FFCP PHASE1:Hg19::chr5:14440872..14440890,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!3.33e-25!180;CL:0000057!2.34e-18!75;CL:0000680!2.92e-18!57;CL:0000056!2.92e-18!57;CL:0000355!2.92e-18!57;CL:0000183!3.16e-18!59;CL:0000187!6.90e-16!54;CL:0002620!2.46e-13!23;CL:0000393!3.59e-13!60;CL:0000211!3.59e-13!60;CL:0000048!9.84e-12!430;CL:0000723!4.26e-11!436;CL:0000034!2.76e-10!444;CL:0000192!7.97e-10!42;CL:0000514!7.97e-10!42;CL:0000188!1.28e-09!9;CL:0002539!2.10e-09!10;CL:0000359!6.00e-09!32;CL:0002551!2.04e-07!6;CL:0000222!2.66e-07!119;CL:0000630!3.95e-07!9 | |ontology_enrichment_celltype=CL:0000055!3.33e-25!180;CL:0000057!2.34e-18!75;CL:0000680!2.92e-18!57;CL:0000056!2.92e-18!57;CL:0000355!2.92e-18!57;CL:0000183!3.16e-18!59;CL:0000187!6.90e-16!54;CL:0002620!2.46e-13!23;CL:0000393!3.59e-13!60;CL:0000211!3.59e-13!60;CL:0000048!9.84e-12!430;CL:0000723!4.26e-11!436;CL:0000034!2.76e-10!444;CL:0000192!7.97e-10!42;CL:0000514!7.97e-10!42;CL:0000188!1.28e-09!9;CL:0002539!2.10e-09!10;CL:0000359!6.00e-09!32;CL:0002551!2.04e-07!6;CL:0000222!2.66e-07!119;CL:0000630!3.95e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002539;7.11e-14;10!CL:0002582;8.49e-14;3!CL:0000708;1.50e-13;3!CL:0000188;1.10e-10;9!CL:0000359;4.32e-10;32!CL:0000569;5.36e-10;4!CL:0002549;6.54e-10;2!CL:0002583;1.14e-09;2!CL:0002334;7.43e-09;12!CL:0000187;3.01e-08;55 | |ontology_enrichment_celltype_v019=CL:0002539;7.11e-14;10!CL:0002582;8.49e-14;3!CL:0000708;1.50e-13;3!CL:0000188;1.10e-10;9!CL:0000359;4.32e-10;32!CL:0000569;5.36e-10;4!CL:0002549;6.54e-10;2!CL:0002583;1.14e-09;2!CL:0002334;7.43e-09;12!CL:0000187;3.01e-08;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0002539,3.54e-14,10;CL:0002582,6.91e-14,3;CL:0000680,7.43e-14,58;CL:0000056,7.43e-14,58;CL:0000355,7.43e-14,58;CL:0000708,1.01e-13,3;CL:0000187,6.07e-13,55;CL:0000048,1.42e-11,427;CL:0000393,2.42e-11,61;CL:0000211,2.42e-11,61;CL:0000723,2.80e-11,433;CL:0000034,6.75e-11,441;CL:0000359,8.90e-11,32;CL:0000188,9.61e-11,9;CL:0000569,5.90e-10,4;CL:0000011,5.90e-10,4;CL:0002549,6.56e-10,2;CL:0002583,1.05e-09,2;CL:0002334,6.63e-09,12;CL:0000192,1.53e-07,43;CL:0000514,1.53e-07,43;CL:0000057,1.54e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000011;5.36e-10;4!CL:0000355;1.07e-07;58 | |ontology_enrichment_development_v019=CL:0000011;5.36e-10;4!CL:0000355;1.07e-07;58 | ||
|ontology_enrichment_disease=DOID:2394!4.95e-10!14 | |ontology_enrichment_disease=DOID:2394!4.95e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;3.67e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;3.67e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,3.48e-07,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002385;1.42e-15;31!UBERON:0001015;1.42e-15;31!UBERON:0000383;1.42e-15;31!UBERON:0004237;7.11e-14;10!UBERON:0004695;7.11e-14;10!UBERON:0002111;7.11e-14;10!UBERON:0004178;7.11e-14;10!UBERON:0005284;1.35e-13;5!UBERON:0003210;1.50e-13;3!UBERON:0005629;6.54e-10;2!UBERON:0005358;6.54e-10;2!UBERON:0001886;6.54e-10;2!UBERON:0004086;6.54e-10;2!UBERON:0005282;6.54e-10;2!UBERON:0005281;6.54e-10;2!UBERON:0002119;1.14e-09;4!UBERON:0001135;4.82e-09;15!UBERON:0000947;1.78e-08;21!UBERON:0010191;1.78e-08;21!UBERON:0004573;3.01e-08;33!UBERON:0004571;3.01e-08;33!UBERON:0001134;3.06e-08;16!UBERON:0002036;3.06e-08;16!UBERON:0002072;4.28e-08;5!UBERON:0000992;9.73e-08;13!UBERON:0002067;4.11e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002385;1.42e-15;31!UBERON:0001015;1.42e-15;31!UBERON:0000383;1.42e-15;31!UBERON:0004237;7.11e-14;10!UBERON:0004695;7.11e-14;10!UBERON:0002111;7.11e-14;10!UBERON:0004178;7.11e-14;10!UBERON:0005284;1.35e-13;5!UBERON:0003210;1.50e-13;3!UBERON:0005629;6.54e-10;2!UBERON:0005358;6.54e-10;2!UBERON:0001886;6.54e-10;2!UBERON:0004086;6.54e-10;2!UBERON:0005282;6.54e-10;2!UBERON:0005281;6.54e-10;2!UBERON:0002119;1.14e-09;4!UBERON:0001135;4.82e-09;15!UBERON:0000947;1.78e-08;21!UBERON:0010191;1.78e-08;21!UBERON:0004573;3.01e-08;33!UBERON:0004571;3.01e-08;33!UBERON:0001134;3.06e-08;16!UBERON:0002036;3.06e-08;16!UBERON:0002072;4.28e-08;5!UBERON:0000992;9.73e-08;13!UBERON:0002067;4.11e-07;9 | ||
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| ||
|short_description=p13@TRIO | |short_description=p13@TRIO | ||
}} | }} |
Revision as of 07:47, 18 November 2012
Short description: | p13@TRIO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_TRIO_5end |
Coexpression cluster: | C950_liposarcoma_extraskeletal_Fibroblast_Smooth_Preadipocyte_neuroblastoma_mesenchymal |
Association with transcript: | -37bp_to_ENST00000515710, uc003jfi.1_5end |
EntrezGene: | TRIO |
HGNC: | 12303 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 3.54e-14 | 10 |
visceral preadipocyte | 6.91e-14 | 3 |
muscle precursor cell | 7.43e-14 | 58 |
myoblast | 7.43e-14 | 58 |
multi-potent skeletal muscle stem cell | 7.43e-14 | 58 |
leptomeningeal cell | 1.01e-13 | 3 |
muscle cell | 6.07e-13 | 55 |
multi fate stem cell | 1.42e-11 | 427 |
electrically responsive cell | 2.42e-11 | 61 |
electrically active cell | 2.42e-11 | 61 |
somatic stem cell | 2.80e-11 | 433 |
stem cell | 6.75e-11 | 441 |
vascular associated smooth muscle cell | 8.90e-11 | 32 |
cell of skeletal muscle | 9.61e-11 | 9 |
cardiac mesenchymal cell | 5.90e-10 | 4 |
migratory trunk neural crest cell | 5.90e-10 | 4 |
fibroblast of choroid plexus | 6.56e-10 | 2 |
subcutaneous preadipocyte | 1.05e-09 | 2 |
preadipocyte | 6.63e-09 | 12 |
smooth muscle cell | 1.53e-07 | 43 |
smooth muscle myoblast | 1.53e-07 | 43 |
fibroblast | 1.54e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.48e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.