FFCP PHASE1:Hg19::chr11:89224667..89224681,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=50507|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7891|TSSclassifier=S|UniProt=Q9NPH5,E7EMD7|association_with_transcript=-14bp_to_ENST00000263317,ENST00000535633,NM_001143836,NM_016931,NR_026571,uc001pct.2,uc001pcu.2,uc001pcv.2,uc001pcw.2,uc001pcx.2,uc001pcy.2,uc009yvo.2,uc009yvp.2,uc009yvs.1,uc010rtu.1_5end|coexpression_cluster_id=C1648|description=CAGE_peak_2_at_NOX4_5end|id=chr11:89224667..89224681,-|ontology_enrichment_celltype=CL:0002139!1.30e-21!24;CL:0000115!5.88e-17!35;CL:0000071!6.84e-17!18;CL:0002546!6.84e-17!18;CL:0000222!4.12e-14!119;CL:0000359!8.81e-13!32;CL:0000055!1.64e-12!180;CL:0002078!4.48e-12!44;CL:0000183!7.40e-10!59;CL:1000413!2.11e-09!9;CL:0000393!2.18e-09!60;CL:0000211!2.18e-09!60;CL:0000192!2.26e-09!42;CL:0000514!2.26e-09!42;CL:0000187!6.26e-09!54;CL:0002321!9.20e-09!248;CL:0000680!1.45e-08!57;CL:0000056!1.45e-08!57;CL:0000355!1.45e-08!57;CL:0000220!1.70e-08!246;CL:0002539!2.55e-08!10;CL:0000213!2.92e-07!57;CL:0000215!2.92e-07!57;CL:0000325!5.50e-07!39;CL:0002544!8.17e-07!6|ontology_enrichment_celltype_v019=CL:0002139;7.69e-44;24!CL:0000071;7.69e-34;18!CL:0000115;1.98e-33;36!CL:0002078;3.38e-19;45!CL:1000413;4.87e-18;9!CL:0000213;6.47e-14;58!CL:0000215;6.47e-14;58!CL:0002544;1.21e-12;6!CL:0000359;2.35e-12;32!CL:0002543;2.59e-12;6!CL:0002138;1.72e-11;6!CL:0002539;1.76e-11;10!CL:0002594;1.36e-08;4!CL:0000306;7.11e-08;4!CL:0002222;7.11e-08;4!CL:0002224;7.11e-08;4!CL:0000064;1.32e-07;3!CL:0000067;1.32e-07;3!CL:0005012;1.32e-07;3!CL:0002304;1.32e-07;3!CL:0002615;1.69e-07;3!CL:0002605;4.19e-07;3!CL:0002144;9.66e-07;3|ontology_enrichment_celltype_v019_2=CL:0002139,4.50e-44,24;CL:0000115,1.44e-39,36;CL:0000071,5.07e-34,18;CL:0002546,5.07e-34,18;CL:0002078,8.66e-30,45;CL:0000222,7.80e-22,121;CL:0000213,4.32e-21,58;CL:0000215,4.32e-21,58;CL:1000413,3.95e-18,9;CL:0000359,2.49e-13,32;CL:0002544,1.12e-12,6;CL:0002543,2.39e-12,6;CL:0002539,1.45e-11,10;CL:0005020,1.53e-11,6;CL:0002138,1.53e-11,6;CL:0005022,1.53e-11,6;CL:0002321,9.98e-11,250;CL:0000192,8.85e-09,43;CL:0000514,8.85e-09,43;CL:0002594,1.31e-08,4;CL:0000306,8.67e-08,4;CL:0002222,8.67e-08,4;CL:0002224,8.67e-08,4;CL:0000064,1.31e-07,3;CL:0000067,1.31e-07,3;CL:0005012,1.31e-07,3;CL:0002304,1.31e-07,3;CL:0002615,1.79e-07,3;CL:0002605,4.24e-07,3;CL:0002144,8.53e-07,3|ontology_enrichment_development_v019=CL:0002546;7.69e-34;18!CL:0005022;1.72e-11;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002049!6.55e-36!79;UBERON:0007798!6.55e-36!79;UBERON:0000055!1.85e-33!69;UBERON:0001981!2.43e-31!60;UBERON:0007500!2.43e-31!60;UBERON:0004537!2.43e-31!60;UBERON:0006965!2.43e-31!60;UBERON:0004872!3.20e-29!84;UBERON:0004535!1.89e-27!110;UBERON:0001009!5.61e-27!113;UBERON:0003914!4.60e-22!118;UBERON:0001637!1.63e-20!42;UBERON:0003509!1.63e-20!42;UBERON:0004572!1.63e-20!42;UBERON:0001986!6.84e-17!18;UBERON:0004638!6.84e-17!18;UBERON:0004852!6.84e-17!18;UBERON:0000025!1.28e-16!194;UBERON:0004111!1.33e-15!241;UBERON:0000477!2.01e-15!286;UBERON:0004573!2.55e-15!33;UBERON:0004571!2.55e-15!33;UBERON:0000119!4.12e-15!312;UBERON:0000487!1.15e-14!22;UBERON:0000483!3.34e-14!309;UBERON:0000947!1.08e-12!21;UBERON:0010191!1.08e-12!21;UBERON:0000490!2.04e-12!138;UBERON:0006914!6.95e-12!25;UBERON:0003915!2.11e-09!9;UBERON:0004700!2.11e-09!9;UBERON:0001917!2.11e-09!9;UBERON:0001134!1.12e-08!61;UBERON:0002036!1.12e-08!61;UBERON:0003082!1.12e-08!61;UBERON:0000468!1.39e-08!659;UBERON:0000475!1.94e-08!365;UBERON:0004237!2.55e-08!10;UBERON:0004695!2.55e-08!10;UBERON:0002111!2.55e-08!10;UBERON:0004178!2.55e-08!10;UBERON:0000914!2.75e-08!83;UBERON:0002329!2.75e-08!83;UBERON:0003077!2.75e-08!83;UBERON:0003059!2.75e-08!83;UBERON:0007282!2.75e-08!83;UBERON:0009618!2.75e-08!83;UBERON:0007285!2.75e-08!83;UBERON:0007625!2.91e-08!11;UBERON:0002385!4.88e-08!63;UBERON:0001015!4.88e-08!63;UBERON:0000383!4.88e-08!63;UBERON:0004290!6.57e-08!70;UBERON:0001638!1.02e-07!9;UBERON:0003920!1.02e-07!9;UBERON:0004582!1.02e-07!9|ontology_enrichment_uberon_v019=UBERON:0004638;7.69e-34;18!UBERON:0001986;7.69e-34;18!UBERON:0004852;7.69e-34;18!UBERON:0000487;1.20e-26;22!UBERON:0006914;8.93e-23;25!UBERON:0000055;1.94e-22;65!UBERON:0000490;1.03e-21;33!UBERON:0002049;6.20e-21;75!UBERON:0007798;6.20e-21;75!UBERON:0001637;1.01e-20;42!UBERON:0003509;1.01e-20;42!UBERON:0004572;1.01e-20;42!UBERON:0007500;1.46e-20;56!UBERON:0001981;1.46e-20;56!UBERON:0004537;1.46e-20;56!UBERON:0000947;1.58e-18;21!UBERON:0010191;1.58e-18;21!UBERON:0004573;4.82e-18;33!UBERON:0004571;4.82e-18;33!UBERON:0003915;4.87e-18;9!UBERON:0004700;4.87e-18;9!UBERON:0001917;4.87e-18;9!UBERON:0007625;1.87e-16;11!UBERON:0003914;6.34e-16;74!UBERON:0004535;1.73e-11;109!UBERON:0004237;1.76e-11;10!UBERON:0004695;1.76e-11;10!UBERON:0002111;1.76e-11;10!UBERON:0004178;1.76e-11;10!UBERON:0000025;4.94e-10;93!UBERON:0010260;5.59e-10;9!UBERON:0001009;1.18e-09;112!UBERON:0003688;2.41e-09;6!UBERON:00023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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=50507 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7891 | |||
|TSSclassifier=S | |||
|UniProt=Q9NPH5,E7EMD7 | |||
|association_with_transcript=-14bp_to_ENST00000263317,ENST00000535633,NM_001143836,NM_016931,NR_026571,uc001pct.2,uc001pcu.2,uc001pcv.2,uc001pcw.2,uc001pcx.2,uc001pcy.2,uc009yvo.2,uc009yvp.2,uc009yvs.1,uc010rtu.1_5end | |||
|coexpression_cluster_id=C1648 | |||
|description=CAGE_peak_2_at_NOX4_5end | |||
|id=chr11:89224667..89224681,- | |||
|ontology_enrichment_celltype=CL:0002139!1.30e-21!24;CL:0000115!5.88e-17!35;CL:0000071!6.84e-17!18;CL:0002546!6.84e-17!18;CL:0000222!4.12e-14!119;CL:0000359!8.81e-13!32;CL:0000055!1.64e-12!180;CL:0002078!4.48e-12!44;CL:0000183!7.40e-10!59;CL:1000413!2.11e-09!9;CL:0000393!2.18e-09!60;CL:0000211!2.18e-09!60;CL:0000192!2.26e-09!42;CL:0000514!2.26e-09!42;CL:0000187!6.26e-09!54;CL:0002321!9.20e-09!248;CL:0000680!1.45e-08!57;CL:0000056!1.45e-08!57;CL:0000355!1.45e-08!57;CL:0000220!1.70e-08!246;CL:0002539!2.55e-08!10;CL:0000213!2.92e-07!57;CL:0000215!2.92e-07!57;CL:0000325!5.50e-07!39;CL:0002544!8.17e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.69e-44;24!CL:0000071;7.69e-34;18!CL:0000115;1.98e-33;36!CL:0002078;3.38e-19;45!CL:1000413;4.87e-18;9!CL:0000213;6.47e-14;58!CL:0000215;6.47e-14;58!CL:0002544;1.21e-12;6!CL:0000359;2.35e-12;32!CL:0002543;2.59e-12;6!CL:0002138;1.72e-11;6!CL:0002539;1.76e-11;10!CL:0002594;1.36e-08;4!CL:0000306;7.11e-08;4!CL:0002222;7.11e-08;4!CL:0002224;7.11e-08;4!CL:0000064;1.32e-07;3!CL:0000067;1.32e-07;3!CL:0005012;1.32e-07;3!CL:0002304;1.32e-07;3!CL:0002615;1.69e-07;3!CL:0002605;4.19e-07;3!CL:0002144;9.66e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.50e-44,24;CL:0000115,1.44e-39,36;CL:0000071,5.07e-34,18;CL:0002546,5.07e-34,18;CL:0002078,8.66e-30,45;CL:0000222,7.80e-22,121;CL:0000213,4.32e-21,58;CL:0000215,4.32e-21,58;CL:1000413,3.95e-18,9;CL:0000359,2.49e-13,32;CL:0002544,1.12e-12,6;CL:0002543,2.39e-12,6;CL:0002539,1.45e-11,10;CL:0005020,1.53e-11,6;CL:0002138,1.53e-11,6;CL:0005022,1.53e-11,6;CL:0002321,9.98e-11,250;CL:0000192,8.85e-09,43;CL:0000514,8.85e-09,43;CL:0002594,1.31e-08,4;CL:0000306,8.67e-08,4;CL:0002222,8.67e-08,4;CL:0002224,8.67e-08,4;CL:0000064,1.31e-07,3;CL:0000067,1.31e-07,3;CL:0005012,1.31e-07,3;CL:0002304,1.31e-07,3;CL:0002615,1.79e-07,3;CL:0002605,4.24e-07,3;CL:0002144,8.53e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;7.69e-34;18!CL:0005022;1.72e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!6.55e-36!79;UBERON:0007798!6.55e-36!79;UBERON:0000055!1.85e-33!69;UBERON:0001981!2.43e-31!60;UBERON:0007500!2.43e-31!60;UBERON:0004537!2.43e-31!60;UBERON:0006965!2.43e-31!60;UBERON:0004872!3.20e-29!84;UBERON:0004535!1.89e-27!110;UBERON:0001009!5.61e-27!113;UBERON:0003914!4.60e-22!118;UBERON:0001637!1.63e-20!42;UBERON:0003509!1.63e-20!42;UBERON:0004572!1.63e-20!42;UBERON:0001986!6.84e-17!18;UBERON:0004638!6.84e-17!18;UBERON:0004852!6.84e-17!18;UBERON:0000025!1.28e-16!194;UBERON:0004111!1.33e-15!241;UBERON:0000477!2.01e-15!286;UBERON:0004573!2.55e-15!33;UBERON:0004571!2.55e-15!33;UBERON:0000119!4.12e-15!312;UBERON:0000487!1.15e-14!22;UBERON:0000483!3.34e-14!309;UBERON:0000947!1.08e-12!21;UBERON:0010191!1.08e-12!21;UBERON:0000490!2.04e-12!138;UBERON:0006914!6.95e-12!25;UBERON:0003915!2.11e-09!9;UBERON:0004700!2.11e-09!9;UBERON:0001917!2.11e-09!9;UBERON:0001134!1.12e-08!61;UBERON:0002036!1.12e-08!61;UBERON:0003082!1.12e-08!61;UBERON:0000468!1.39e-08!659;UBERON:0000475!1.94e-08!365;UBERON:0004237!2.55e-08!10;UBERON:0004695!2.55e-08!10;UBERON:0002111!2.55e-08!10;UBERON:0004178!2.55e-08!10;UBERON:0000914!2.75e-08!83;UBERON:0002329!2.75e-08!83;UBERON:0003077!2.75e-08!83;UBERON:0003059!2.75e-08!83;UBERON:0007282!2.75e-08!83;UBERON:0009618!2.75e-08!83;UBERON:0007285!2.75e-08!83;UBERON:0007625!2.91e-08!11;UBERON:0002385!4.88e-08!63;UBERON:0001015!4.88e-08!63;UBERON:0000383!4.88e-08!63;UBERON:0004290!6.57e-08!70;UBERON:0001638!1.02e-07!9;UBERON:0003920!1.02e-07!9;UBERON:0004582!1.02e-07!9 | |||
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| |||
|short_description=p2@NOX4 | |||
}} |
Revision as of 20:07, 10 September 2013
Short description: | p2@NOX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_NOX4_5end |
Coexpression cluster: | C1648_Adipocyte_Ciliary_Endothelial_Smooth_aorta_kidney_hepatic |
Association with transcript: | -14bp_to_ENST00000263317, ENST00000535633, NM_001143836, NM_016931, NR_026571, uc001pct.2, uc001pcu.2, uc001pcv.2, uc001pcw.2, uc001pcx.2, uc001pcy.2, uc009yvo.2, uc009yvp.2, uc009yvs.1, uc010rtu.1_5end |
EntrezGene: | NOX4 |
HGNC: | 7891 |
UniProt: | Q9NPH5E7EMD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.