FFCP PHASE1:Mm9::chr3:135354375..135354381,-: Difference between revisions
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{{FFCP|EntrezGene=18033|HGNC=|MCL_coexpression_id=7|UniProt=P25799|association_with_transcript=128bp_to_ENSMUST00000029812_5end|description=CAGE_peak_10_at_Nfkb1_5end|id=chr3:135354375..135354381,-|ontology_enrichment_celltype=CL:0000063!8.08e-11!66;CL:0000838!5.06e-08!12;CL:0000988!7.63e-08!32;CL:0002032!7.63e-08!32;CL:0000037!7.63e-08!32;CL:0000566!7.63e-08!32;CL:0000837!7.63e-08!32;CL:0000791!2.25e-07!9;CL:0000789!2.25e-07!9;CL:0002420!2.25e-07!9;CL:0002419!2.25e-07!9;CL:0000790!2.25e-07!9;CL:0000084!2.41e-07!11;CL:0000827!2.41e-07!11;CL:0002320!4.46e-07!46;CL:0000134!4.46e-07!46;CL:0000542!7.45e-07!13;CL:0000051!7.45e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,4.21e-18,32;CL:0002032,4.21e-18,32;CL:0000037,4.21e-18,32;CL:0000837,4.21e-18,32;CL:0000791,1.00e-16,9;CL:0000789,1.00e-16,9;CL:0002420,1.00e-16,9;CL:0002419,1.00e-16,9;CL:0000790,1.00e-16,9;CL:0000838,5.37e-15,12;CL:0000624,5.67e-15,8;CL:0002031,6.24e-14,25;CL:0002320,8.17e-14,46;CL:0000134,8.17e-14,46;CL:0000542,1.19e-13,13;CL:0000051,1.19e-13,13;CL:0000084,2.70e-13,11;CL:0000827,2.70e-13,11;CL:0000738,4.02e-12,17;CL:0002087,4.02e-12,17;CL:0000893,5.61e-12,6;CL:0002489,5.61e-12,6;CL:0000898,5.61e-12,6;CL:0000809,5.61e-12,6;CL:0000810,5.61e-12,6;CL:0000895,5.61e-12,6;CL:0000808,5.61e-12,6;CL:0000894,5.61e-12,6;CL:0000806,5.61e-12,6;CL:0000807,5.61e-12,6;CL:0000805,5.61e-12,6;CL:0002425,5.61e-12,6;CL:0002436,5.61e-12,6;CL:0002427,5.61e-12,6;CL:0002428,5.61e-12,6;CL:0002429,5.61e-12,6;CL:0002433,5.61e-12,6;CL:0002431,5.61e-12,6;CL:0002432,5.61e-12,6;CL:0000219,6.61e-11,54;CL:0000034,1.12e-08,97;CL:0000723,4.03e-07,91;CL:0000048,4.03e-07,91;CL:0000049,6.33e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!6.05e-14!48;UBERON:0002390!8.36e-13!45;UBERON:0003061!8.36e-13!45;UBERON:0003081!7.23e-10!88;UBERON:0004177!4.97e-09!29;UBERON:0002405!6.33e-09!70;UBERON:0001004!3.33e-08!42;UBERON:0000065!6.07e-08!41;UBERON:0003408!1.49e-07!24;UBERON:0000072!2.02e-07!27;UBERON:0002370!2.70e-07!23;UBERON:0000974!2.70e-07!23;UBERON:0004807!2.70e-07!23;UBERON:0005058!2.70e-07!23;UBERON:0003351!2.70e-07!23;UBERON:0009113!2.70e-07!23;UBERON:0003295!2.70e-07!23;UBERON:0009722!2.70e-07!23;UBERON:0005562!2.70e-07!23;UBERON:0007690!2.70e-07!23;UBERON:0002384!4.46e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.17e-14,46;UBERON:0002193,1.24e-12,48;UBERON:0002405,1.24e-12,48;UBERON:0002390,3.08e-11,45;UBERON:0003061,3.08e-11,45;UBERON:0002204,8.20e-08,32;UBERON:0002371,2.93e-07,16|phase1_expression=0.160148847104794,1.39590163055744,1.81999695755814,0,0.500895729946347,1.00727563147134,0.934450562382103,2.58246646883153,24.3564489322383,27.1514850533512,5.99262888789267,8.05698805852898,1.71200729931206,1.92324885321794,0.666219523631325,1.01237633694913,0,2.20823515750766,2.19383093769182,1.69755860719212,0.0850432901510698,0.893618560807968,0.261199789138935,1.27993938234725,0.45881856213434,2.29692785646008,1.29228598847722,1.07735616342945,0.380046838912748,0,0.443461021310609,0,0,0,0.866554859253824,0.166234645358492,0.408338712524738,2.09265815368454,4.6880120671428,2.09409497589519,1.17646297606203,3.41522742479223,2.91306211818692,0.251793635951155,0.304130793658544,0,0,0.218025156380447,0,0.194429899074283,0.419959264876088,0,3.18786951509699,1.45072428402269,3.02484419228218,0.257259436035947,0.85960031981627,1.54701627683233,0,0,0,0,0,0.899899717281399,1.97773272513395,2.1314403448383,0.599200221036809,0,0.207379224616955,0,0,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0,0,0.45839474333043,0,0,0,0.302904773332736,0.226714680320357,0.289864488701678,0,0.679971333707751,0.539703191637817,0.649776417447669,0.448026887097336,0.842666520790511,0.170430322578058,0,0,0.14084341977668,1.28326477414318,2.54805239706646,0,1.5154372870785,0.506719730950197,0.505524445014783,0.22836775943812,1.29468941823586,0.148442139064825,0,0,0,0.301445281105245,0.23517741427141,0.125666591329675,0.247194967734374,0.86759614151947,2.65383165584962,0.323533699894818,0.441683036920787,0,3.72783522436244,0.292780797011547,0,1.02182822083437,1.1981512450592,1.79970819298022,1.14363204365758,0,0,0,0,0,0.20778804455956,0,0.305518091550949,0.870848794270651,0.758168275301024,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0.431135985865684,0,0,0,0.278047249225598,0,0,0,1.40442637462647,0.772043721344145,1.13665399758237,0,0,0.36012412292203,0,0,0.154267112887378,0.465067889500816,0.536546802799238,0.350296027101508,0,0.492502392237286,0.486412857275134,0.292399974850665,0.658650345873152,0.134206418760372,0,0,0.660837565967596,0.793351699990633,0,0.232236671860439,0.38660238396628,0.403367049246685,0.444756087689741,0.190225626112559,0,0.164698954724011,0.754005626400808,0,0.58489226135736,0.898819408654221,0.216138049874694,0.597423819763102,0,0.228497025219458,0,0.407302655690628,0,0.0701358198903186,0.442655759869801,0.147610147979602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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18033 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P25799 | |||
|association_with_transcript=128bp_to_ENSMUST00000029812_5end | |||
|cluster_id=chr3:135354375..135354381,- | |||
|description=CAGE_peak_10_at_Nfkb1_5end | |||
|id=chr3:135354375..135354381,- | |||
|ontology_enrichment_celltype=CL:0000063!8.08e-11!66;CL:0000838!5.06e-08!12;CL:0000988!7.63e-08!32;CL:0002032!7.63e-08!32;CL:0000037!7.63e-08!32;CL:0000566!7.63e-08!32;CL:0000837!7.63e-08!32;CL:0000791!2.25e-07!9;CL:0000789!2.25e-07!9;CL:0002420!2.25e-07!9;CL:0002419!2.25e-07!9;CL:0000790!2.25e-07!9;CL:0000084!2.41e-07!11;CL:0000827!2.41e-07!11;CL:0002320!4.46e-07!46;CL:0000134!4.46e-07!46;CL:0000542!7.45e-07!13;CL:0000051!7.45e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.21e-18,32;CL:0002032,4.21e-18,32;CL:0000037,4.21e-18,32;CL:0000837,4.21e-18,32;CL:0000791,1.00e-16,9;CL:0000789,1.00e-16,9;CL:0002420,1.00e-16,9;CL:0002419,1.00e-16,9;CL:0000790,1.00e-16,9;CL:0000838,5.37e-15,12;CL:0000624,5.67e-15,8;CL:0002031,6.24e-14,25;CL:0002320,8.17e-14,46;CL:0000134,8.17e-14,46;CL:0000542,1.19e-13,13;CL:0000051,1.19e-13,13;CL:0000084,2.70e-13,11;CL:0000827,2.70e-13,11;CL:0000738,4.02e-12,17;CL:0002087,4.02e-12,17;CL:0000893,5.61e-12,6;CL:0002489,5.61e-12,6;CL:0000898,5.61e-12,6;CL:0000809,5.61e-12,6;CL:0000810,5.61e-12,6;CL:0000895,5.61e-12,6;CL:0000808,5.61e-12,6;CL:0000894,5.61e-12,6;CL:0000806,5.61e-12,6;CL:0000807,5.61e-12,6;CL:0000805,5.61e-12,6;CL:0002425,5.61e-12,6;CL:0002436,5.61e-12,6;CL:0002427,5.61e-12,6;CL:0002428,5.61e-12,6;CL:0002429,5.61e-12,6;CL:0002433,5.61e-12,6;CL:0002431,5.61e-12,6;CL:0002432,5.61e-12,6;CL:0000219,6.61e-11,54;CL:0000034,1.12e-08,97;CL:0000723,4.03e-07,91;CL:0000048,4.03e-07,91;CL:0000049,6.33e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.05e-14!48;UBERON:0002390!8.36e-13!45;UBERON:0003061!8.36e-13!45;UBERON:0003081!7.23e-10!88;UBERON:0004177!4.97e-09!29;UBERON:0002405!6.33e-09!70;UBERON:0001004!3.33e-08!42;UBERON:0000065!6.07e-08!41;UBERON:0003408!1.49e-07!24;UBERON:0000072!2.02e-07!27;UBERON:0002370!2.70e-07!23;UBERON:0000974!2.70e-07!23;UBERON:0004807!2.70e-07!23;UBERON:0005058!2.70e-07!23;UBERON:0003351!2.70e-07!23;UBERON:0009113!2.70e-07!23;UBERON:0003295!2.70e-07!23;UBERON:0009722!2.70e-07!23;UBERON:0005562!2.70e-07!23;UBERON:0007690!2.70e-07!23;UBERON:0002384!4.46e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.17e-14,46;UBERON:0002193,1.24e-12,48;UBERON:0002405,1.24e-12,48;UBERON:0002390,3.08e-11,45;UBERON:0003061,3.08e-11,45;UBERON:0002204,8.20e-08,32;UBERON:0002371,2.93e-07,16 | |||
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|short_description=p10@Nfkb1 | |||
}} |
Revision as of 02:14, 6 August 2015
Short description: | p10@Nfkb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Nfkb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 128bp_to_ENSMUST00000029812_5end |
EntrezGene: | 18033 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.17e-14 | 46 |
hemolymphoid system | 1.24e-12 | 48 |
immune system | 1.24e-12 | 48 |
hematopoietic system | 3.08e-11 | 45 |
blood island | 3.08e-11 | 45 |
musculoskeletal system | 8.20e-08 | 32 |
bone marrow | 2.93e-07 | 16 |