FFCP PHASE1:Mm9::chr1:95196851..95196860,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=453|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:95196851..95196860,+|id=chr1:95196851..95196860,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,4.57e-21,3;CL:0000359,4.57e-21,3;CL:0002539,4.57e-21,3;CL:0000514,4.57e-21,3;CL:0000680,2.45e-18,6;CL:0000187,2.45e-18,6;CL:0000056,2.45e-18,6;CL:0000222,9.09e-16,7;CL:0000355,2.47e-12,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,4.57e-21,3;UBERON:0004237,4.57e-21,3;UBERON:0004695,4.57e-21,3;UBERON:0002111,4.57e-21,3;UBERON:0004178,4.57e-21,3;UBERON:0000947,5.70e-16,4;UBERON:0001637,5.70e-16,4;UBERON:0004573,5.70e-16,4;UBERON:0003509,5.70e-16,4;UBERON:0004571,5.70e-16,4;UBERON:0010191,5.70e-16,4;UBERON:0004572,5.70e-16,4;UBERON:0000055,6.67e-13,5;UBERON:0007500,6.67e-13,5;UBERON:0001981,6.67e-13,5;UBERON:0002049,6.67e-13,5;UBERON:0007798,6.67e-13,5;UBERON:0004537,6.67e-13,5;UBERON:0006965,6.67e-13,5;UBERON:0001134,2.47e-12,9;UBERON:0002036,2.47e-12,9;UBERON:0002385,2.47e-12,9;UBERON:0000486,2.47e-12,9;UBERON:0007503,2.47e-12,9;UBERON:0001015,2.47e-12,9;UBERON:0002329,2.47e-12,9;UBERON:0003082,2.47e-12,9;UBERON:0003059,2.47e-12,9;UBERON:0007282,2.47e-12,9;UBERON:0004290,2.47e-12,9;UBERON:0009618,2.47e-12,9;UBERON:0000383,3.97e-11,10;UBERON:0007524,3.86e-10,11;UBERON:0003077,3.86e-10,11;UBERON:0007285,3.86e-10,11|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,1.4192770370732,1.46837401729345,1.56478268869608,0,0,0.194429899074283,2.51975558925653,0,0,0,0,0,1.14613375975503,0,0.202316460859598,0,0.633831403506179,0,0.889294796111139,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,1.10115880999389,0,0,0,0.0914876436024097,0.52091337055676,0.558365998002762,0.56276261003168,0.45839474333043,0,0.569486723196412,0,0.075726193333184,0.0755715601067855,0,0,0,0.539703191637817,0,0,0,4.26075806445144,1.29893002301434,3.5333957451034,0,3.84979432242953,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0.258937883647172,0.29688427812965,0.173485326766136,0,0,0.301445281105245,0.117588707135705,0.125666591329675,0,0.289198713839823,0,0.485300549842228,0.441683036920787,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0,0,0,0,0.203678727700633,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0.384341160854549,0.281105173679186,0.517406741478031,0,0.945530400839096,0.527853372491847,0.657587197282725,1.11218899690239,0.348252166522167,0,0.796137067273973,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0,0,0,0,0,0.492502392237286,0.0810688095458557,0.292399974850665,0,0,0.210289948564127,0,0,0,0.639864751605702,0.232236671860439,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,1.1270773567308,0.610953983535943,0,0.0701358198903186,0.126473074248515,0,0.31399745568275,0.123397163921801,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0.169745085775188,0.469380496577004,0.167506257441816,0.238043640886014,0.390267295715598,0.157635144106191,0.8858587585951,0.956728611944923,0.983179888294428,0.172684981865896,0.578596234326046,0,0,0,0.275936746304732,0.160550589987792,0,0.983609672260053,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,0,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0.614870295887855,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0,0.36012218806262,0.388076051348264,0.643011105094777,0.177340233642274,0.713475270408282,0.329098041204242,0,0.469343416127421,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0,0.619160603889667,0.925972636848558,0.565105371014073,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.352071715937262,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0.486213434136588,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0.57386499620653,0,0|short_description=p@chr1:95196851..95196860,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=453 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:95196851..95196860,+ | |||
|description=CAGE_peak_at_chr1:95196851..95196860,+ | |||
|id=chr1:95196851..95196860,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.57e-21,3;CL:0000359,4.57e-21,3;CL:0002539,4.57e-21,3;CL:0000514,4.57e-21,3;CL:0000680,2.45e-18,6;CL:0000187,2.45e-18,6;CL:0000056,2.45e-18,6;CL:0000222,9.09e-16,7;CL:0000355,2.47e-12,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,4.57e-21,3;UBERON:0004237,4.57e-21,3;UBERON:0004695,4.57e-21,3;UBERON:0002111,4.57e-21,3;UBERON:0004178,4.57e-21,3;UBERON:0000947,5.70e-16,4;UBERON:0001637,5.70e-16,4;UBERON:0004573,5.70e-16,4;UBERON:0003509,5.70e-16,4;UBERON:0004571,5.70e-16,4;UBERON:0010191,5.70e-16,4;UBERON:0004572,5.70e-16,4;UBERON:0000055,6.67e-13,5;UBERON:0007500,6.67e-13,5;UBERON:0001981,6.67e-13,5;UBERON:0002049,6.67e-13,5;UBERON:0007798,6.67e-13,5;UBERON:0004537,6.67e-13,5;UBERON:0006965,6.67e-13,5;UBERON:0001134,2.47e-12,9;UBERON:0002036,2.47e-12,9;UBERON:0002385,2.47e-12,9;UBERON:0000486,2.47e-12,9;UBERON:0007503,2.47e-12,9;UBERON:0001015,2.47e-12,9;UBERON:0002329,2.47e-12,9;UBERON:0003082,2.47e-12,9;UBERON:0003059,2.47e-12,9;UBERON:0007282,2.47e-12,9;UBERON:0004290,2.47e-12,9;UBERON:0009618,2.47e-12,9;UBERON:0000383,3.97e-11,10;UBERON:0007524,3.86e-10,11;UBERON:0003077,3.86e-10,11;UBERON:0007285,3.86e-10,11 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,1.4192770370732,1.46837401729345,1.56478268869608,0,0,0.194429899074283,2.51975558925653,0,0,0,0,0,1.14613375975503,0,0.202316460859598,0,0.633831403506179,0,0.889294796111139,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,1.10115880999389,0,0,0,0.0914876436024097,0.52091337055676,0.558365998002762,0.56276261003168,0.45839474333043,0,0.569486723196412,0,0.075726193333184,0.0755715601067855,0,0,0,0.539703191637817,0,0,0,4.26075806445144,1.29893002301434,3.5333957451034,0,3.84979432242953,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0.258937883647172,0.29688427812965,0.173485326766136,0,0,0.301445281105245,0.117588707135705,0.125666591329675,0,0.289198713839823,0,0.485300549842228,0.441683036920787,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0,0,0,0,0.203678727700633,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0.384341160854549,0.281105173679186,0.517406741478031,0,0.945530400839096,0.527853372491847,0.657587197282725,1.11218899690239,0.348252166522167,0,0.796137067273973,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0,0,0,0,0,0.492502392237286,0.0810688095458557,0.292399974850665,0,0,0.210289948564127,0,0,0,0.639864751605702,0.232236671860439,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,1.1270773567308,0.610953983535943,0,0.0701358198903186,0.126473074248515,0,0.31399745568275,0.123397163921801,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0.169745085775188,0.469380496577004,0.167506257441816,0.238043640886014,0.390267295715598,0.157635144106191,0.8858587585951,0.956728611944923,0.983179888294428,0.172684981865896,0.578596234326046,0,0,0,0.275936746304732,0.160550589987792,0,0.983609672260053,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,0,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0.614870295887855,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0,0.36012218806262,0.388076051348264,0.643011105094777,0.177340233642274,0.713475270408282,0.329098041204242,0,0.469343416127421,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0,0.619160603889667,0.925972636848558,0.565105371014073,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.352071715937262,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0.486213434136588,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0.57386499620653,0,0 | |||
|short_description=p@chr1:95196851..95196860,+ | |||
}} |
Latest revision as of 05:44, 6 August 2015
Short description: | p@chr1:95196851..95196860, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:95196851..95196860, + |
Coexpression cluster: | MCL_coexpression_mm9:453 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 4.57e-21 | 3 |
vascular associated smooth muscle cell | 4.57e-21 | 3 |
aortic smooth muscle cell | 4.57e-21 | 3 |
smooth muscle myoblast | 4.57e-21 | 3 |
muscle precursor cell | 2.45e-18 | 6 |
muscle cell | 2.45e-18 | 6 |
myoblast | 2.45e-18 | 6 |
mesodermal cell | 9.09e-16 | 7 |
multi-potent skeletal muscle stem cell | 2.47e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 4.57e-21 | 3 |
blood vessel smooth muscle | 4.57e-21 | 3 |
arterial system smooth muscle | 4.57e-21 | 3 |
artery smooth muscle tissue | 4.57e-21 | 3 |
aorta smooth muscle tissue | 4.57e-21 | 3 |
aorta | 5.70e-16 | 4 |
artery | 5.70e-16 | 4 |
systemic artery | 5.70e-16 | 4 |
arterial blood vessel | 5.70e-16 | 4 |
systemic arterial system | 5.70e-16 | 4 |
aortic system | 5.70e-16 | 4 |
arterial system | 5.70e-16 | 4 |
vessel | 6.67e-13 | 5 |
epithelial tube open at both ends | 6.67e-13 | 5 |
blood vessel | 6.67e-13 | 5 |
vasculature | 6.67e-13 | 5 |
vascular system | 6.67e-13 | 5 |
blood vasculature | 6.67e-13 | 5 |
vascular cord | 6.67e-13 | 5 |
skeletal muscle tissue | 2.47e-12 | 9 |
striated muscle tissue | 2.47e-12 | 9 |
muscle tissue | 2.47e-12 | 9 |
multilaminar epithelium | 2.47e-12 | 9 |
epithelial vesicle | 2.47e-12 | 9 |
musculature | 2.47e-12 | 9 |
somite | 2.47e-12 | 9 |
myotome | 2.47e-12 | 9 |
presomitic mesoderm | 2.47e-12 | 9 |
presumptive segmental plate | 2.47e-12 | 9 |
dermomyotome | 2.47e-12 | 9 |
trunk paraxial mesoderm | 2.47e-12 | 9 |
musculature of body | 3.97e-11 | 10 |
dense mesenchyme tissue | 3.86e-10 | 11 |
paraxial mesoderm | 3.86e-10 | 11 |
presumptive paraxial mesoderm | 3.86e-10 | 11 |