FFCP PHASE1:Mm9::chr15:85166874..85166890,+: Difference between revisions
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{{FFCP|EntrezGene=54138|HGNC=|MCL_coexpression_id=1|UniProt=P28658|association_with_transcript=63bp_to_ENSMUST00000163242,NM_016843,uc007xdd.1_5end|description=CAGE_peak_5_at_Atxn10_5end|id=chr15:85166874..85166890,+|ontology_enrichment_celltype=CL:0000540!1.81e-11!33;CL:0000047!1.81e-11!33;CL:0000031!1.81e-11!33;CL:0000404!1.81e-11!33;CL:0000117!2.07e-10!23;CL:0000337!2.07e-10!23;CL:0000393!1.23e-09!39;CL:0000211!1.23e-09!39;CL:0000221!1.54e-07!44;CL:0000133!1.54e-07!44;CL:0002319!1.89e-07!43|ontology_enrichment_celltype_v019_2=CL:0000540,1.77e-11,33;CL:0000047,1.77e-11,33;CL:0000031,1.77e-11,33;CL:0000404,1.77e-11,33;CL:0000117,2.02e-10,23;CL:0000337,2.02e-10,23;CL:0000393,1.20e-09,39;CL:0000211,1.20e-09,39;CL:0000221,1.54e-07,44;CL:0000133,1.54e-07,44;CL:0002319,1.89e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.91e-21!75;UBERON:0001016!2.91e-21!75;UBERON:0002346!1.49e-20!71;UBERON:0003075!1.49e-20!71;UBERON:0007284!1.49e-20!71;UBERON:0001017!4.45e-20!73;UBERON:0005743!4.45e-20!73;UBERON:0004121!4.93e-19!102;UBERON:0000924!4.93e-19!102;UBERON:0006601!4.93e-19!102;UBERON:0001049!2.49e-18!52;UBERON:0005068!2.49e-18!52;UBERON:0006241!2.49e-18!52;UBERON:0007135!2.49e-18!52;UBERON:0000955!2.26e-17!50;UBERON:0006238!2.26e-17!50;UBERON:0000033!5.53e-17!63;UBERON:0002616!7.15e-17!49;UBERON:0003056!1.69e-15!49;UBERON:0002020!7.81e-15!34;UBERON:0003080!1.58e-14!40;UBERON:0002780!7.47e-14!39;UBERON:0001890!7.47e-14!39;UBERON:0006240!7.47e-14!39;UBERON:0002791!3.99e-12!29;UBERON:0003528!3.99e-12!29;UBERON:0001893!3.99e-12!29;UBERON:0007811!3.50e-11!86;UBERON:0000153!6.43e-10!94;UBERON:0000025!5.36e-09!114;UBERON:0000475!1.15e-08!200;UBERON:0004111!1.63e-08!122;UBERON:0000956!5.52e-08!21;UBERON:0001869!5.52e-08!21;UBERON:0000203!5.52e-08!21;UBERON:0002619!2.84e-07!17;UBERON:0002021!6.99e-07!10;UBERON:0000411!6.99e-07!10;UBERON:0001950!6.99e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.84e-21,75;UBERON:0002346,9.05e-21,64;UBERON:0003075,9.05e-21,64;UBERON:0007284,9.05e-21,64;UBERON:0001017,4.35e-20,73;UBERON:0000073,1.09e-19,54;UBERON:0010314,1.91e-19,92;UBERON:0004121,8.22e-19,95;UBERON:0000924,8.22e-19,95;UBERON:0006601,8.22e-19,95;UBERON:0001049,2.62e-18,52;UBERON:0005068,2.62e-18,52;UBERON:0006241,2.62e-18,52;UBERON:0007135,2.62e-18,52;UBERON:0010371,1.84e-17,73;UBERON:0003056,1.63e-15,49;UBERON:0000955,2.19e-15,47;UBERON:0006238,2.19e-15,47;UBERON:0002616,6.72e-15,46;UBERON:0002020,7.57e-15,34;UBERON:0003080,1.53e-14,40;UBERON:0002780,7.25e-14,39;UBERON:0001890,7.25e-14,39;UBERON:0006240,7.25e-14,39;UBERON:0003528,3.89e-12,29;UBERON:0002791,3.89e-12,29;UBERON:0001893,3.89e-12,29;UBERON:0000025,6.53e-09,114;UBERON:0004111,1.84e-08,122;UBERON:0000956,5.43e-08,21;UBERON:0001869,5.43e-08,21;UBERON:0000203,5.43e-08,21;UBERON:0002619,2.80e-07,17;UBERON:0002021,6.90e-07,10;UBERON:0000411,6.90e-07,10;UBERON:0001950,6.90e-07,10|phase1_expression=4.96461426024861,0.348975407639361,0.909998478779072,0.30246421130683,0,0.503637815735669,0.467225281191051,2.32421982194837,2.25261955442667,3.7450324211519,4.96532107853964,5.34473465268754,1.71200729931206,1.31130603628496,0.999329285446988,1.61980213911861,0,1.89277299214943,3.42786084014347,2.54633791078818,5.86798702042381,5.36171136484781,5.48519557191764,1.91990907352088,2.52350209173887,0.57423196411502,0.86152399231815,0.861884930743556,0.760093677825496,0,1.33038306393183,1.27006134691926,1.23012957516914,0,0.866554859253824,0.664938581433969,1.42918549383658,8.78916424547506,7.0320181007142,12.5645698553712,7.64700934440319,6.83045484958446,9.71020706062307,2.64383317748712,2.93993100536592,2.56965453026354,0.782391344348039,1.09012578190223,3.29529274101708,3.30530828426282,1.39986421625363,1.43752564364972,2.68452169692378,2.90144856804538,2.01656279485478,4.63066984864705,1.43266719969378,5.15672092277442,8.29497489524351,8.99284664762456,4.43681982454325,4.06613438482959,0,0.899899717281399,0,0.7104801149461,0.299600110518405,1.92109152660777,5.18448061542388,3.10513658162888,6.09942387919008,8.56952953211411,10.3808214247258,5.75706756310284,3.45043695665651,6.43453150627015,14.3150645299205,20.1745994174597,18.7399970572617,7.78129097608144,8.69132614222892,8.85552729946492,17.3093459380856,21.9477417912355,20.6277634498694,10.3120004915784,12.8134512719193,12.3023634244698,12.0404647399763,11.0334477755907,2.31891590961342,1.72084775396277,0.679971333707751,2.15881276655127,2.59910566979068,0.896053774194671,1.40444420131752,3.74946709671727,2.33807404142582,3.18005617059306,4.3661460130771,2.56652954828636,2.54805239706646,0,6.92771331235885,6.08063677140237,5.56076889516262,0.91347103775248,1.8125651855302,2.82040064223167,4.51061849591953,4.26251669636998,5.07354093963329,4.37095657602605,4.11560474974967,3.01599819191221,9.88779870937496,0.86759614151947,0.884610551949874,2.58826959915855,1.98757366614354,0.969750506270444,0,11.7112318804619,20.1068838540917,0.510914110417183,3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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:54138 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P28658 | |||
|association_with_transcript=63bp_to_ENSMUST00000163242,NM_016843,uc007xdd.1_5end | |||
|cluster_id=chr15:85166874..85166890,+ | |||
|description=CAGE_peak_5_at_Atxn10_5end | |||
|id=chr15:85166874..85166890,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.81e-11!33;CL:0000047!1.81e-11!33;CL:0000031!1.81e-11!33;CL:0000404!1.81e-11!33;CL:0000117!2.07e-10!23;CL:0000337!2.07e-10!23;CL:0000393!1.23e-09!39;CL:0000211!1.23e-09!39;CL:0000221!1.54e-07!44;CL:0000133!1.54e-07!44;CL:0002319!1.89e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.77e-11,33;CL:0000047,1.77e-11,33;CL:0000031,1.77e-11,33;CL:0000404,1.77e-11,33;CL:0000117,2.02e-10,23;CL:0000337,2.02e-10,23;CL:0000393,1.20e-09,39;CL:0000211,1.20e-09,39;CL:0000221,1.54e-07,44;CL:0000133,1.54e-07,44;CL:0002319,1.89e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.91e-21!75;UBERON:0001016!2.91e-21!75;UBERON:0002346!1.49e-20!71;UBERON:0003075!1.49e-20!71;UBERON:0007284!1.49e-20!71;UBERON:0001017!4.45e-20!73;UBERON:0005743!4.45e-20!73;UBERON:0004121!4.93e-19!102;UBERON:0000924!4.93e-19!102;UBERON:0006601!4.93e-19!102;UBERON:0001049!2.49e-18!52;UBERON:0005068!2.49e-18!52;UBERON:0006241!2.49e-18!52;UBERON:0007135!2.49e-18!52;UBERON:0000955!2.26e-17!50;UBERON:0006238!2.26e-17!50;UBERON:0000033!5.53e-17!63;UBERON:0002616!7.15e-17!49;UBERON:0003056!1.69e-15!49;UBERON:0002020!7.81e-15!34;UBERON:0003080!1.58e-14!40;UBERON:0002780!7.47e-14!39;UBERON:0001890!7.47e-14!39;UBERON:0006240!7.47e-14!39;UBERON:0002791!3.99e-12!29;UBERON:0003528!3.99e-12!29;UBERON:0001893!3.99e-12!29;UBERON:0007811!3.50e-11!86;UBERON:0000153!6.43e-10!94;UBERON:0000025!5.36e-09!114;UBERON:0000475!1.15e-08!200;UBERON:0004111!1.63e-08!122;UBERON:0000956!5.52e-08!21;UBERON:0001869!5.52e-08!21;UBERON:0000203!5.52e-08!21;UBERON:0002619!2.84e-07!17;UBERON:0002021!6.99e-07!10;UBERON:0000411!6.99e-07!10;UBERON:0001950!6.99e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.84e-21,75;UBERON:0002346,9.05e-21,64;UBERON:0003075,9.05e-21,64;UBERON:0007284,9.05e-21,64;UBERON:0001017,4.35e-20,73;UBERON:0000073,1.09e-19,54;UBERON:0010314,1.91e-19,92;UBERON:0004121,8.22e-19,95;UBERON:0000924,8.22e-19,95;UBERON:0006601,8.22e-19,95;UBERON:0001049,2.62e-18,52;UBERON:0005068,2.62e-18,52;UBERON:0006241,2.62e-18,52;UBERON:0007135,2.62e-18,52;UBERON:0010371,1.84e-17,73;UBERON:0003056,1.63e-15,49;UBERON:0000955,2.19e-15,47;UBERON:0006238,2.19e-15,47;UBERON:0002616,6.72e-15,46;UBERON:0002020,7.57e-15,34;UBERON:0003080,1.53e-14,40;UBERON:0002780,7.25e-14,39;UBERON:0001890,7.25e-14,39;UBERON:0006240,7.25e-14,39;UBERON:0003528,3.89e-12,29;UBERON:0002791,3.89e-12,29;UBERON:0001893,3.89e-12,29;UBERON:0000025,6.53e-09,114;UBERON:0004111,1.84e-08,122;UBERON:0000956,5.43e-08,21;UBERON:0001869,5.43e-08,21;UBERON:0000203,5.43e-08,21;UBERON:0002619,2.80e-07,17;UBERON:0002021,6.90e-07,10;UBERON:0000411,6.90e-07,10;UBERON:0001950,6.90e-07,10 | |||
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| |||
|short_description=p5@Atxn10 | |||
}} |
Revision as of 18:56, 5 August 2015
Short description: | p5@Atxn10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Atxn10_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 63bp_to_ENSMUST00000163242, NM_016843, uc007xdd.1_5end |
EntrezGene: | 54138 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.77e-11 | 33 |
neuronal stem cell | 1.77e-11 | 33 |
neuroblast | 1.77e-11 | 33 |
electrically signaling cell | 1.77e-11 | 33 |
CNS neuron (sensu Vertebrata) | 2.02e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.02e-10 | 23 |
electrically responsive cell | 1.20e-09 | 39 |
electrically active cell | 1.20e-09 | 39 |
ectodermal cell | 1.54e-07 | 44 |
neurectodermal cell | 1.54e-07 | 44 |
neural cell | 1.89e-07 | 43 |