298780673413,1.59609949360412,2.21953687480374,0.486213434136588,0.209613162627982,0.367687016900028,0.44449345560323,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.280924522409647,0.320125762024346,0.287177344778066,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0,0.532427418478012,0.238436189947321,0.145346416632329,0.376437521661322,0.592302255241736,0.365855945745545,0.263069711437843,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0,0.578719832943424,0.499621155875892,0.467863216890817,0.644613162144895,0.382576664137687,0,0|short_description=p@chr9:91275527..91275544,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=671 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:91275527..91275544,+ | |||
|description=CAGE_peak_at_chr9:91275527..91275544,+ | |||
|id=chr9:91275527..91275544,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.51e-09!23;CL:0000337!1.51e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.19e-23,3;CL:0000120,4.23e-22,3;CL:0000117,6.13e-20,23;CL:0000337,6.13e-20,23;CL:0000540,9.86e-14,33;CL:0000047,9.86e-14,33;CL:0000031,9.86e-14,33;CL:0000404,9.86e-14,33;CL:0000393,1.58e-11,39;CL:0000211,1.58e-11,39;CL:0002612,1.27e-10,3;CL:0002319,2.13e-10,43;CL:0000221,3.80e-10,44;CL:0000133,3.80e-10,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.25e-14!52;UBERON:0005068!4.25e-14!52;UBERON:0006241!4.25e-14!52;UBERON:0007135!4.25e-14!52;UBERON:0004121!1.32e-13!102;UBERON:0000924!1.32e-13!102;UBERON:0006601!1.32e-13!102;UBERON:0002346!2.84e-12!71;UBERON:0003075!2.84e-12!71;UBERON:0007284!2.84e-12!71;UBERON:0001017!4.05e-12!73;UBERON:0005743!4.05e-12!73;UBERON:0000033!7.20e-12!63;UBERON:0002616!8.52e-12!49;UBERON:0000073!1.68e-11!75;UBERON:0001016!1.68e-11!75;UBERON:0000955!2.18e-11!50;UBERON:0006238!2.18e-11!50;UBERON:0003056!3.61e-10!49;UBERON:0003080!2.55e-08!40;UBERON:0002780!8.91e-08!39;UBERON:0001890!8.91e-08!39;UBERON:0006240!8.91e-08!39;UBERON:0003076!1.56e-07!12;UBERON:0003057!1.56e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.85e-14,5;UBERON:0002435,1.85e-14,5;UBERON:0000204,1.85e-14,5;UBERON:0010082,1.85e-14,5;UBERON:0002257,1.27e-10,3;UBERON:0003076,4.78e-10,12;UBERON:0003057,4.78e-10,12;UBERON:0001017,2.94e-09,73;UBERON:0002420,2.98e-09,8;UBERON:0007245,2.98e-09,8;UBERON:0010009,2.98e-09,8;UBERON:0010011,2.98e-09,8;UBERON:0000454,2.98e-09,8;UBERON:0001016,5.50e-09,75;UBERON:0002037,2.67e-08,4;UBERON:0002680,2.67e-08,4;UBERON:0001895,2.67e-08,4;UBERON:0010092,2.67e-08,4;UBERON:0006215,2.67e-08,4;UBERON:0004121,6.93e-07,95;UBERON:0000924,6.93e-07,95;UBERON:0006601,6.93e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0,0.285650984403804,0.441737081903227,0,0,0,0,0.766124028511126,0.614426133024974,3.95658863190582,4.57438218012048,3.64639359389732,0,0,0.61119299110724,0,1.56608848879013,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,3.22058876712702,1.67557365450764,0,0,0,0,0.299581278809645,0,0.376963056338593,0,0,0.41557608911912,0.648965052271031,0,0,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0,0.374806898238915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.776152102696527,0.428674070063185,0.354680467284547,0.356737635204141,0.493647061806363,0,0,0.21183207086382,0,0.8244312647074,0.968786560175433,0.120625849856312,0.358117032009409,0.164140899745061,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0,0,0.830298780673413,1.59609949360412,2.21953687480374,0.486213434136588,0.209613162627982,0.367687016900028,0.44449345560323,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.280924522409647,0.320125762024346,0.287177344778066,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0,0.532427418478012,0.238436189947321,0.145346416632329,0.376437521661322,0.592302255241736,0.365855945745545,0.263069711437843,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0,0.578719832943424,0.499621155875892,0.467863216890817,0.644613162144895,0.382576664137687,0,0 | |||
|short_description=p@chr9:91275527..91275544,+ | |||
}} |
Latest revision as of 18:44, 5 August 2015
Short description: | p@chr9:91275527..91275544, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:91275527..91275544, + |
Coexpression cluster: | MCL_coexpression_mm9:671 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.19e-23 | 3 |
granule cell | 4.23e-22 | 3 |
CNS neuron (sensu Vertebrata) | 6.13e-20 | 23 |
neuroblast (sensu Vertebrata) | 6.13e-20 | 23 |
neuron | 9.86e-14 | 33 |
neuronal stem cell | 9.86e-14 | 33 |
neuroblast | 9.86e-14 | 33 |
electrically signaling cell | 9.86e-14 | 33 |
electrically responsive cell | 1.58e-11 | 39 |
electrically active cell | 1.58e-11 | 39 |
neuron of the ventral spinal cord | 1.27e-10 | 3 |
neural cell | 2.13e-10 | 43 |
ectodermal cell | 3.80e-10 | 44 |
neurectodermal cell | 3.80e-10 | 44 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.85e-14 | 5 |
striatum | 1.85e-14 | 5 |
ventral part of telencephalon | 1.85e-14 | 5 |
future corpus striatum | 1.85e-14 | 5 |
ventral horn of spinal cord | 1.27e-10 | 3 |
posterior neural tube | 4.78e-10 | 12 |
chordal neural plate | 4.78e-10 | 12 |
central nervous system | 2.94e-09 | 73 |
basal ganglion | 2.98e-09 | 8 |
nuclear complex of neuraxis | 2.98e-09 | 8 |
aggregate regional part of brain | 2.98e-09 | 8 |
collection of basal ganglia | 2.98e-09 | 8 |
cerebral subcortex | 2.98e-09 | 8 |
nervous system | 5.50e-09 | 75 |
cerebellum | 2.67e-08 | 4 |
regional part of metencephalon | 2.67e-08 | 4 |
metencephalon | 2.67e-08 | 4 |
future metencephalon | 2.67e-08 | 4 |
rhombic lip | 2.67e-08 | 4 |
ectoderm-derived structure | 6.93e-07 | 95 |
ectoderm | 6.93e-07 | 95 |
presumptive ectoderm | 6.93e-07 | 95 |