FFCP PHASE1:Hg19::chr14:22005343..22005364,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6297|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10526|TSSclassifier=S|UniProt=Q9Y467|association_with_transcript=0bp_to_ENST00000327430_5end|coexpression_cluster_id=C49|description=CAGE_peak_5_at_SALL2_5end|id=chr14:22005343..22005364,-|ontology_enrichment_celltype=CL:0002322!4.57e-14!5;CL:0000047!5.60e-08!8;CL:0000540!3.01e-07!6;CL:0000031!3.01e-07!6;CL:0000404!3.01e-07!6|ontology_enrichment_celltype_v019=CL:0002322;5.48e-22;5!CL:0002321;6.88e-10;15!CL:0000540;2.92e-07;6!CL:0000404;2.92e-07;6|ontology_enrichment_celltype_v019_2=CL:0002322,5.18e-22,5;CL:0000047,7.94e-09,8;CL:0000540,2.92e-07,6;CL:0000031,2.92e-07,6;CL:0000404,2.92e-07,6|ontology_enrichment_development_v019=UBERON:0006601;2.65e-15;82!UBERON:0006241;4.15e-13;3!UBERON:0003057;4.15e-13;3!CL:0000031;2.92e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.38e-81!57;UBERON:0005068!1.38e-81!57;UBERON:0006241!1.38e-81!57;UBERON:0007135!1.38e-81!57;UBERON:0001017!2.16e-78!82;UBERON:0005743!6.41e-77!86;UBERON:0000073!2.80e-71!94;UBERON:0001016!2.80e-71!94;UBERON:0002616!2.50e-67!59;UBERON:0002780!1.96e-65!41;UBERON:0001890!1.96e-65!41;UBERON:0006240!1.96e-65!41;UBERON:0000955!7.98e-64!69;UBERON:0006238!7.98e-64!69;UBERON:0003080!1.16e-63!42;UBERON:0002346!4.77e-59!90;UBERON:0003075!5.20e-57!86;UBERON:0007284!5.20e-57!86;UBERON:0002020!2.12e-54!34;UBERON:0003528!2.12e-54!34;UBERON:0001893!2.44e-54!34;UBERON:0002791!2.84e-52!33;UBERON:0001869!3.96e-50!32;UBERON:0003056!9.43e-46!61;UBERON:0007023!1.96e-41!115;UBERON:0000924!1.13e-36!173;UBERON:0006601!1.13e-36!173;UBERON:0000956!1.14e-35!25;UBERON:0000203!1.14e-35!25;UBERON:0000033!2.41e-35!123;UBERON:0004121!9.51e-35!169;UBERON:0002619!8.80e-34!22;UBERON:0000153!4.28e-33!129;UBERON:0007811!4.28e-33!129;UBERON:0001950!1.49e-29!20;UBERON:0002308!1.87e-20!9;UBERON:0000125!1.87e-20!9;UBERON:0003076!3.29e-18!15;UBERON:0003057!3.29e-18!15;UBERON:0000025!6.60e-17!194;UBERON:0002420!3.64e-16!9;UBERON:0007245!3.64e-16!9;UBERON:0010009!3.64e-16!9;UBERON:0010011!3.64e-16!9;UBERON:0000454!3.64e-16!9;UBERON:0009663!5.40e-16!7;UBERON:0002298!1.38e-14!8;UBERON:0000200!1.00e-13!6;UBERON:0001894!3.61e-12!7;UBERON:0006222!3.61e-12!7;UBERON:0004733!4.07e-12!12;UBERON:0002028!4.07e-12!12;UBERON:0007277!4.07e-12!12;UBERON:0004111!6.67e-12!241;UBERON:0004732!4.58e-11!13;UBERON:0001871!1.24e-10!7;UBERON:0000369!4.34e-10!4;UBERON:0002435!4.34e-10!4;UBERON:0000204!4.34e-10!4;UBERON:0010082!4.34e-10!4;UBERON:0000477!2.39e-09!286;UBERON:0000483!8.70e-09!309;UBERON:0000349!1.38e-08!5;UBERON:0000119!1.39e-08!312;UBERON:0001896!1.48e-08!3;UBERON:0002240!1.48e-08!3;UBERON:0005290!1.48e-08!3;UBERON:0010096!1.48e-08!3;UBERON:0002021!2.98e-08!5;UBERON:0000988!3.43e-08!3;UBERON:0006331!6.13e-08!3;UBERON:0001872!6.46e-08!5;UBERON:0005383!8.99e-08!3;UBERON:0005382!8.99e-08!3;UBERON:0002771!1.09e-07!3;UBERON:0000475!1.50e-07!365;UBERON:0000064!1.60e-07!219;UBERON:0000922!2.29e-07!612|ontology_enrichment_uberon_v019=UBERON:0002780;2.82e-36;41!UBERON:0001890;2.82e-36;41!UBERON:0000073;3.21e-34;53!UBERON:0002616;3.21e-34;53!UBERON:0001893;1.35e-32;34!UBERON:0001869;1.00e-31;32!UBERON:0002619;2.94e-30;22!UBERON:0002791;1.42e-28;32!UBERON:0001950;1.83e-28;20!UBERON:0003528;3.35e-28;34!UBERON:0002020;3.35e-28;34!UBERON:0000956;2.11e-26;25!UBERON:0000203;2.11e-26;25!UBERON:0002298;1.02e-23;6!UBERON:0001017;1.13e-23;75!UBERON:0001016;6.52e-20;83!UBERON:0000955;3.10e-18;68!UBERON:0004733;1.73e-15;12!UBERON:0002028;1.73e-15;12!UBERON:0004732;3.18e-14;13!UBERON:0002240;4.15e-13;3!UBERON:0005174;4.15e-13;3!UBERON:0001137;4.15e-13;3!UBERON:0001896;6.01e-13;3!UBERON:0005290;6.01e-13;3!UBERON:0002021;1.26e-12;5!UBERON:0000988;1.59e-12;3!UBERON:0000125;3.30e-11;9!UBERON:0002308;3.30e-11;9!UBERON:0007023;4.23e-10;114!UBERON:0001894;1.94e-09;7!UBERON:0001897;3.82e-09;2!UBERON:0010225;3.82e-09;2!UBERON:0002148;5.19e-09;2!UBERON:0006331;5.19e-09;2!UBERON:0009662;5.19e-09;2!UBERON:0011216;2.54e-08;132!UBERON:0000349;3.09e-08;5!UBERON:0002420;1.34e-07;9!UBERON:0007245;1.34e-07;9!UBERON:0010009;1.34e-07;9!UBERON:0010011;1.34e-07;9!UBERON:0000454;1.34e-07;9!UBERON:0001872;1.58e-07;5!UBERON:0002680;3.57e-07;9!UBERON:0001895;3.57e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.04e-68,56;UBERON:0005068,2.04e-68,56;UBERON:0006241,2.04e-68,56;UBERON:0007135,2.04e-68,56;UBERON:0001017,4.66e-65,81;UBERON:0001016,2.79e-61,89;UBERON:0000073,5.13e-59,53;UBERON:0002616,5.13e-59,53;UBERON:0000955,1.64e-50,68;UBERON:0006238,1.64e-50,68;UBERON:0002346,3.39e-45,86;UBERON:0003075,1.50e-44,82;UBERON:0007284,1.50e-44,82;UBERON:0002780,2.35e-44,41;UBERON:0001890,2.35e-44,41;UBERON:0003080,2.35e-44,41;UBERON:0006240,2.35e-44,41;UBERON:0003528,2.92e-36,34;UBERON:0002020,2.92e-36,34;UBERON:0001893,3.39e-36,34;UBERON:0001869,2.33e-34,32;UBERON:0010371,1.38e-33,104;UBERON:0002791,1.34e-30,32;UBERON:0002619,2.57e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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6297 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10526 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y467 | |||
|association_with_transcript=0bp_to_ENST00000327430_5end | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_5_at_SALL2_5end | |||
|id=chr14:22005343..22005364,- | |||
|ontology_enrichment_celltype=CL:0002322!4.57e-14!5;CL:0000047!5.60e-08!8;CL:0000540!3.01e-07!6;CL:0000031!3.01e-07!6;CL:0000404!3.01e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.48e-22;5!CL:0002321;6.88e-10;15!CL:0000540;2.92e-07;6!CL:0000404;2.92e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.18e-22,5;CL:0000047,7.94e-09,8;CL:0000540,2.92e-07,6;CL:0000031,2.92e-07,6;CL:0000404,2.92e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.65e-15;82!UBERON:0006241;4.15e-13;3!UBERON:0003057;4.15e-13;3!CL:0000031;2.92e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@SALL2 | |||
}} |
Revision as of 03:46, 11 September 2013
Short description: | p5@SALL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SALL2_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000327430_5end |
EntrezGene: | SALL2 |
HGNC: | 10526 |
UniProt: | Q9Y467 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.18e-22 | 5 |
neuronal stem cell | 7.94e-09 | 8 |
neuron | 2.92e-07 | 6 |
neuroblast | 2.92e-07 | 6 |
electrically signaling cell | 2.92e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.