FFCP PHASE1:Mm9::chr1:89407123..89407159,-: Difference between revisions
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{{FFCP|EntrezGene=53972|HGNC=|MCL_coexpression_id=288|UniProt=Q8CHT1|association_with_transcript=-186bp_to_ENSMUST00000027477,NM_019867,uc007bwx.2_5end|description=CAGE_peak_5_at_Ngef_5end|id=chr1:89407123..89407159,-|ontology_enrichment_celltype=CL:0000117!1.95e-14!23;CL:0000337!1.95e-14!23;CL:0000540!4.25e-08!33;CL:0000047!4.25e-08!33;CL:0000031!4.25e-08!33;CL:0000404!4.25e-08!33;CL:0002319!2.91e-07!43;CL:0000221!6.78e-07!44;CL:0000133!6.78e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,4.78e-19,23;CL:0000337,4.78e-19,23;CL:0000540,3.85e-12,33;CL:0000047,3.85e-12,33;CL:0000031,3.85e-12,33;CL:0000404,3.85e-12,33;CL:0000393,1.03e-09,39;CL:0000211,1.03e-09,39;CL:0002319,1.76e-08,43;CL:0000221,3.29e-08,44;CL:0000133,3.29e-08,44;CL:0002612,3.75e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!7.00e-23!49;UBERON:0000033!7.33e-23!63;UBERON:0002020!1.44e-22!34;UBERON:0001049!1.10e-20!52;UBERON:0005068!1.10e-20!52;UBERON:0006241!1.10e-20!52;UBERON:0007135!1.10e-20!52;UBERON:0000073!4.64e-20!75;UBERON:0001016!4.64e-20!75;UBERON:0001017!1.53e-19!73;UBERON:0005743!1.53e-19!73;UBERON:0000955!4.51e-19!50;UBERON:0006238!4.51e-19!50;UBERON:0002346!5.51e-19!71;UBERON:0003075!5.51e-19!71;UBERON:0007284!5.51e-19!71;UBERON:0002791!2.01e-18!29;UBERON:0003528!2.01e-18!29;UBERON:0001893!2.01e-18!29;UBERON:0002616!2.49e-18!49;UBERON:0003080!3.29e-18!40;UBERON:0002780!2.15e-17!39;UBERON:0001890!2.15e-17!39;UBERON:0006240!2.15e-17!39;UBERON:0004121!6.06e-17!102;UBERON:0000924!6.06e-17!102;UBERON:0006601!6.06e-17!102;UBERON:0000956!1.39e-14!21;UBERON:0001869!1.39e-14!21;UBERON:0000203!1.39e-14!21;UBERON:0007811!5.55e-14!86;UBERON:0002619!1.98e-12!17;UBERON:0000153!9.90e-12!94;UBERON:0002021!3.37e-10!10;UBERON:0000411!3.37e-10!10;UBERON:0001950!3.37e-10!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.18e-39,34;UBERON:0000073,2.45e-35,54;UBERON:0001049,6.22e-30,52;UBERON:0005068,6.22e-30,52;UBERON:0006241,6.22e-30,52;UBERON:0007135,6.22e-30,52;UBERON:0001017,9.77e-30,73;UBERON:0003528,1.52e-29,29;UBERON:0002791,1.52e-29,29;UBERON:0001893,1.52e-29,29;UBERON:0001016,9.94e-29,75;UBERON:0002619,5.10e-27,17;UBERON:0003080,6.02e-27,40;UBERON:0002780,3.22e-25,39;UBERON:0001890,3.22e-25,39;UBERON:0006240,3.22e-25,39;UBERON:0002346,8.55e-25,64;UBERON:0003075,8.55e-25,64;UBERON:0007284,8.55e-25,64;UBERON:0000956,1.85e-24,21;UBERON:0001869,1.85e-24,21;UBERON:0000203,1.85e-24,21;UBERON:0000955,4.10e-24,47;UBERON:0006238,4.10e-24,47;UBERON:0003056,8.33e-23,49;UBERON:0002616,1.25e-22,46;UBERON:0002021,1.27e-22,10;UBERON:0000411,1.27e-22,10;UBERON:0001950,1.27e-22,10;UBERON:0004121,1.78e-22,95;UBERON:0000924,1.78e-22,95;UBERON:0006601,1.78e-22,95;UBERON:0010371,7.81e-21,73;UBERON:0010314,5.04e-15,92;UBERON:0001948,5.75e-11,5;UBERON:0002315,5.75e-11,5;UBERON:0000025,8.41e-10,114;UBERON:0002240,4.53e-09,6;UBERON:0005174,4.53e-09,6;UBERON:0001137,4.53e-09,6;UBERON:0004111,1.04e-08,122;UBERON:0000369,3.59e-07,5;UBERON:0002435,3.59e-07,5;UBERON:0000204,3.59e-07,5;UBERON:0010082,3.59e-07,5;UBERON:0002257,3.75e-07,3;UBERON:0001954,5.24e-07,7;UBERON:0003022,5.24e-07,7;UBERON:0002421,5.24e-07,7;UBERON:0000349,5.24e-07,7;UBERON:0002600,5.24e-07,7|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,0.633831403506179,0.338844532069132,0,0,0,0,0,0.768436610643109,0.311068836925433,0.675029691658453,0.841299845405528,4.85606673486466,3.75476519617743,1.34739879136449,1.62937300731002,2.75765635983006,1.10115880999389,1.65993539510744,1.53606533256243,0.923204014111357,1.09785172322892,1.04182674111352,0.558365998002762,0,1.37518422999129,3.83017161115768,4.8406371471695,1.86399445825301,0.37863096666592,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.647067399789637,0,0.969750506270444,0,0,0,0,0,0,0,4.94309110035915,16.9275223042892,23.4973638451056,13.0368240144207,13.2972037811772,2.49345653471472,3.89379031362618,0.305518091550949,0.124406970610093,0,0.210441855886474,0.910843100738926,0.919608417733892,1.44049703844279,0.452114453507145,0.95251098811859,0.2562274405697,0.843315521037559,0.776110112217047,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,2.3131894342054,1.02904612379284,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0.476087281772027,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.356737635204141,0,0.608929898229199,0,0,0.220528398054962,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0.339956859987711,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.388902376688095,0.129159823477731,0.506868376472335,0,0.5208175393758,0.209718688851422,0,0,0,0.202725215290164,0.410843828659309,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,11.8597886949584,9.20650473014354,9.73922372846974,9.96748457593388,10.9613203163303,11.3309084608455,8.77529250301348,12.158672487054,10.8754178156209,13.4617681055473,0,0,0,0.486213434136588,0.419226325255965,0.551530525350042,0.222246727801615,0.412070114477788,0.962757628775446,1.01078884705519,0.50695859978048,1.13175804831646,0.468207537349412,0.384150914429216,0.34461281373368,0.476293691283074,0.463537303779422,0.192909220463705,0,0.147198920134397,0.685738504770831,0.532427418478012,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0.365855945745545,0.526139422875686,0.271608227691724,1.12228454331548,1.30498519936592,0.591026894253381,0,0.619747364743864,0.192906610981141,1.99848462350357,0.467863216890817,0.214871054048298,1.3390183244819,0.220591419119515,0.231867835620421|short_description=p5@Ngef}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:53972 | |||
|HGNC= | |||
|MCL_coexpression_id=288 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8CHT1 | |||
|association_with_transcript=-186bp_to_ENSMUST00000027477,NM_019867,uc007bwx.2_5end | |||
|cluster_id=chr1:89407123..89407159,- | |||
|description=CAGE_peak_5_at_Ngef_5end | |||
|id=chr1:89407123..89407159,- | |||
|ontology_enrichment_celltype=CL:0000117!1.95e-14!23;CL:0000337!1.95e-14!23;CL:0000540!4.25e-08!33;CL:0000047!4.25e-08!33;CL:0000031!4.25e-08!33;CL:0000404!4.25e-08!33;CL:0002319!2.91e-07!43;CL:0000221!6.78e-07!44;CL:0000133!6.78e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.78e-19,23;CL:0000337,4.78e-19,23;CL:0000540,3.85e-12,33;CL:0000047,3.85e-12,33;CL:0000031,3.85e-12,33;CL:0000404,3.85e-12,33;CL:0000393,1.03e-09,39;CL:0000211,1.03e-09,39;CL:0002319,1.76e-08,43;CL:0000221,3.29e-08,44;CL:0000133,3.29e-08,44;CL:0002612,3.75e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!7.00e-23!49;UBERON:0000033!7.33e-23!63;UBERON:0002020!1.44e-22!34;UBERON:0001049!1.10e-20!52;UBERON:0005068!1.10e-20!52;UBERON:0006241!1.10e-20!52;UBERON:0007135!1.10e-20!52;UBERON:0000073!4.64e-20!75;UBERON:0001016!4.64e-20!75;UBERON:0001017!1.53e-19!73;UBERON:0005743!1.53e-19!73;UBERON:0000955!4.51e-19!50;UBERON:0006238!4.51e-19!50;UBERON:0002346!5.51e-19!71;UBERON:0003075!5.51e-19!71;UBERON:0007284!5.51e-19!71;UBERON:0002791!2.01e-18!29;UBERON:0003528!2.01e-18!29;UBERON:0001893!2.01e-18!29;UBERON:0002616!2.49e-18!49;UBERON:0003080!3.29e-18!40;UBERON:0002780!2.15e-17!39;UBERON:0001890!2.15e-17!39;UBERON:0006240!2.15e-17!39;UBERON:0004121!6.06e-17!102;UBERON:0000924!6.06e-17!102;UBERON:0006601!6.06e-17!102;UBERON:0000956!1.39e-14!21;UBERON:0001869!1.39e-14!21;UBERON:0000203!1.39e-14!21;UBERON:0007811!5.55e-14!86;UBERON:0002619!1.98e-12!17;UBERON:0000153!9.90e-12!94;UBERON:0002021!3.37e-10!10;UBERON:0000411!3.37e-10!10;UBERON:0001950!3.37e-10!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.18e-39,34;UBERON:0000073,2.45e-35,54;UBERON:0001049,6.22e-30,52;UBERON:0005068,6.22e-30,52;UBERON:0006241,6.22e-30,52;UBERON:0007135,6.22e-30,52;UBERON:0001017,9.77e-30,73;UBERON:0003528,1.52e-29,29;UBERON:0002791,1.52e-29,29;UBERON:0001893,1.52e-29,29;UBERON:0001016,9.94e-29,75;UBERON:0002619,5.10e-27,17;UBERON:0003080,6.02e-27,40;UBERON:0002780,3.22e-25,39;UBERON:0001890,3.22e-25,39;UBERON:0006240,3.22e-25,39;UBERON:0002346,8.55e-25,64;UBERON:0003075,8.55e-25,64;UBERON:0007284,8.55e-25,64;UBERON:0000956,1.85e-24,21;UBERON:0001869,1.85e-24,21;UBERON:0000203,1.85e-24,21;UBERON:0000955,4.10e-24,47;UBERON:0006238,4.10e-24,47;UBERON:0003056,8.33e-23,49;UBERON:0002616,1.25e-22,46;UBERON:0002021,1.27e-22,10;UBERON:0000411,1.27e-22,10;UBERON:0001950,1.27e-22,10;UBERON:0004121,1.78e-22,95;UBERON:0000924,1.78e-22,95;UBERON:0006601,1.78e-22,95;UBERON:0010371,7.81e-21,73;UBERON:0010314,5.04e-15,92;UBERON:0001948,5.75e-11,5;UBERON:0002315,5.75e-11,5;UBERON:0000025,8.41e-10,114;UBERON:0002240,4.53e-09,6;UBERON:0005174,4.53e-09,6;UBERON:0001137,4.53e-09,6;UBERON:0004111,1.04e-08,122;UBERON:0000369,3.59e-07,5;UBERON:0002435,3.59e-07,5;UBERON:0000204,3.59e-07,5;UBERON:0010082,3.59e-07,5;UBERON:0002257,3.75e-07,3;UBERON:0001954,5.24e-07,7;UBERON:0003022,5.24e-07,7;UBERON:0002421,5.24e-07,7;UBERON:0000349,5.24e-07,7;UBERON:0002600,5.24e-07,7 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,0.633831403506179,0.338844532069132,0,0,0,0,0,0.768436610643109,0.311068836925433,0.675029691658453,0.841299845405528,4.85606673486466,3.75476519617743,1.34739879136449,1.62937300731002,2.75765635983006,1.10115880999389,1.65993539510744,1.53606533256243,0.923204014111357,1.09785172322892,1.04182674111352,0.558365998002762,0,1.37518422999129,3.83017161115768,4.8406371471695,1.86399445825301,0.37863096666592,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.647067399789637,0,0.969750506270444,0,0,0,0,0,0,0,4.94309110035915,16.9275223042892,23.4973638451056,13.0368240144207,13.2972037811772,2.49345653471472,3.89379031362618,0.305518091550949,0.124406970610093,0,0.210441855886474,0.910843100738926,0.919608417733892,1.44049703844279,0.452114453507145,0.95251098811859,0.2562274405697,0.843315521037559,0.776110112217047,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,2.3131894342054,1.02904612379284,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0.476087281772027,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.356737635204141,0,0.608929898229199,0,0,0.220528398054962,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0.339956859987711,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.388902376688095,0.129159823477731,0.506868376472335,0,0.5208175393758,0.209718688851422,0,0,0,0.202725215290164,0.410843828659309,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,11.8597886949584,9.20650473014354,9.73922372846974,9.96748457593388,10.9613203163303,11.3309084608455,8.77529250301348,12.158672487054,10.8754178156209,13.4617681055473,0,0,0,0.486213434136588,0.419226325255965,0.551530525350042,0.222246727801615,0.412070114477788,0.962757628775446,1.01078884705519,0.50695859978048,1.13175804831646,0.468207537349412,0.384150914429216,0.34461281373368,0.476293691283074,0.463537303779422,0.192909220463705,0,0.147198920134397,0.685738504770831,0.532427418478012,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0.365855945745545,0.526139422875686,0.271608227691724,1.12228454331548,1.30498519936592,0.591026894253381,0,0.619747364743864,0.192906610981141,1.99848462350357,0.467863216890817,0.214871054048298,1.3390183244819,0.220591419119515,0.231867835620421 | |||
|short_description=p5@Ngef | |||
}} |
Revision as of 03:55, 6 August 2015
Short description: | p5@Ngef |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ngef_5end |
Coexpression cluster: | MCL_coexpression_mm9:288 |
Association with transcript: | -186bp_to_ENSMUST00000027477, NM_019867, uc007bwx.2_5end |
EntrezGene: | 53972 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.78e-19 | 23 |
neuroblast (sensu Vertebrata) | 4.78e-19 | 23 |
neuron | 3.85e-12 | 33 |
neuronal stem cell | 3.85e-12 | 33 |
neuroblast | 3.85e-12 | 33 |
electrically signaling cell | 3.85e-12 | 33 |
electrically responsive cell | 1.03e-09 | 39 |
electrically active cell | 1.03e-09 | 39 |
neural cell | 1.76e-08 | 43 |
ectodermal cell | 3.29e-08 | 44 |
neurectodermal cell | 3.29e-08 | 44 |
neuron of the ventral spinal cord | 3.75e-07 | 3 |