FF:11904-125F5: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{f5samples
|id=FF:11904-125F5
|name=immature langerhans cells, donor1
|sample_id=11904
|rna_tube_id=
|rna_box=125
|rna_position=F5
|sample_cell_lot=
|sample_cell_cata...") |
No edit summary |
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| Line 3: | Line 3: | ||
|name=immature langerhans cells, donor1 | |name=immature langerhans cells, donor1 | ||
|sample_id=11904 | |sample_id=11904 | ||
|rna_tube_id= | |rna_tube_id=125F5 | ||
|rna_box=125 | |rna_box=125 | ||
|rna_position=F5 | |rna_position=F5 | ||
| Line 20: | Line 20: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|rna_rin= | |rna_rin= | ||
|rna_od260/230=1. | |rna_od260/230=1.91 | ||
|rna_od260/280=2. | |rna_od260/280=2.07 | ||
|sample_cell_type=langerhans cell | |sample_cell_type=langerhans cell | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 29: | Line 29: | ||
|rna_sample_type=total RNA | |rna_sample_type=total RNA | ||
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0 | |rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0 | ||
|rna_weight_ug=1. | |rna_weight_ug=1.2736 | ||
|rna_concentration=0.12736 | |rna_concentration=0.12736 | ||
|sample_note= | |sample_note= | ||
|profile_hcage=CNhs13537,,, | |profile_hcage=CNhs13537,LSID1029,release012,COMPLETED | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
| Line 40: | Line 40: | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|sample_description= | |sample_description= | ||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 67: | Line 66: | ||
|fonse_treatment= | |fonse_treatment= | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|top_motifs= | |||
}} | }} | ||
Revision as of 17:39, 27 February 2012
| Name: | immature langerhans cells, donor1 |
|---|---|
| Species: | |
| Library ID: | {{{library_id}}} |
| Sample type: | {{{sample_category}}} |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
|
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
{{{is_a}}}
part_of relathionship
{{{part_of}}}
has_quality relathionship
{{{has_quality}}}
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000034 (stem cell)
0000037 (hematopoietic stem cell)
0000048 (multi fate stem cell)
0000049 (common myeloid progenitor)
0000134 (mesenchymal cell)
0000219 (motile cell)
0000255 (eukaryotic cell)
0000451 (dendritic cell)
0000453 (Langerhans cell)
0000548 (animal cell)
0000557 (granulocyte monocyte progenitor cell)
0000566 (angioblastic mesenchymal cell)
0000723 (somatic stem cell)
0000738 (leukocyte)
0000763 (myeloid cell)
0000837 (hematopoietic multipotent progenitor cell)
0000840 (immature conventional dendritic cell)
0000988 (hematopoietic cell)
0000990 (conventional dendritic cell)
0001012 (CD7-negative lymphoid progenitor OR granulocyte monocyte progenitor)
0001014 (CD1a-positive Langerhans cell)
0001016 (immature CD1a-positive Langerhans cell)
0001019 (CD115-positive monocyte OR common dendritic progenitor)
0001029 (common dendritic progenitor)
0002009 (macrophage dendritic cell progenitor)
0002031 (hematopoietic lineage restricted progenitor cell)
0002032 (hematopoietic oligopotent progenitor cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
UBERON: Anatomy
0000061 (anatomical structure)
0000062 (organ)
0000465 (material anatomical entity)
0000467 (anatomical system)
0000468 (multi-cellular organism)
0000479 (tissue)
0000480 (anatomical group)
0000922 (embryo)
0000923 (germ layer)
0000926 (mesoderm)
0001062 (anatomical entity)
0001434 (skeletal system)
0001474 (bone element)
0002050 (embryonic structure)
0002193 (hemolymphoid system)
0002204 (musculoskeletal system)
0002371 (bone marrow)
0002384 (connective tissue)
0002390 (hematopoietic system)
0002405 (immune system)
0002532 (epiblast (generic))
0004120 (mesoderm-derived structure)
0004765 (skeletal element)
0005423 (developing anatomical structure)
FF: FANTOM5
NA
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
