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FFCP PHASE1:Mm9::chr4:109015634..109015686,+: Difference between revisions

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|id=chr4:109015634..109015686,+
|id=chr4:109015634..109015686,+
|ontology_enrichment_celltype=CL:0000117!3.76e-14!23;CL:0000337!3.76e-14!23;CL:0000540!5.62e-13!33;CL:0000047!5.62e-13!33;CL:0000031!5.62e-13!33;CL:0000404!5.62e-13!33;CL:0000393!2.24e-10!39;CL:0000211!2.24e-10!39;CL:0000221!5.99e-10!44;CL:0000133!5.99e-10!44;CL:0002319!9.40e-10!43;CL:0000055!1.18e-07!50
|ontology_enrichment_celltype=CL:0000117!3.76e-14!23;CL:0000337!3.76e-14!23;CL:0000540!5.62e-13!33;CL:0000047!5.62e-13!33;CL:0000031!5.62e-13!33;CL:0000404!5.62e-13!33;CL:0000393!2.24e-10!39;CL:0000211!2.24e-10!39;CL:0000221!5.99e-10!44;CL:0000133!5.99e-10!44;CL:0002319!9.40e-10!43;CL:0000055!1.18e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,5.85e-18,23;CL:0000337,5.85e-18,23;CL:0000540,1.61e-13,33;CL:0000047,1.61e-13,33;CL:0000031,1.61e-13,33;CL:0000404,1.61e-13,33;CL:0000393,4.80e-10,39;CL:0000211,4.80e-10,39;CL:0000221,1.47e-08,44;CL:0000133,1.47e-08,44;CL:0002319,2.55e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.32e-28!71;UBERON:0003075!3.32e-28!71;UBERON:0007284!3.32e-28!71;UBERON:0000073!3.50e-28!75;UBERON:0001016!3.50e-28!75;UBERON:0001017!6.70e-28!73;UBERON:0005743!6.70e-28!73;UBERON:0000033!4.82e-27!63;UBERON:0001049!4.42e-26!52;UBERON:0005068!4.42e-26!52;UBERON:0006241!4.42e-26!52;UBERON:0007135!4.42e-26!52;UBERON:0004121!5.25e-26!102;UBERON:0000924!5.25e-26!102;UBERON:0006601!5.25e-26!102;UBERON:0000955!4.98e-25!50;UBERON:0006238!4.98e-25!50;UBERON:0002616!2.78e-24!49;UBERON:0003056!2.95e-24!49;UBERON:0002020!3.22e-21!34;UBERON:0003080!4.12e-21!40;UBERON:0002780!2.24e-20!39;UBERON:0001890!2.24e-20!39;UBERON:0006240!2.24e-20!39;UBERON:0002791!4.84e-18!29;UBERON:0003528!4.84e-18!29;UBERON:0001893!4.84e-18!29;UBERON:0007811!1.25e-13!86;UBERON:0000956!3.83e-13!21;UBERON:0001869!3.83e-13!21;UBERON:0000203!3.83e-13!21;UBERON:0000153!2.54e-11!94;UBERON:0002619!5.75e-11!17;UBERON:0002021!4.05e-09!10;UBERON:0000411!4.05e-09!10;UBERON:0001950!4.05e-09!10
|ontology_enrichment_uberon=UBERON:0002346!3.32e-28!71;UBERON:0003075!3.32e-28!71;UBERON:0007284!3.32e-28!71;UBERON:0000073!3.50e-28!75;UBERON:0001016!3.50e-28!75;UBERON:0001017!6.70e-28!73;UBERON:0005743!6.70e-28!73;UBERON:0000033!4.82e-27!63;UBERON:0001049!4.42e-26!52;UBERON:0005068!4.42e-26!52;UBERON:0006241!4.42e-26!52;UBERON:0007135!4.42e-26!52;UBERON:0004121!5.25e-26!102;UBERON:0000924!5.25e-26!102;UBERON:0006601!5.25e-26!102;UBERON:0000955!4.98e-25!50;UBERON:0006238!4.98e-25!50;UBERON:0002616!2.78e-24!49;UBERON:0003056!2.95e-24!49;UBERON:0002020!3.22e-21!34;UBERON:0003080!4.12e-21!40;UBERON:0002780!2.24e-20!39;UBERON:0001890!2.24e-20!39;UBERON:0006240!2.24e-20!39;UBERON:0002791!4.84e-18!29;UBERON:0003528!4.84e-18!29;UBERON:0001893!4.84e-18!29;UBERON:0007811!1.25e-13!86;UBERON:0000956!3.83e-13!21;UBERON:0001869!3.83e-13!21;UBERON:0000203!3.83e-13!21;UBERON:0000153!2.54e-11!94;UBERON:0002619!5.75e-11!17;UBERON:0002021!4.05e-09!10;UBERON:0000411!4.05e-09!10;UBERON:0001950!4.05e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.01e-33,54;UBERON:0002346,1.82e-33,64;UBERON:0003075,1.82e-33,64;UBERON:0007284,1.82e-33,64;UBERON:0001049,1.15e-31,52;UBERON:0005068,1.15e-31,52;UBERON:0006241,1.15e-31,52;UBERON:0007135,1.15e-31,52;UBERON:0001017,4.83e-31,73;UBERON:0001016,1.22e-29,75;UBERON:0010371,7.83e-29,73;UBERON:0003056,9.45e-29,49;UBERON:0004121,1.22e-28,95;UBERON:0000924,1.22e-28,95;UBERON:0006601,1.22e-28,95;UBERON:0000955,2.32e-27,47;UBERON:0006238,2.32e-27,47;UBERON:0002616,2.01e-26,46;UBERON:0002020,1.77e-25,34;UBERON:0003080,1.28e-24,40;UBERON:0002780,1.11e-23,39;UBERON:0001890,1.11e-23,39;UBERON:0006240,1.11e-23,39;UBERON:0003528,2.31e-21,29;UBERON:0002791,2.31e-21,29;UBERON:0001893,2.31e-21,29;UBERON:0010314,2.14e-19,92;UBERON:0000956,4.98e-15,21;UBERON:0001869,4.98e-15,21;UBERON:0000203,4.98e-15,21;UBERON:0002619,3.31e-12,17;UBERON:0002021,2.09e-11,10;UBERON:0000411,2.09e-11,10;UBERON:0001950,2.09e-11,10;UBERON:0002420,1.67e-07,8;UBERON:0007245,1.67e-07,8;UBERON:0010009,1.67e-07,8;UBERON:0010011,1.67e-07,8;UBERON:0000454,1.67e-07,8;UBERON:0003076,2.18e-07,12;UBERON:0003057,2.18e-07,12
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,21.1757792476164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,11.9366711907163,14.8117474196169,9.50747105259269,0.338844532069132,0,0,0,0,0.299600110518405,0,7.67303131082735,7.96535036156975,5.46844899513593,9.42648248532552,13.9147180799517,9.43179153955146,7.47594673942244,2.75765635983006,56.1590993096882,55.799366743227,53.1478605066602,13.9799464994005,21.4995962465663,19.7947080811569,34.3395088771699,28.7008931116157,41.7139216430692,35.3554302568401,53.8164953420609,25.5367240780662,0.530083353332288,0.604572480854284,0,0,0,0,0,0,3.5111105032938,1.1930122580464,0.779358013808606,1.06001872353102,1.26759077799012,0,0,0,0,0,0,2.8545969929765,0,0.148442139064825,0.346970653532272,0.913396434936424,0.461230994512117,0.753613202763113,1.17588707135705,0,0,0,0,0,0,0,0,40.9893115816166,36.4437269855412,0,0,0,0,53.7748395463313,22.8750301409313,21.3612398591869,86.2168628153691,107.656207536069,46.5445219813415,63.9230576486965,0,0.124406970610093,0,2.52530227063769,1.04096354370163,1.37941262660084,4.50155324513373,2.41127708537144,4.49040894398764,6.66191345481219,5.43470002446427,13.1938719076898,0.431135985865684,0.189106080167819,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,93.3687371624725,34.9875682089567,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0.685491075658373,0,0.203651327845314,0.193952487167626,0.210407459670956,0.316182685621286,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0.37898282354097,0.977789858652155,0.509235257325564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.5596710964597,73.0228807469426,0.163934945376675,0,0.315508219416257,0,0.646270193198397,0.716906393857656,1.55959071857676,1.13230612315533,0,0.584511715822624,1.58115111178609,49.1621614125365,0,0,0,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,1.36175842301515,1.62054984628179,0.258717367565509,1.28602221018955,1.06404140185364,1.96205699362278,2.13913726782757,1.522324745573,0,0,0.441056796109924,0,0,0,0,0.164140899745061,0.291480836629851,48.025153220722,0,0,0,0,0.136694227721025,0,0,0,0,0,0.474503990371703,0.609958401380546,0.324016022465404,0.418176592028937,0,0.404593039154462,0.495920734352016,0.523511883968059,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233753804363138,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,88.6660392908795,98.5096006125358,85.3614315024701,114.62607262324,83.5800674120184,67.2300568676833,74.2524750254986,71.1507501094268,82.4719184351252,70.9331627099993,3.1136204275253,3.99024873401031,5.29274177837816,3.64660075602441,5.65955539095552,3.49302666055027,4.00044110042907,5.76898160268904,3.85103051510178,3.28506375292937,3.04175159868288,3.9611531691076,6.55490552289177,5.8262888688431,6.4902079919843,7.1444053692461,4.98302601562879,5.59436739344745,4.12085900803307,5.7407578852415,5.14303878578123,5.14679837862079,5.00715998889374,4.65108533223451,5.92889096616583,5.49994951295897,7.3171189149109,4.99832451731901,5.43216455383447,6.17256498823512,3.79632057997357,4.43270170690036,5.32000356120596,4.49316839439301,2.50778594275484,7.24450676020043,3.97683734357194,2.36358159453128,2.67803664896381,1.32354851471709,0.927471342481686
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,21.1757792476164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,11.9366711907163,14.8117474196169,9.50747105259269,0.338844532069132,0,0,0,0,0.299600110518405,0,7.67303131082735,7.96535036156975,5.46844899513593,9.42648248532552,13.9147180799517,9.43179153955146,7.47594673942244,2.75765635983006,56.1590993096882,55.799366743227,53.1478605066602,13.9799464994005,21.4995962465663,19.7947080811569,34.3395088771699,28.7008931116157,41.7139216430692,35.3554302568401,53.8164953420609,25.5367240780662,0.530083353332288,0.604572480854284,0,0,0,0,0,0,3.5111105032938,1.1930122580464,0.779358013808606,1.06001872353102,1.26759077799012,0,0,0,0,0,0,2.8545969929765,0,0.148442139064825,0.346970653532272,0.913396434936424,0.461230994512117,0.753613202763113,1.17588707135705,0,0,0,0,0,0,0,0,40.9893115816166,36.4437269855412,0,0,0,0,53.7748395463313,22.8750301409313,21.3612398591869,86.2168628153691,107.656207536069,46.5445219813415,63.9230576486965,0,0.124406970610093,0,2.52530227063769,1.04096354370163,1.37941262660084,4.50155324513373,2.41127708537144,4.49040894398764,6.66191345481219,5.43470002446427,13.1938719076898,0.431135985865684,0.189106080167819,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,93.3687371624725,34.9875682089567,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0.685491075658373,0,0.203651327845314,0.193952487167626,0.210407459670956,0.316182685621286,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0.37898282354097,0.977789858652155,0.509235257325564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.5596710964597,73.0228807469426,0.163934945376675,0,0.315508219416257,0,0.646270193198397,0.716906393857656,1.55959071857676,1.13230612315533,0,0.584511715822624,1.58115111178609,49.1621614125365,0,0,0,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,1.36175842301515,1.62054984628179,0.258717367565509,1.28602221018955,1.06404140185364,1.96205699362278,2.13913726782757,1.522324745573,0,0,0.441056796109924,0,0,0,0,0.164140899745061,0.291480836629851,48.025153220722,0,0,0,0,0.136694227721025,0,0,0,0,0,0.474503990371703,0.609958401380546,0.324016022465404,0.418176592028937,0,0.404593039154462,0.495920734352016,0.523511883968059,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233753804363138,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,88.6660392908795,98.5096006125358,85.3614315024701,114.62607262324,83.5800674120184,67.2300568676833,74.2524750254986,71.1507501094268,82.4719184351252,70.9331627099993,3.1136204275253,3.99024873401031,5.29274177837816,3.64660075602441,5.65955539095552,3.49302666055027,4.00044110042907,5.76898160268904,3.85103051510178,3.28506375292937,3.04175159868288,3.9611531691076,6.55490552289177,5.8262888688431,6.4902079919843,7.1444053692461,4.98302601562879,5.59436739344745,4.12085900803307,5.7407578852415,5.14303878578123,5.14679837862079,5.00715998889374,4.65108533223451,5.92889096616583,5.49994951295897,7.3171189149109,4.99832451731901,5.43216455383447,6.17256498823512,3.79632057997357,4.43270170690036,5.32000356120596,4.49316839439301,2.50778594275484,7.24450676020043,3.97683734357194,2.36358159453128,2.67803664896381,1.32354851471709,0.927471342481686
|short_description=p3@Eps15
|short_description=p3@Eps15
}}
}}

Revision as of 06:02, 14 November 2012

Short description:p3@Eps15
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Eps15_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000030281, NM_001159964, uc008ucg.2_5end
EntrezGene:Eps15
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Eps15

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C311.94
Mouse Granule cells, donor2.CNhs12357.11731-123E314.81
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.67
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.91
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D356.16
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F355.80
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D753.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.50
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D819.79
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E434.34
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I641.71
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D635.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F653.82
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E125.54
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.85
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B240.99
cerebellum, neonate N30.CNhs11135.1395-42I236.44
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A453.77
corpus striatum, adult.CNhs10487.19-21D822.88
corpus striatum, neonate N00.CNhs11226.630-43F121.36
cortex, adult.CNhs10473.12-14D586.22
cortex, neonate N30.CNhs11107.1392-42F2107.66
diencephalon, adult.CNhs10482.20-12F246.54
diencephalon, neonate N30.CNhs11201.1388-42B263.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C94.50
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C64.49
eyeball, neonate N01.CNhs11140.1532-43E76.66
eyeball, neonate N02.CNhs11205.1551-44G85.43
eyeball, neonate N16.CNhs11188.777-19A213.19
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E893.37
hippocampus, neonate N00.CNhs11228.627-43G134.99
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C246.56
medulla oblongata, neonate N30.CNhs11200.1396-42A373.02
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I949.16
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C948.03
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A188.67
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A298.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A385.36
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7114.63
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A483.58
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A567.23
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A674.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A771.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A882.47
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A970.93
whole body, embryo E11.CNhs11014.324-5I83.11
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H25.29
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B15.66
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.93
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.32
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.43
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.49
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I57.24
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.85e-1823
neuroblast (sensu Vertebrata)5.85e-1823
neuron1.61e-1333
neuronal stem cell1.61e-1333
neuroblast1.61e-1333
electrically signaling cell1.61e-1333
electrically responsive cell4.80e-1039
electrically active cell4.80e-1039
ectodermal cell1.47e-0844
neurectodermal cell1.47e-0844
neural cell2.55e-0843

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.01e-3354
neurectoderm1.82e-3364
neural plate1.82e-3364
presumptive neural plate1.82e-3364
neural tube1.15e-3152
neural rod1.15e-3152
future spinal cord1.15e-3152
neural keel1.15e-3152
central nervous system4.83e-3173
nervous system1.22e-2975
ecto-epithelium7.83e-2973
pre-chordal neural plate9.45e-2949
ectoderm-derived structure1.22e-2895
ectoderm1.22e-2895
presumptive ectoderm1.22e-2895
brain2.32e-2747
future brain2.32e-2747
regional part of brain2.01e-2646
gray matter1.77e-2534
anterior neural tube1.28e-2440
regional part of forebrain1.11e-2339
forebrain1.11e-2339
future forebrain1.11e-2339
brain grey matter2.31e-2129
regional part of telencephalon2.31e-2129
telencephalon2.31e-2129
structure with developmental contribution from neural crest2.14e-1992
cerebral cortex4.98e-1521
cerebral hemisphere4.98e-1521
pallium4.98e-1521
regional part of cerebral cortex3.31e-1217
occipital lobe2.09e-1110
visual cortex2.09e-1110
neocortex2.09e-1110
basal ganglion1.67e-078
nuclear complex of neuraxis1.67e-078
aggregate regional part of brain1.67e-078
collection of basal ganglia1.67e-078
cerebral subcortex1.67e-078
posterior neural tube2.18e-0712
chordal neural plate2.18e-0712







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