FFCP PHASE1:Mm9::chr17:56110012..56110026,+: Difference between revisions
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|id=chr17:56110012..56110026,+ | |id=chr17:56110012..56110026,+ | ||
|ontology_enrichment_celltype=CL:0000221!5.27e-18!44;CL:0000133!5.27e-18!44;CL:0002319!1.75e-17!43;CL:0000540!8.71e-16!33;CL:0000047!8.71e-16!33;CL:0000031!8.71e-16!33;CL:0000404!8.71e-16!33;CL:0000117!1.73e-15!23;CL:0000337!1.73e-15!23;CL:0000055!5.56e-13!50;CL:0000393!1.28e-11!39;CL:0000211!1.28e-11!39 | |ontology_enrichment_celltype=CL:0000221!5.27e-18!44;CL:0000133!5.27e-18!44;CL:0002319!1.75e-17!43;CL:0000540!8.71e-16!33;CL:0000047!8.71e-16!33;CL:0000031!8.71e-16!33;CL:0000404!8.71e-16!33;CL:0000117!1.73e-15!23;CL:0000337!1.73e-15!23;CL:0000055!5.56e-13!50;CL:0000393!1.28e-11!39;CL:0000211!1.28e-11!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.46e-23,23;CL:0000337,1.46e-23,23;CL:0000540,1.27e-21,33;CL:0000047,1.27e-21,33;CL:0000031,1.27e-21,33;CL:0000404,1.27e-21,33;CL:0000221,4.57e-20,44;CL:0000133,4.57e-20,44;CL:0002319,3.68e-19,43;CL:0000393,3.82e-17,39;CL:0000211,3.82e-17,39;CL:0002321,1.36e-09,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.66e-31,73;UBERON:0002346,1.62e-30,64;UBERON:0003075,1.62e-30,64;UBERON:0007284,1.62e-30,64;UBERON:0004121,1.63e-30,95;UBERON:0000924,1.63e-30,95;UBERON:0006601,1.63e-30,95;UBERON:0001016,1.27e-29,75;UBERON:0010371,2.24e-28,73;UBERON:0000073,1.22e-26,54;UBERON:0001049,3.84e-24,52;UBERON:0005068,3.84e-24,52;UBERON:0006241,3.84e-24,52;UBERON:0007135,3.84e-24,52;UBERON:0010314,6.09e-20,92;UBERON:0003076,5.26e-17,12;UBERON:0003057,5.26e-17,12;UBERON:0002616,1.07e-16,46;UBERON:0000955,3.60e-16,47;UBERON:0006238,3.60e-16,47;UBERON:0002020,1.97e-15,34;UBERON:0003056,2.85e-15,49;UBERON:0003080,2.79e-11,40;UBERON:0002240,1.73e-10,6;UBERON:0005174,1.73e-10,6;UBERON:0001137,1.73e-10,6;UBERON:0002780,2.60e-10,39;UBERON:0001890,2.60e-10,39;UBERON:0006240,2.60e-10,39;UBERON:0003528,1.29e-09,29;UBERON:0002791,1.29e-09,29;UBERON:0001893,1.29e-09,29;UBERON:0001948,3.16e-09,5;UBERON:0002315,3.16e-09,5;UBERON:0000489,7.26e-09,21;UBERON:0004733,4.06e-08,6;UBERON:0004732,4.06e-08,6;UBERON:0002028,4.06e-08,6;UBERON:0007277,4.06e-08,6;UBERON:0002420,6.60e-07,8;UBERON:0007245,6.60e-07,8;UBERON:0010009,6.60e-07,8;UBERON:0010011,6.60e-07,8;UBERON:0000454,6.60e-07,8 | |||
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| ||
|short_description=p3@Shd | |short_description=p3@Shd | ||
}} | }} |
Revision as of 00:52, 15 November 2012
Short description: | p3@Shd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Shd_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | 107bp_to_NM_001159523, NM_009168, uc008dal.2, uc008dam.2_5end |
EntrezGene: | Shd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.46e-23 | 23 |
neuroblast (sensu Vertebrata) | 1.46e-23 | 23 |
neuron | 1.27e-21 | 33 |
neuronal stem cell | 1.27e-21 | 33 |
neuroblast | 1.27e-21 | 33 |
electrically signaling cell | 1.27e-21 | 33 |
ectodermal cell | 4.57e-20 | 44 |
neurectodermal cell | 4.57e-20 | 44 |
neural cell | 3.68e-19 | 43 |
electrically responsive cell | 3.82e-17 | 39 |
electrically active cell | 3.82e-17 | 39 |
embryonic cell | 1.36e-09 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.