FFCP PHASE2:Mm9::chr4:13670499..13670526,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p2@Runx1t1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Runx1t1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:22 |
| Association with transcript: | 50bp_to_NM_001111026, uc008sau.2_5end |
| EntrezGene: | Runx1t1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@Runx1t1 |
|---|
0
10
20
30
40
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 2.38e-12 | 23 |
| neuroblast (sensu Vertebrata) | 2.38e-12 | 23 |
| neuron | 5.06e-09 | 33 |
| neuronal stem cell | 5.06e-09 | 33 |
| neuroblast | 5.06e-09 | 33 |
| electrically signaling cell | 5.06e-09 | 33 |
| electrically responsive cell | 9.69e-07 | 39 |
| electrically active cell | 9.69e-07 | 39 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| pre-chordal neural plate | 4.13e-18 | 49 |
| neurectoderm | 3.20e-17 | 64 |
| neural plate | 3.20e-17 | 64 |
| presumptive neural plate | 3.20e-17 | 64 |
| ecto-epithelium | 6.87e-17 | 73 |
| gray matter | 1.85e-16 | 34 |
| regional part of nervous system | 9.06e-16 | 54 |
| neural tube | 1.52e-15 | 52 |
| neural rod | 1.52e-15 | 52 |
| future spinal cord | 1.52e-15 | 52 |
Showing 1 to 10 of 36 entries
