FFCP PHASE1:Mm9::chr8:114267768..114267787,-: Difference between revisions
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{{FFCP|EntrezGene=12927|HGNC=|MCL_coexpression_id=1355|UniProt=Q61140|association_with_transcript=-19bp_to_NM_009954,uc009nmu.2_5end|description=CAGE_peak_3_at_Bcar1_5end|id=chr8:114267768..114267787,-|ontology_enrichment_celltype=CL:0002319!1.43e-15!43;CL:0000221!2.02e-15!44;CL:0000133!2.02e-15!44;CL:0000055!8.10e-15!50;CL:0000540!1.48e-12!33;CL:0000047!1.48e-12!33;CL:0000031!1.48e-12!33;CL:0000404!1.48e-12!33;CL:0000117!1.71e-12!23;CL:0000337!1.71e-12!23;CL:0000393!1.02e-11!39;CL:0000211!1.02e-11!39;CL:0002321!1.50e-09!70;CL:0000220!1.50e-09!70|ontology_enrichment_celltype_v019_2=CL:0002319,7.33e-17,43;CL:0000117,2.15e-16,23;CL:0000337,2.15e-16,23;CL:0000221,3.42e-16,44;CL:0000133,3.42e-16,44;CL:0000540,4.39e-13,33;CL:0000047,4.39e-13,33;CL:0000031,4.39e-13,33;CL:0000404,4.39e-13,33;CL:0000393,1.82e-12,39;CL:0000211,1.82e-12,39;CL:0002321,5.91e-11,70;CL:0002609,2.56e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.33e-24!75;UBERON:0001016!1.33e-24!75;UBERON:0001017!2.69e-24!73;UBERON:0005743!2.69e-24!73;UBERON:0004121!2.14e-20!102;UBERON:0000924!2.14e-20!102;UBERON:0006601!2.14e-20!102;UBERON:0001049!7.47e-18!52;UBERON:0005068!7.47e-18!52;UBERON:0006241!7.47e-18!52;UBERON:0007135!7.47e-18!52;UBERON:0002346!1.10e-16!71;UBERON:0003075!1.10e-16!71;UBERON:0007284!1.10e-16!71;UBERON:0000955!1.02e-15!50;UBERON:0006238!1.02e-15!50;UBERON:0002616!2.07e-15!49;UBERON:0000033!1.36e-14!63;UBERON:0002020!7.52e-14!34;UBERON:0003080!3.45e-12!40;UBERON:0002780!9.02e-12!39;UBERON:0001890!9.02e-12!39;UBERON:0006240!9.02e-12!39;UBERON:0003056!1.02e-11!49;UBERON:0002791!6.98e-11!29;UBERON:0003528!6.98e-11!29;UBERON:0001893!6.98e-11!29;UBERON:0000025!2.16e-10!114;UBERON:0004111!2.22e-09!122;UBERON:0000956!1.34e-08!21;UBERON:0001869!1.34e-08!21;UBERON:0000203!1.34e-08!21;UBERON:0000153!1.53e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.53e-25,73;UBERON:0001016,1.10e-24,75;UBERON:0000073,5.73e-20,54;UBERON:0001049,4.52e-19,52;UBERON:0005068,4.52e-19,52;UBERON:0006241,4.52e-19,52;UBERON:0007135,4.52e-19,52;UBERON:0004121,1.18e-18,95;UBERON:0000924,1.18e-18,95;UBERON:0006601,1.18e-18,95;UBERON:0002346,2.30e-17,64;UBERON:0003075,2.30e-17,64;UBERON:0007284,2.30e-17,64;UBERON:0002020,9.69e-17,34;UBERON:0000955,7.80e-15,47;UBERON:0006238,7.80e-15,47;UBERON:0002616,2.07e-14,46;UBERON:0010371,2.61e-13,73;UBERON:0003528,1.48e-12,29;UBERON:0002791,1.48e-12,29;UBERON:0001893,1.48e-12,29;UBERON:0010314,2.36e-12,92;UBERON:0003080,1.82e-11,40;UBERON:0000956,4.34e-11,21;UBERON:0001869,4.34e-11,21;UBERON:0000203,4.34e-11,21;UBERON:0002780,6.44e-11,39;UBERON:0001890,6.44e-11,39;UBERON:0006240,6.44e-11,39;UBERON:0003056,1.14e-10,49;UBERON:0000025,2.84e-09,114;UBERON:0003076,3.64e-09,12;UBERON:0003057,3.64e-09,12;UBERON:0002619,8.17e-08,17;UBERON:0004111,1.29e-07,122|phase1_expression=0.960893082628764,0.348975407639361,1.81999695755814,0.30246421130683,0.500895729946347,0.16787927191189,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0.319984845586813,0,1.14846392823004,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.221730510655305,1.27006134691926,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0.506884656097573,1.10128051297009,5.47673941043627,1.96222640742402,1.97717564461025,0.388859798148567,1.1198913730029,2.87505128729943,0,0,0,1.54355661621568,1.43266719969378,0.515672092277442,4.45096213891115,5.28990979272033,5.07065122804943,1.35537812827653,3.55717918444456,0.899899717281399,0,0,1.79760066311043,4.61061966385865,7.05089363697648,3.24014251996058,4.6271491497304,5.14171771926846,3.3130281142742,5.38959516545798,4.98396449294829,7.35375029288017,1.10115880999389,2.29837208553338,1.38245879930619,2.76961204233407,2.56165402086747,2.08365348222704,0.837548997004143,0.56276261003168,1.98637722109853,2.06240009831567,3.98640706237488,4.65998614563251,1.28734528666413,0.755715601067855,0.579728977403356,0.860423876981386,0.679971333707751,0.539703191637817,0,0.896053774194671,0.702222100658759,0.340860645156116,0.519572009205738,0.35333957451034,0.704217098883403,1.28326477414318,2.54805239706646,14.2213340630666,0.216491041011214,0.506719730950197,0,0.22836775943812,0.258937883647172,0.890652834388949,0.867426633830679,0.608930956624282,1.15307748628029,0.301445281105245,0.470354828542819,0.628332956648377,0.741584903203122,0.433798070759735,0,0.970601099684455,0,0.484875253135222,0,1.17112318804619,1.8850203613211,0,0,0,0,1.64769703345305,0.915001205637253,7.03664371832041,2.43354048269187,1.02286182932132,1.24672826735736,0.648965052271031,1.62942982160506,0,0.505445516867349,0.420883711772948,0.520481771850815,0.689706313300419,1.62055916824814,1.20563854268572,1.29269348387523,0.512454881139399,1.21812241927647,0.258703370739016,2.80238390812695,3.02569728268511,1.93546236580344,2.19195732427575,0.834141747676794,2.089512999133,0.205782136407943,0.59710280045548,0,0,0,2.27838349789052,0.234526059981096,0.720248245844059,1.6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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12927 | |||
|HGNC= | |||
|MCL_coexpression_id=1355 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q61140 | |||
|association_with_transcript=-19bp_to_NM_009954,uc009nmu.2_5end | |||
|cluster_id=chr8:114267768..114267787,- | |||
|description=CAGE_peak_3_at_Bcar1_5end | |||
|id=chr8:114267768..114267787,- | |||
|ontology_enrichment_celltype=CL:0002319!1.43e-15!43;CL:0000221!2.02e-15!44;CL:0000133!2.02e-15!44;CL:0000055!8.10e-15!50;CL:0000540!1.48e-12!33;CL:0000047!1.48e-12!33;CL:0000031!1.48e-12!33;CL:0000404!1.48e-12!33;CL:0000117!1.71e-12!23;CL:0000337!1.71e-12!23;CL:0000393!1.02e-11!39;CL:0000211!1.02e-11!39;CL:0002321!1.50e-09!70;CL:0000220!1.50e-09!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.33e-17,43;CL:0000117,2.15e-16,23;CL:0000337,2.15e-16,23;CL:0000221,3.42e-16,44;CL:0000133,3.42e-16,44;CL:0000540,4.39e-13,33;CL:0000047,4.39e-13,33;CL:0000031,4.39e-13,33;CL:0000404,4.39e-13,33;CL:0000393,1.82e-12,39;CL:0000211,1.82e-12,39;CL:0002321,5.91e-11,70;CL:0002609,2.56e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.33e-24!75;UBERON:0001016!1.33e-24!75;UBERON:0001017!2.69e-24!73;UBERON:0005743!2.69e-24!73;UBERON:0004121!2.14e-20!102;UBERON:0000924!2.14e-20!102;UBERON:0006601!2.14e-20!102;UBERON:0001049!7.47e-18!52;UBERON:0005068!7.47e-18!52;UBERON:0006241!7.47e-18!52;UBERON:0007135!7.47e-18!52;UBERON:0002346!1.10e-16!71;UBERON:0003075!1.10e-16!71;UBERON:0007284!1.10e-16!71;UBERON:0000955!1.02e-15!50;UBERON:0006238!1.02e-15!50;UBERON:0002616!2.07e-15!49;UBERON:0000033!1.36e-14!63;UBERON:0002020!7.52e-14!34;UBERON:0003080!3.45e-12!40;UBERON:0002780!9.02e-12!39;UBERON:0001890!9.02e-12!39;UBERON:0006240!9.02e-12!39;UBERON:0003056!1.02e-11!49;UBERON:0002791!6.98e-11!29;UBERON:0003528!6.98e-11!29;UBERON:0001893!6.98e-11!29;UBERON:0000025!2.16e-10!114;UBERON:0004111!2.22e-09!122;UBERON:0000956!1.34e-08!21;UBERON:0001869!1.34e-08!21;UBERON:0000203!1.34e-08!21;UBERON:0000153!1.53e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.53e-25,73;UBERON:0001016,1.10e-24,75;UBERON:0000073,5.73e-20,54;UBERON:0001049,4.52e-19,52;UBERON:0005068,4.52e-19,52;UBERON:0006241,4.52e-19,52;UBERON:0007135,4.52e-19,52;UBERON:0004121,1.18e-18,95;UBERON:0000924,1.18e-18,95;UBERON:0006601,1.18e-18,95;UBERON:0002346,2.30e-17,64;UBERON:0003075,2.30e-17,64;UBERON:0007284,2.30e-17,64;UBERON:0002020,9.69e-17,34;UBERON:0000955,7.80e-15,47;UBERON:0006238,7.80e-15,47;UBERON:0002616,2.07e-14,46;UBERON:0010371,2.61e-13,73;UBERON:0003528,1.48e-12,29;UBERON:0002791,1.48e-12,29;UBERON:0001893,1.48e-12,29;UBERON:0010314,2.36e-12,92;UBERON:0003080,1.82e-11,40;UBERON:0000956,4.34e-11,21;UBERON:0001869,4.34e-11,21;UBERON:0000203,4.34e-11,21;UBERON:0002780,6.44e-11,39;UBERON:0001890,6.44e-11,39;UBERON:0006240,6.44e-11,39;UBERON:0003056,1.14e-10,49;UBERON:0000025,2.84e-09,114;UBERON:0003076,3.64e-09,12;UBERON:0003057,3.64e-09,12;UBERON:0002619,8.17e-08,17;UBERON:0004111,1.29e-07,122 | |||
|phase1_expression=0.960893082628764,0.348975407639361,1.81999695755814,0.30246421130683,0.500895729946347,0.16787927191189,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0.319984845586813,0,1.14846392823004,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.221730510655305,1.27006134691926,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0.506884656097573,1.10128051297009,5.47673941043627,1.96222640742402,1.97717564461025,0.388859798148567,1.1198913730029,2.87505128729943,0,0,0,1.54355661621568,1.43266719969378,0.515672092277442,4.45096213891115,5.28990979272033,5.07065122804943,1.35537812827653,3.55717918444456,0.899899717281399,0,0,1.79760066311043,4.61061966385865,7.05089363697648,3.24014251996058,4.6271491497304,5.14171771926846,3.3130281142742,5.38959516545798,4.98396449294829,7.35375029288017,1.10115880999389,2.29837208553338,1.38245879930619,2.76961204233407,2.56165402086747,2.08365348222704,0.837548997004143,0.56276261003168,1.98637722109853,2.06240009831567,3.98640706237488,4.65998614563251,1.28734528666413,0.755715601067855,0.579728977403356,0.860423876981386,0.679971333707751,0.539703191637817,0,0.896053774194671,0.702222100658759,0.340860645156116,0.519572009205738,0.35333957451034,0.704217098883403,1.28326477414318,2.54805239706646,14.2213340630666,0.216491041011214,0.506719730950197,0,0.22836775943812,0.258937883647172,0.890652834388949,0.867426633830679,0.608930956624282,1.15307748628029,0.301445281105245,0.470354828542819,0.628332956648377,0.741584903203122,0.433798070759735,0,0.970601099684455,0,0.484875253135222,0,1.17112318804619,1.8850203613211,0,0,0,0,1.64769703345305,0.915001205637253,7.03664371832041,2.43354048269187,1.02286182932132,1.24672826735736,0.648965052271031,1.62942982160506,0,0.505445516867349,0.420883711772948,0.520481771850815,0.689706313300419,1.62055916824814,1.20563854268572,1.29269348387523,0.512454881139399,1.21812241927647,0.258703370739016,2.80238390812695,3.02569728268511,1.93546236580344,2.19195732427575,0.834141747676794,2.089512999133,0.205782136407943,0.59710280045548,0,0,0,2.27838349789052,0.234526059981096,0.720248245844059,1.65721314909647,1.37734962223183,0.462801338662135,0.930135779001631,0.536546802799238,1.5179494507732,0.987359099480883,0.985004784474571,0.56748166682099,0.730999937126662,0.219550115291051,0.268412837520744,3.15434922846191,3.60166143327496,0,0.528901133327089,1.49301775374664,1.16118335930219,1.15980715189884,0.403367049246685,1.33426826306922,0.951128130562796,0.474529061544512,0.658795818896044,0.502670417600539,1.1937388322469,0.779856348476481,0,0.432276099749388,0.398282546508734,1.51734320762465,0.799739588268102,0,0.814605311381257,0.387904974335251,1.54298803758701,0.758838445491087,0.738050739898011,0.627994911365499,0.616985819609003,0,1.00107063429656,0,0,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0.549122826376163,0,1.48856379067401,1.24815069245824,0,0.538192240565737,0.482443521363367,0.554259570499814,1.32643988239339,1.14075483509418,0.339490171550376,0,1.17254380209271,0.476087281772027,1.17080188714679,0.472905432318573,0.8858587585951,1.91345722388985,0.327726629431476,0.345369963731791,1.01254341007058,0,0,0.491764273019036,0.827810238914197,1.12385412991454,1.17211686592203,0.163934945376675,0,0.631016438832513,0.780877488593277,1.50796378412959,0.716906393857656,2.00518806674155,0.566153061577665,1.21443210502468,1.16902343164525,0.790575555893047,1.28528526568723,0,1.24645922567079,1.62886959353576,0.494910368917606,0,1.69946445308487,0.906970670894253,0.754420319023592,0.885905678642318,0,0.258428293168221,0.363533729477506,0,0,0,0,0.680879211507576,1.44048875225048,0.776152102696527,1.50035924522115,2.12808280370728,0.891844088010353,0.987294123612726,0.608929898229199,0.704015124191131,0.42366414172764,0,0,0.322928853391811,0.663442174209714,0.119372344003136,0.492422699235184,0.582961673259701,1.66882771809459,0.170870880797853,0.82554747185289,0.555583582109135,0.188368457004691,0,0,0,0,0,0,1.58167996790568,0.813277868507395,0.648032044930808,0.836353184057875,0,0.404593039154462,0.495920734352016,0.523511883968059,0.129614973291793,0.621339313086926,3.38215763210514,1.04661582230785,0.66183396182839,1.36115831840833,1.03327858782185,0.844780627453891,0.704143431874524,1.17183946359555,0.524296722128554,0.966336483304024,0.576060012515731,0,0.810900861160657,0.616265742988964,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.226730383615211,0.221985953374065,0.807424709485281,0.167884616364078,0.579568782096571,0.563047426353546,0.36630324853453,0.214368379079066,0.501572104035363,0.564751842617067,2.76195141904306,1.14579102687879,1.3748254587495,2.05524755931193,3.0215755895588,0.675022500231806,1.35096360967266,1.35942722695261,1.03552062350364,1.3492355185943,0.399024873401031,1.02440163452481,0.729320151204882,0.838452650511929,0.919217542250071,0.44449345560323,0.618105171716683,0.320919209591815,0.758091635291392,0.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| |||
|short_description=p3@Bcar1 | |||
}} |
Revision as of 23:00, 5 August 2015
Short description: | p3@Bcar1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Bcar1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1355 |
Association with transcript: | -19bp_to_NM_009954, uc009nmu.2_5end |
EntrezGene: | 12927 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.33e-17 | 43 |
CNS neuron (sensu Vertebrata) | 2.15e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.15e-16 | 23 |
ectodermal cell | 3.42e-16 | 44 |
neurectodermal cell | 3.42e-16 | 44 |
neuron | 4.39e-13 | 33 |
neuronal stem cell | 4.39e-13 | 33 |
neuroblast | 4.39e-13 | 33 |
electrically signaling cell | 4.39e-13 | 33 |
electrically responsive cell | 1.82e-12 | 39 |
electrically active cell | 1.82e-12 | 39 |
embryonic cell | 5.91e-11 | 70 |
neuron of cerebral cortex | 2.56e-07 | 6 |