FFCP PHASE1:Mm9::chr10:111707090..111707123,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:111707090..111707123,+|id=chr10:111707090..111707123,+|ontology_enrichment_celltype=CL:0000540!1.91e-13!33;CL:0000047!1.91e-13!33;CL:0000031!1.91e-13!33;CL:0000404!1.91e-13!33;CL:0000117!4.25e-12!23;CL:0000337!4.25e-12!23;CL:0000393!1.63e-09!39;CL:0000211!1.63e-09!39;CL:0002319!2.34e-09!43;CL:0000221!7.12e-09!44;CL:0000133!7.12e-09!44|ontology_enrichment_celltype_v019_2=CL:0000117,3.78e-14,23;CL:0000337,3.78e-14,23;CL:0000540,1.67e-10,33;CL:0000047,1.67e-10,33;CL:0000031,1.67e-10,33;CL:0000404,1.67e-10,33;CL:0002610,5.92e-09,3;CL:0000393,2.00e-08,39;CL:0000211,2.00e-08,39;CL:0002614,2.11e-07,3;CL:0002319,2.28e-07,43;CL:0002612,3.71e-07,3;CL:0000221,3.90e-07,44;CL:0000133,3.90e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.15e-24!73;UBERON:0005743!3.15e-24!73;UBERON:0000073!1.70e-23!75;UBERON:0001016!1.70e-23!75;UBERON:0003056!2.27e-21!49;UBERON:0002346!3.31e-21!71;UBERON:0003075!3.31e-21!71;UBERON:0007284!3.31e-21!71;UBERON:0004121!1.05e-20!102;UBERON:0000924!1.05e-20!102;UBERON:0006601!1.05e-20!102;UBERON:0000033!1.06e-20!63;UBERON:0001049!5.84e-19!52;UBERON:0005068!5.84e-19!52;UBERON:0006241!5.84e-19!52;UBERON:0007135!5.84e-19!52;UBERON:0002020!2.31e-18!34;UBERON:0000955!3.91e-18!50;UBERON:0006238!3.91e-18!50;UBERON:0002616!1.90e-17!49;UBERON:0003080!6.08e-17!40;UBERON:0002780!3.14e-16!39;UBERON:0001890!3.14e-16!39;UBERON:0006240!3.14e-16!39;UBERON:0002791!4.60e-15!29;UBERON:0003528!4.60e-15!29;UBERON:0001893!4.60e-15!29;UBERON:0007811!1.28e-10!86;UBERON:0000956!3.82e-10!21;UBERON:0001869!3.82e-10!21;UBERON:0000203!3.82e-10!21;UBERON:0002021!3.05e-09!10;UBERON:0000411!3.05e-09!10;UBERON:0001950!3.05e-09!10;UBERON:0002619!3.57e-09!17;UBERON:0000153!4.08e-08!94;UBERON:0000025!9.89e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.28e-30,54;UBERON:0001017,2.07e-29,73;UBERON:0002020,2.92e-29,34;UBERON:0001016,1.96e-28,75;UBERON:0001049,1.00e-25,52;UBERON:0005068,1.00e-25,52;UBERON:0006241,1.00e-25,52;UBERON:0007135,1.00e-25,52;UBERON:0004121,1.03e-25,95;UBERON:0000924,1.03e-25,95;UBERON:0006601,1.03e-25,95;UBERON:0002346,3.58e-25,64;UBERON:0003075,3.58e-25,64;UBERON:0007284,3.58e-25,64;UBERON:0002021,7.47e-24,10;UBERON:0000411,7.47e-24,10;UBERON:0001950,7.47e-24,10;UBERON:0003528,2.75e-23,29;UBERON:0002791,2.75e-23,29;UBERON:0001893,2.75e-23,29;UBERON:0003056,4.38e-23,49;UBERON:0003080,2.00e-22,40;UBERON:0010371,2.99e-21,73;UBERON:0002780,8.56e-21,39;UBERON:0001890,8.56e-21,39;UBERON:0006240,8.56e-21,39;UBERON:0000955,2.76e-20,47;UBERON:0006238,2.76e-20,47;UBERON:0002619,5.10e-19,17;UBERON:0002616,7.94e-19,46;UBERON:0000956,1.22e-17,21;UBERON:0001869,1.22e-17,21;UBERON:0000203,1.22e-17,21;UBERON:0010314,1.72e-15,92;UBERON:0002950,2.06e-09,4;UBERON:0001891,2.06e-09,4;UBERON:0009616,2.06e-09,4;UBERON:0010286,2.06e-09,4;UBERON:0002240,4.28e-09,6;UBERON:0005174,4.28e-09,6;UBERON:0001137,4.28e-09,6;UBERON:0004684,5.92e-09,3;UBERON:0002275,5.92e-09,3;UBERON:0000025,1.98e-08,114;UBERON:0004111,1.72e-07,122;UBERON:0002038,2.11e-07,3;UBERON:0009663,2.11e-07,3;UBERON:0009661,2.11e-07,3;UBERON:0000125,2.11e-07,3;UBERON:0002308,2.11e-07,3;UBERON:0001948,3.22e-07,5;UBERON:0002315,3.22e-07,5;UBERON:0002257,3.71e-07,3;UBERON:0002420,8.79e-07,8;UBERON:0007245,8.79e-07,8;UBERON:0010009,8.79e-07,8;UBERON:0010011,8.79e-07,8;UBERON:0000454,8.79e-07,8|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,1.26766280701236,0,0.889294796111139,0,0,0,0,0.384218305321555,0.103689612308478,0.540023753326763,0.210324961351382,0.856952953211411,1.76694832761291,0.734944795289724,0.479227355091182,0,8.8092704799511,12.7687338085188,11.6740965274745,0.791317726381163,0.731901148819277,1.04182674111352,2.23346399201105,1.68828783009504,3.81995619442025,1.47314292736834,1.28134512719193,2.42319279572891,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84602214869163,3.66000482254901,0.879580464790051,7.30062144807561,5.37002460393694,11.4283424507758,8.59878694259116,0.407357455401265,0.124406970610093,0.505445516867349,0.420883711772948,0.520481771850815,0.229902104433473,1.26043490863744,0.90422890701429,2.38127747029647,1.15302348256365,0.749613796477831,0.517406741478031,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.938104239924385,0.180062061461015,0.710234206755631,0.590292695242212,0.462801338662135,0,0,0.350296027101508,0.329119699826961,0.164167464079095,0.162137619091711,0.146199987425332,0,0.134206418760372,8.41159794256509,2.16099685996497,0,0,0,0,0,0,0,0.190225626112559,0.474529061544512,0,0,0,0,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,0.610953983535943,1.35766741017338,0.631222379012867,0.189709611372772,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0.491764273019036,0,0.80275294993896,0.937693492737625,0,0.252470927204373,0.631016438832513,0.390438744296638,0.430846795465598,0.477937595905104,0,0,1.21443210502468,0.584511715822624,0.790575555893047,2.24924921495265,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.428674070063185,0.354680467284547,0.178368817602071,0,0.608929898229199,0,0,0,0,0,0,0.119372344003136,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0.388902376688095,0.516639293910924,0.506868376472335,0.117357238645754,0.911430693907651,0.209718688851422,0.241584120826006,0,0.316011120628178,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0.428736758158132,0,4.51801474093653,3.68260189205742,5.72895513439397,4.81188910562325,10.2762377965596,7.55393897389701,7.42524750254986,6.75481804836331,5.89085131679466,8.80192529978094,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.37456602987953,0.256100609619477,0.229741875822453,0.476293691283074,0.579421629724277,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0.726732083161643,0.470546902076653,0.338458431566706,0.548783918618318,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.394017929502254,0.409231043169689,0.309873682371932,0.385813221962283,0.499621155875892,0,0.644613162144895,0.57386499620653,0.220591419119515,0.463735671240843|short_description=p@chr10:111707090..111707123,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:111707090..111707123,+ | |||
|id=chr10:111707090..111707123,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.91e-13!33;CL:0000047!1.91e-13!33;CL:0000031!1.91e-13!33;CL:0000404!1.91e-13!33;CL:0000117!4.25e-12!23;CL:0000337!4.25e-12!23;CL:0000393!1.63e-09!39;CL:0000211!1.63e-09!39;CL:0002319!2.34e-09!43;CL:0000221!7.12e-09!44;CL:0000133!7.12e-09!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.78e-14,23;CL:0000337,3.78e-14,23;CL:0000540,1.67e-10,33;CL:0000047,1.67e-10,33;CL:0000031,1.67e-10,33;CL:0000404,1.67e-10,33;CL:0002610,5.92e-09,3;CL:0000393,2.00e-08,39;CL:0000211,2.00e-08,39;CL:0002614,2.11e-07,3;CL:0002319,2.28e-07,43;CL:0002612,3.71e-07,3;CL:0000221,3.90e-07,44;CL:0000133,3.90e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.15e-24!73;UBERON:0005743!3.15e-24!73;UBERON:0000073!1.70e-23!75;UBERON:0001016!1.70e-23!75;UBERON:0003056!2.27e-21!49;UBERON:0002346!3.31e-21!71;UBERON:0003075!3.31e-21!71;UBERON:0007284!3.31e-21!71;UBERON:0004121!1.05e-20!102;UBERON:0000924!1.05e-20!102;UBERON:0006601!1.05e-20!102;UBERON:0000033!1.06e-20!63;UBERON:0001049!5.84e-19!52;UBERON:0005068!5.84e-19!52;UBERON:0006241!5.84e-19!52;UBERON:0007135!5.84e-19!52;UBERON:0002020!2.31e-18!34;UBERON:0000955!3.91e-18!50;UBERON:0006238!3.91e-18!50;UBERON:0002616!1.90e-17!49;UBERON:0003080!6.08e-17!40;UBERON:0002780!3.14e-16!39;UBERON:0001890!3.14e-16!39;UBERON:0006240!3.14e-16!39;UBERON:0002791!4.60e-15!29;UBERON:0003528!4.60e-15!29;UBERON:0001893!4.60e-15!29;UBERON:0007811!1.28e-10!86;UBERON:0000956!3.82e-10!21;UBERON:0001869!3.82e-10!21;UBERON:0000203!3.82e-10!21;UBERON:0002021!3.05e-09!10;UBERON:0000411!3.05e-09!10;UBERON:0001950!3.05e-09!10;UBERON:0002619!3.57e-09!17;UBERON:0000153!4.08e-08!94;UBERON:0000025!9.89e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.28e-30,54;UBERON:0001017,2.07e-29,73;UBERON:0002020,2.92e-29,34;UBERON:0001016,1.96e-28,75;UBERON:0001049,1.00e-25,52;UBERON:0005068,1.00e-25,52;UBERON:0006241,1.00e-25,52;UBERON:0007135,1.00e-25,52;UBERON:0004121,1.03e-25,95;UBERON:0000924,1.03e-25,95;UBERON:0006601,1.03e-25,95;UBERON:0002346,3.58e-25,64;UBERON:0003075,3.58e-25,64;UBERON:0007284,3.58e-25,64;UBERON:0002021,7.47e-24,10;UBERON:0000411,7.47e-24,10;UBERON:0001950,7.47e-24,10;UBERON:0003528,2.75e-23,29;UBERON:0002791,2.75e-23,29;UBERON:0001893,2.75e-23,29;UBERON:0003056,4.38e-23,49;UBERON:0003080,2.00e-22,40;UBERON:0010371,2.99e-21,73;UBERON:0002780,8.56e-21,39;UBERON:0001890,8.56e-21,39;UBERON:0006240,8.56e-21,39;UBERON:0000955,2.76e-20,47;UBERON:0006238,2.76e-20,47;UBERON:0002619,5.10e-19,17;UBERON:0002616,7.94e-19,46;UBERON:0000956,1.22e-17,21;UBERON:0001869,1.22e-17,21;UBERON:0000203,1.22e-17,21;UBERON:0010314,1.72e-15,92;UBERON:0002950,2.06e-09,4;UBERON:0001891,2.06e-09,4;UBERON:0009616,2.06e-09,4;UBERON:0010286,2.06e-09,4;UBERON:0002240,4.28e-09,6;UBERON:0005174,4.28e-09,6;UBERON:0001137,4.28e-09,6;UBERON:0004684,5.92e-09,3;UBERON:0002275,5.92e-09,3;UBERON:0000025,1.98e-08,114;UBERON:0004111,1.72e-07,122;UBERON:0002038,2.11e-07,3;UBERON:0009663,2.11e-07,3;UBERON:0009661,2.11e-07,3;UBERON:0000125,2.11e-07,3;UBERON:0002308,2.11e-07,3;UBERON:0001948,3.22e-07,5;UBERON:0002315,3.22e-07,5;UBERON:0002257,3.71e-07,3;UBERON:0002420,8.79e-07,8;UBERON:0007245,8.79e-07,8;UBERON:0010009,8.79e-07,8;UBERON:0010011,8.79e-07,8;UBERON:0000454,8.79e-07,8 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,1.26766280701236,0,0.889294796111139,0,0,0,0,0.384218305321555,0.103689612308478,0.540023753326763,0.210324961351382,0.856952953211411,1.76694832761291,0.734944795289724,0.479227355091182,0,8.8092704799511,12.7687338085188,11.6740965274745,0.791317726381163,0.731901148819277,1.04182674111352,2.23346399201105,1.68828783009504,3.81995619442025,1.47314292736834,1.28134512719193,2.42319279572891,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84602214869163,3.66000482254901,0.879580464790051,7.30062144807561,5.37002460393694,11.4283424507758,8.59878694259116,0.407357455401265,0.124406970610093,0.505445516867349,0.420883711772948,0.520481771850815,0.229902104433473,1.26043490863744,0.90422890701429,2.38127747029647,1.15302348256365,0.749613796477831,0.517406741478031,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.938104239924385,0.180062061461015,0.710234206755631,0.590292695242212,0.462801338662135,0,0,0.350296027101508,0.329119699826961,0.164167464079095,0.162137619091711,0.146199987425332,0,0.134206418760372,8.41159794256509,2.16099685996497,0,0,0,0,0,0,0,0.190225626112559,0.474529061544512,0,0,0,0,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,0.610953983535943,1.35766741017338,0.631222379012867,0.189709611372772,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0.491764273019036,0,0.80275294993896,0.937693492737625,0,0.252470927204373,0.631016438832513,0.390438744296638,0.430846795465598,0.477937595905104,0,0,1.21443210502468,0.584511715822624,0.790575555893047,2.24924921495265,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.428674070063185,0.354680467284547,0.178368817602071,0,0.608929898229199,0,0,0,0,0,0,0.119372344003136,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0.388902376688095,0.516639293910924,0.506868376472335,0.117357238645754,0.911430693907651,0.209718688851422,0.241584120826006,0,0.316011120628178,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0.428736758158132,0,4.51801474093653,3.68260189205742,5.72895513439397,4.81188910562325,10.2762377965596,7.55393897389701,7.42524750254986,6.75481804836331,5.89085131679466,8.80192529978094,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.37456602987953,0.256100609619477,0.229741875822453,0.476293691283074,0.579421629724277,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0.726732083161643,0.470546902076653,0.338458431566706,0.548783918618318,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.394017929502254,0.409231043169689,0.309873682371932,0.385813221962283,0.499621155875892,0,0.644613162144895,0.57386499620653,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr10:111707090..111707123,+ | |||
}} |
Revision as of 15:44, 12 September 2013
Short description: | p@chr10:111707090..111707123, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:111707090..111707123, + |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.78e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.78e-14 | 23 |
neuron | 1.67e-10 | 33 |
neuronal stem cell | 1.67e-10 | 33 |
neuroblast | 1.67e-10 | 33 |
electrically signaling cell | 1.67e-10 | 33 |
raphe nuclei neuron | 5.92e-09 | 3 |
electrically responsive cell | 2.00e-08 | 39 |
electrically active cell | 2.00e-08 | 39 |
neuron of the substantia nigra | 2.11e-07 | 3 |
neural cell | 2.28e-07 | 43 |
neuron of the ventral spinal cord | 3.71e-07 | 3 |
ectodermal cell | 3.90e-07 | 44 |
neurectodermal cell | 3.90e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.