FFCP PHASE1:Mm9::chr13:55050749..55050842,+: Difference between revisions
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{{FFCP|EntrezGene=107448|HGNC=|MCL_coexpression_id=414|UniProt=Q8K1S4|association_with_transcript=0bp_to_ENSMUST00000026994,ENSMUST00000109994,NM_153131,uc007qpp.1,uc007qpq.1_5end|description=CAGE_peak_1_at_Unc5a_5end|id=chr13:55050749..55050842,+|ontology_enrichment_celltype=CL:0000117!1.31e-11!23;CL:0000337!1.31e-11!23;CL:0000540!3.69e-07!33;CL:0000047!3.69e-07!33;CL:0000031!3.69e-07!33;CL:0000404!3.69e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,7.63e-12,23;CL:0000337,7.63e-12,23;CL:0000540,3.48e-07,33;CL:0000047,3.48e-07,33;CL:0000031,3.48e-07,33;CL:0000404,3.48e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.00e-22!71;UBERON:0003075!3.00e-22!71;UBERON:0007284!3.00e-22!71;UBERON:0000033!1.43e-21!63;UBERON:0001049!1.86e-19!52;UBERON:0005068!1.86e-19!52;UBERON:0006241!1.86e-19!52;UBERON:0007135!1.86e-19!52;UBERON:0000955!1.21e-18!50;UBERON:0006238!1.21e-18!50;UBERON:0003056!1.53e-18!49;UBERON:0004121!3.06e-18!102;UBERON:0000924!3.06e-18!102;UBERON:0006601!3.06e-18!102;UBERON:0002616!3.47e-18!49;UBERON:0003080!1.73e-16!40;UBERON:0002780!6.37e-16!39;UBERON:0001890!6.37e-16!39;UBERON:0006240!6.37e-16!39;UBERON:0002020!1.16e-15!34;UBERON:0001017!2.40e-15!73;UBERON:0005743!2.40e-15!73;UBERON:0000073!3.58e-14!75;UBERON:0001016!3.58e-14!75;UBERON:0002791!2.71e-13!29;UBERON:0003528!2.71e-13!29;UBERON:0001893!2.71e-13!29;UBERON:0007811!3.10e-09!86;UBERON:0000956!3.18e-09!21;UBERON:0001869!3.18e-09!21;UBERON:0000203!3.18e-09!21;UBERON:0000475!8.00e-09!200;UBERON:0004111!2.03e-08!122;UBERON:0000468!5.49e-08!333;UBERON:0000153!1.53e-07!94;UBERON:0002021!2.00e-07!10;UBERON:0000411!2.00e-07!10;UBERON:0001950!2.00e-07!10;UBERON:0002619!2.01e-07!17;UBERON:0000025!5.09e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.93e-21,54;UBERON:0002346,5.44e-21,64;UBERON:0003075,5.44e-21,64;UBERON:0007284,5.44e-21,64;UBERON:0001049,5.71e-20,52;UBERON:0005068,5.71e-20,52;UBERON:0006241,5.71e-20,52;UBERON:0007135,5.71e-20,52;UBERON:0010371,1.28e-19,73;UBERON:0003056,7.26e-19,49;UBERON:0000955,2.64e-17,47;UBERON:0006238,2.64e-17,47;UBERON:0002616,7.59e-17,46;UBERON:0003080,9.22e-17,40;UBERON:0004121,1.82e-16,95;UBERON:0000924,1.82e-16,95;UBERON:0006601,1.82e-16,95;UBERON:0002780,3.49e-16,39;UBERON:0001890,3.49e-16,39;UBERON:0006240,3.49e-16,39;UBERON:0010314,3.99e-16,92;UBERON:0002020,6.52e-16,34;UBERON:0001017,7.01e-16,73;UBERON:0001016,1.67e-14,75;UBERON:0003528,1.72e-13,29;UBERON:0002791,1.72e-13,29;UBERON:0001893,1.72e-13,29;UBERON:0000956,2.49e-09,21;UBERON:0001869,2.49e-09,21;UBERON:0000203,2.49e-09,21;UBERON:0004111,1.10e-08,122;UBERON:0002021,1.45e-07,10;UBERON:0000411,1.45e-07,10;UBERON:0001950,1.45e-07,10;UBERON:0002619,1.73e-07,17;UBERON:0000025,3.03e-07,114|phase1_expression=3.20297694209588,0,0,0.60492842261366,0,0.503637815735669,0.700837921786577,0.129123323441576,0.985521055061667,0,0.171217968225505,0,1.02720437958723,0,1.33243904726265,1.21485160433896,0.699561878128147,0,0.548457734422955,1.27316895539409,6.97354979238772,0.198581902401771,0,0,0.22940928106717,0,0,0,0.190023419456374,0.756090389279792,0.221730510655305,0,0,0,0,0.831173226792462,1.83752420636132,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0.139986421625363,0,0.167782606057736,2.17608642603403,2.68875039313971,0.257259436035947,0.286533439938757,0.515672092277442,10.7227724255587,16.398720357433,7.60597684207415,1.35537812827653,1.77858959222228,0,0,0,0.299600110518405,0,14.9313041724208,12.9605700798423,10.5162480675691,15.996455126613,15.0190607847097,8.45186514583183,7.76348315247715,18.3843757322004,35.2370819198044,26.6866536598042,21.1977015893616,14.7712642257817,17.0167017100482,16.1483144872596,24.8472869111229,21.9477417912355,32.6988250242374,25.0434297652618,13.3829379951157,13.9799584368975,0.832988126665025,0.151143120213571,8.11620568364698,2.58127163094416,0,0,0,0,3.08977724289854,0,0,0,2.39433813620357,0,0,0,0.865964164044856,0.253359865475099,1.01104889002957,1.94112595522402,1.55362730188303,11.4300447079915,5.37804512975021,6.69824052286711,3.45923245884088,4.82312449768392,3.29248379979973,8.79666139307728,0.988779870937496,3.61498392299779,8.84610551949874,3.72063754879041,3.97514733228708,3.87900202508178,0,22.2513405728776,21.5730108017859,6.13096932500619,0.599075622529601,0.599902730993408,0.381210681219194,23.5171303865572,36.1425476226715,11.4345460422707,42.5869584471077,39.1244649715406,20.9865925005156,23.8494656709604,1.01839363850316,2.61254638281195,13.8997517138521,32.8289295182899,3.25301107406759,3.44853156650209,4.68161537493908,4.37043971723574,4.96666443804693,6.02134485338794,8.05834831213668,11.3829483125167,0.646703978798527,0.945530400839096,0.527853372491847,3.06874025398605,0.556094498451196,2.78601733217733,0.823128545631774,2.58744546864041,0.702213187313235,0,0.568326998791185,3.10688658803253,2.11073453982987,1.44049649168812,3.31442629819294,1.18058539048442,1.54267112887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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:107448 | |||
|HGNC= | |||
|MCL_coexpression_id=414 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8K1S4 | |||
|association_with_transcript=0bp_to_ENSMUST00000026994,ENSMUST00000109994,NM_153131,uc007qpp.1,uc007qpq.1_5end | |||
|cluster_id=chr13:55050749..55050842,+ | |||
|description=CAGE_peak_1_at_Unc5a_5end | |||
|id=chr13:55050749..55050842,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.31e-11!23;CL:0000337!1.31e-11!23;CL:0000540!3.69e-07!33;CL:0000047!3.69e-07!33;CL:0000031!3.69e-07!33;CL:0000404!3.69e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.63e-12,23;CL:0000337,7.63e-12,23;CL:0000540,3.48e-07,33;CL:0000047,3.48e-07,33;CL:0000031,3.48e-07,33;CL:0000404,3.48e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.00e-22!71;UBERON:0003075!3.00e-22!71;UBERON:0007284!3.00e-22!71;UBERON:0000033!1.43e-21!63;UBERON:0001049!1.86e-19!52;UBERON:0005068!1.86e-19!52;UBERON:0006241!1.86e-19!52;UBERON:0007135!1.86e-19!52;UBERON:0000955!1.21e-18!50;UBERON:0006238!1.21e-18!50;UBERON:0003056!1.53e-18!49;UBERON:0004121!3.06e-18!102;UBERON:0000924!3.06e-18!102;UBERON:0006601!3.06e-18!102;UBERON:0002616!3.47e-18!49;UBERON:0003080!1.73e-16!40;UBERON:0002780!6.37e-16!39;UBERON:0001890!6.37e-16!39;UBERON:0006240!6.37e-16!39;UBERON:0002020!1.16e-15!34;UBERON:0001017!2.40e-15!73;UBERON:0005743!2.40e-15!73;UBERON:0000073!3.58e-14!75;UBERON:0001016!3.58e-14!75;UBERON:0002791!2.71e-13!29;UBERON:0003528!2.71e-13!29;UBERON:0001893!2.71e-13!29;UBERON:0007811!3.10e-09!86;UBERON:0000956!3.18e-09!21;UBERON:0001869!3.18e-09!21;UBERON:0000203!3.18e-09!21;UBERON:0000475!8.00e-09!200;UBERON:0004111!2.03e-08!122;UBERON:0000468!5.49e-08!333;UBERON:0000153!1.53e-07!94;UBERON:0002021!2.00e-07!10;UBERON:0000411!2.00e-07!10;UBERON:0001950!2.00e-07!10;UBERON:0002619!2.01e-07!17;UBERON:0000025!5.09e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.93e-21,54;UBERON:0002346,5.44e-21,64;UBERON:0003075,5.44e-21,64;UBERON:0007284,5.44e-21,64;UBERON:0001049,5.71e-20,52;UBERON:0005068,5.71e-20,52;UBERON:0006241,5.71e-20,52;UBERON:0007135,5.71e-20,52;UBERON:0010371,1.28e-19,73;UBERON:0003056,7.26e-19,49;UBERON:0000955,2.64e-17,47;UBERON:0006238,2.64e-17,47;UBERON:0002616,7.59e-17,46;UBERON:0003080,9.22e-17,40;UBERON:0004121,1.82e-16,95;UBERON:0000924,1.82e-16,95;UBERON:0006601,1.82e-16,95;UBERON:0002780,3.49e-16,39;UBERON:0001890,3.49e-16,39;UBERON:0006240,3.49e-16,39;UBERON:0010314,3.99e-16,92;UBERON:0002020,6.52e-16,34;UBERON:0001017,7.01e-16,73;UBERON:0001016,1.67e-14,75;UBERON:0003528,1.72e-13,29;UBERON:0002791,1.72e-13,29;UBERON:0001893,1.72e-13,29;UBERON:0000956,2.49e-09,21;UBERON:0001869,2.49e-09,21;UBERON:0000203,2.49e-09,21;UBERON:0004111,1.10e-08,122;UBERON:0002021,1.45e-07,10;UBERON:0000411,1.45e-07,10;UBERON:0001950,1.45e-07,10;UBERON:0002619,1.73e-07,17;UBERON:0000025,3.03e-07,114 | |||
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| |||
|short_description=p1@Unc5a | |||
}} |
Revision as of 03:37, 6 August 2015
Short description: | p1@Unc5a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Unc5a_5end |
Coexpression cluster: | MCL_coexpression_mm9:414 |
Association with transcript: | 0bp_to_ENSMUST00000026994, ENSMUST00000109994, NM_153131, uc007qpp.1, uc007qpq.1_5end |
EntrezGene: | 107448 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.63e-12 | 23 |
neuroblast (sensu Vertebrata) | 7.63e-12 | 23 |
neuron | 3.48e-07 | 33 |
neuronal stem cell | 3.48e-07 | 33 |
neuroblast | 3.48e-07 | 33 |
electrically signaling cell | 3.48e-07 | 33 |