FFCP PHASE1:Mm9::chr11:36917853..36917855,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=234|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:36917853..36917855,-|id=chr11:36917853..36917855,-|ontology_enrichment_celltype=CL:0000117!1.90e-47!23;CL:0000337!1.90e-47!23;CL:0000540!9.64e-36!33;CL:0000047!9.64e-36!33;CL:0000031!9.64e-36!33;CL:0000404!9.64e-36!33;CL:0000393!5.62e-33!39;CL:0000211!5.62e-33!39;CL:0002319!1.36e-26!43;CL:0000221!6.61e-26!44;CL:0000133!6.61e-26!44;CL:0000055!6.72e-25!50;CL:0002321!1.06e-16!70;CL:0000220!1.06e-16!70;CL:0002609!2.28e-14!6;CL:0002610!5.49e-12!3;CL:0000723!5.91e-12!91;CL:0000048!5.91e-12!91;CL:0002613!2.19e-11!3;CL:0000034!5.64e-11!97;CL:0000548!1.20e-08!115;CL:0000004!1.20e-08!115;CL:0000255!1.20e-08!115;CL:0002371!2.51e-08!118;CL:0000144!5.05e-08!121;CL:0000012!5.05e-08!121|ontology_enrichment_celltype_v019_2=CL:0002614,1.74e-24,3;CL:0002610,6.68e-24,3;CL:0000117,1.61e-19,23;CL:0000337,1.61e-19,23;CL:0000540,8.03e-14,33;CL:0000047,8.03e-14,33;CL:0000031,8.03e-14,33;CL:0000404,8.03e-14,33;CL:0000393,8.52e-12,39;CL:0000211,8.52e-12,39;CL:0002319,9.33e-11,43;CL:0000221,1.59e-10,44;CL:0000133,1.59e-10,44;CL:0002613,4.77e-07,3;CL:0002321,8.13e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.87e-15!34;UBERON:0001017!3.74e-14!73;UBERON:0005743!3.74e-14!73;UBERON:0000073!1.12e-13!75;UBERON:0001016!1.12e-13!75;UBERON:0004684!5.49e-12!3;UBERON:0002275!5.49e-12!3;UBERON:0002420!1.84e-11!8;UBERON:0007245!1.84e-11!8;UBERON:0010009!1.84e-11!8;UBERON:0010011!1.84e-11!8;UBERON:0000454!1.84e-11!8;UBERON:0002791!1.13e-10!29;UBERON:0003528!1.13e-10!29;UBERON:0001893!1.13e-10!29;UBERON:0002616!4.68e-10!49;UBERON:0000955!8.36e-10!50;UBERON:0006238!8.36e-10!50;UBERON:0001049!4.08e-09!52;UBERON:0005068!4.08e-09!52;UBERON:0006241!4.08e-09!52;UBERON:0007135!4.08e-09!52;UBERON:0004121!4.56e-09!102;UBERON:0000924!4.56e-09!102;UBERON:0006601!4.56e-09!102;UBERON:0002780!1.73e-07!39;UBERON:0001890!1.73e-07!39;UBERON:0006240!1.73e-07!39;UBERON:0000033!2.91e-07!63;UBERON:0003080!2.94e-07!40;UBERON:0002346!4.33e-07!71;UBERON:0003075!4.33e-07!71;UBERON:0007284!4.33e-07!71;UBERON:0000369!5.36e-07!5;UBERON:0002435!5.36e-07!5;UBERON:0000204!5.36e-07!5;UBERON:0010082!5.36e-07!5;UBERON:0001948!8.53e-07!5;UBERON:0002315!8.53e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.74e-24,3;UBERON:0009663,1.74e-24,3;UBERON:0009661,1.74e-24,3;UBERON:0000125,1.74e-24,3;UBERON:0002308,1.74e-24,3;UBERON:0004684,6.68e-24,3;UBERON:0002275,6.68e-24,3;UBERON:0002420,1.78e-20,8;UBERON:0007245,1.78e-20,8;UBERON:0010009,1.78e-20,8;UBERON:0010011,1.78e-20,8;UBERON:0000454,1.78e-20,8;UBERON:0002950,1.16e-18,4;UBERON:0001891,1.16e-18,4;UBERON:0009616,1.16e-18,4;UBERON:0010286,1.16e-18,4;UBERON:0000073,1.10e-08,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0.725827286159344,0.405017814995072,0.420649922702764,0.285650984403804,0,0.61245399607477,0.0958454710182364,0,1.10115880999389,1.0214987046815,0.921639199537461,0.395658863190582,0.457438218012048,1.04182674111352,0,2.8138130501584,1.83357897332172,0.294628585473668,0.711858403995515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr11:36917853..36917855,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=234 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:36917853..36917855,- | |||
|description=CAGE_peak_at_chr11:36917853..36917855,- | |||
|id=chr11:36917853..36917855,- | |||
|ontology_enrichment_celltype=CL:0000117!1.90e-47!23;CL:0000337!1.90e-47!23;CL:0000540!9.64e-36!33;CL:0000047!9.64e-36!33;CL:0000031!9.64e-36!33;CL:0000404!9.64e-36!33;CL:0000393!5.62e-33!39;CL:0000211!5.62e-33!39;CL:0002319!1.36e-26!43;CL:0000221!6.61e-26!44;CL:0000133!6.61e-26!44;CL:0000055!6.72e-25!50;CL:0002321!1.06e-16!70;CL:0000220!1.06e-16!70;CL:0002609!2.28e-14!6;CL:0002610!5.49e-12!3;CL:0000723!5.91e-12!91;CL:0000048!5.91e-12!91;CL:0002613!2.19e-11!3;CL:0000034!5.64e-11!97;CL:0000548!1.20e-08!115;CL:0000004!1.20e-08!115;CL:0000255!1.20e-08!115;CL:0002371!2.51e-08!118;CL:0000144!5.05e-08!121;CL:0000012!5.05e-08!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.74e-24,3;CL:0002610,6.68e-24,3;CL:0000117,1.61e-19,23;CL:0000337,1.61e-19,23;CL:0000540,8.03e-14,33;CL:0000047,8.03e-14,33;CL:0000031,8.03e-14,33;CL:0000404,8.03e-14,33;CL:0000393,8.52e-12,39;CL:0000211,8.52e-12,39;CL:0002319,9.33e-11,43;CL:0000221,1.59e-10,44;CL:0000133,1.59e-10,44;CL:0002613,4.77e-07,3;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.87e-15!34;UBERON:0001017!3.74e-14!73;UBERON:0005743!3.74e-14!73;UBERON:0000073!1.12e-13!75;UBERON:0001016!1.12e-13!75;UBERON:0004684!5.49e-12!3;UBERON:0002275!5.49e-12!3;UBERON:0002420!1.84e-11!8;UBERON:0007245!1.84e-11!8;UBERON:0010009!1.84e-11!8;UBERON:0010011!1.84e-11!8;UBERON:0000454!1.84e-11!8;UBERON:0002791!1.13e-10!29;UBERON:0003528!1.13e-10!29;UBERON:0001893!1.13e-10!29;UBERON:0002616!4.68e-10!49;UBERON:0000955!8.36e-10!50;UBERON:0006238!8.36e-10!50;UBERON:0001049!4.08e-09!52;UBERON:0005068!4.08e-09!52;UBERON:0006241!4.08e-09!52;UBERON:0007135!4.08e-09!52;UBERON:0004121!4.56e-09!102;UBERON:0000924!4.56e-09!102;UBERON:0006601!4.56e-09!102;UBERON:0002780!1.73e-07!39;UBERON:0001890!1.73e-07!39;UBERON:0006240!1.73e-07!39;UBERON:0000033!2.91e-07!63;UBERON:0003080!2.94e-07!40;UBERON:0002346!4.33e-07!71;UBERON:0003075!4.33e-07!71;UBERON:0007284!4.33e-07!71;UBERON:0000369!5.36e-07!5;UBERON:0002435!5.36e-07!5;UBERON:0000204!5.36e-07!5;UBERON:0010082!5.36e-07!5;UBERON:0001948!8.53e-07!5;UBERON:0002315!8.53e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.74e-24,3;UBERON:0009663,1.74e-24,3;UBERON:0009661,1.74e-24,3;UBERON:0000125,1.74e-24,3;UBERON:0002308,1.74e-24,3;UBERON:0004684,6.68e-24,3;UBERON:0002275,6.68e-24,3;UBERON:0002420,1.78e-20,8;UBERON:0007245,1.78e-20,8;UBERON:0010009,1.78e-20,8;UBERON:0010011,1.78e-20,8;UBERON:0000454,1.78e-20,8;UBERON:0002950,1.16e-18,4;UBERON:0001891,1.16e-18,4;UBERON:0009616,1.16e-18,4;UBERON:0010286,1.16e-18,4;UBERON:0000073,1.10e-08,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0.725827286159344,0.405017814995072,0.420649922702764,0.285650984403804,0,0.61245399607477,0.0958454710182364,0,1.10115880999389,1.0214987046815,0.921639199537461,0.395658863190582,0.457438218012048,1.04182674111352,0,2.8138130501584,1.83357897332172,0.294628585473668,0.711858403995515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:36917853..36917855,- | |||
}} |
Latest revision as of 21:14, 5 August 2015
Short description: | p@chr11:36917853..36917855, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:36917853..36917855, - |
Coexpression cluster: | MCL_coexpression_mm9:234 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.74e-24 | 3 |
raphe nuclei neuron | 6.68e-24 | 3 |
CNS neuron (sensu Vertebrata) | 1.61e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.61e-19 | 23 |
neuron | 8.03e-14 | 33 |
neuronal stem cell | 8.03e-14 | 33 |
neuroblast | 8.03e-14 | 33 |
electrically signaling cell | 8.03e-14 | 33 |
electrically responsive cell | 8.52e-12 | 39 |
electrically active cell | 8.52e-12 | 39 |
neural cell | 9.33e-11 | 43 |
ectodermal cell | 1.59e-10 | 44 |
neurectodermal cell | 1.59e-10 | 44 |
striatum neuron | 4.77e-07 | 3 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 1.74e-24 | 3 |
telencephalic nucleus | 1.74e-24 | 3 |
midbrain nucleus | 1.74e-24 | 3 |
neural nucleus | 1.74e-24 | 3 |
nucleus of brain | 1.74e-24 | 3 |
raphe nuclei | 6.68e-24 | 3 |
reticular formation | 6.68e-24 | 3 |
basal ganglion | 1.78e-20 | 8 |
nuclear complex of neuraxis | 1.78e-20 | 8 |
aggregate regional part of brain | 1.78e-20 | 8 |
collection of basal ganglia | 1.78e-20 | 8 |
cerebral subcortex | 1.78e-20 | 8 |
regional part of midbrain | 1.16e-18 | 4 |
midbrain | 1.16e-18 | 4 |
presumptive midbrain | 1.16e-18 | 4 |
midbrain neural tube | 1.16e-18 | 4 |
regional part of nervous system | 1.10e-08 | 54 |