FFCP PHASE1:Mm9::chr11:118163704..118163718,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=487|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:118163704..118163718,-|id=chr11:118163704..118163718,-|ontology_enrichment_celltype=CL:0000055!1.67e-09!50;CL:0000393!4.65e-07!39;CL:0000211!4.65e-07!39;CL:0002319!7.33e-07!43|ontology_enrichment_celltype_v019_2=CL:0000680,2.04e-12,6;CL:0000187,2.04e-12,6;CL:0000056,2.04e-12,6;CL:0000222,1.68e-10,7;CL:0000355,1.72e-10,9;CL:0002453,9.84e-09,8;CL:0002194,4.13e-08,4;CL:0000766,4.13e-08,4;CL:0000234,4.13e-08,4;CL:0000576,4.13e-08,4;CL:0000235,4.13e-08,4;CL:0000864,4.13e-08,4;CL:0002009,4.13e-08,4;CL:0000040,4.13e-08,4;CL:0000559,4.13e-08,4;CL:0000192,1.93e-07,3;CL:0000359,1.93e-07,3;CL:0002539,1.93e-07,3;CL:0000514,1.93e-07,3;CL:0002092,4.59e-07,3;CL:0002540,4.59e-07,3;CL:0000723,4.68e-07,91;CL:0000048,4.68e-07,91;CL:0002321,6.38e-07,70;CL:0000333,8.44e-07,10;CL:0000095,8.44e-07,10;CL:0000243,8.44e-07,10;CL:0000123,8.44e-07,10;CL:0000125,8.44e-07,10;CL:0000030,8.44e-07,10;CL:0000339,8.44e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.10e-09!75;UBERON:0001016!1.10e-09!75;UBERON:0001017!1.55e-09!73;UBERON:0005743!1.55e-09!73;UBERON:0002020!1.19e-07!34;UBERON:0004121!5.00e-07!102;UBERON:0000924!5.00e-07!102;UBERON:0006601!5.00e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.72e-10,9;UBERON:0002036,1.72e-10,9;UBERON:0002385,1.72e-10,9;UBERON:0000486,1.72e-10,9;UBERON:0007503,1.72e-10,9;UBERON:0001015,1.72e-10,9;UBERON:0002329,1.72e-10,9;UBERON:0003082,1.72e-10,9;UBERON:0003059,1.72e-10,9;UBERON:0007282,1.72e-10,9;UBERON:0004290,1.72e-10,9;UBERON:0009618,1.72e-10,9;UBERON:0000383,2.62e-09,10;UBERON:0002204,2.82e-09,32;UBERON:0007524,2.43e-08,11;UBERON:0003077,2.43e-08,11;UBERON:0007285,2.43e-08,11;UBERON:0002021,6.27e-08,10;UBERON:0000411,6.27e-08,10;UBERON:0001950,6.27e-08,10;UBERON:0001135,1.93e-07,3;UBERON:0004237,1.93e-07,3;UBERON:0004695,1.93e-07,3;UBERON:0002111,1.93e-07,3;UBERON:0004178,1.93e-07,3;UBERON:0002619,3.22e-07,17|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,1.57057123192139,0.588231488031014,0,0.485510353031154,10.7012295279241,9.22530074097583,6.05704282133549,2.34717403304412,0.65407546914134,2.85592037554813,2.72201858703997,2.37976916763116,0,0,0,0,1.28629718017973,2.86533439938757,6.70373719960675,0.809265843438391,0.528990979272033,0.633831403506179,1.69422266034566,2.66788438833342,3.1496490104849,4.94433181283487,2.8419204597844,2.99600110518405,3.07374644257244,0.311068836925433,0,0.420649922702764,1.42825492201902,0.662605622854841,0,0.0958454710182364,0.919218786610021,0,0.255374676170375,1.22885226604995,0,0.823388792421687,0,0.837548997004143,2.8138130501584,1.68078072554491,1.76777151284201,0.854230084794618,0.186399445825301,0.454357159999104,0.226714680320357,0,0,0,0,0,0,0,1.53387290320252,1.81850203222008,2.12003744706204,0,1.28326477414318,2.54805239706646,0,0.216491041011214,1.26679932737549,0.505524445014783,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0,0.470354828542819,0,0.247194967734374,0.289198713839823,0,0.647067399789637,0,0.969750506270444,0,0,0,0,0,0,0,0.748953197024114,0.457500602818626,0.125654352112864,0.173824320192276,1.27857728665165,0.20778804455956,0.324482526135515,0.81471491080253,0.497627882440372,0,0,0,0.459804208866946,0.180062129805349,0.60281927134286,0.340182495756639,0.640568601424249,0.281105173679186,0.258703370739016,0.215567992932842,0,0,0.876782929710299,0,0,0.61734640922383,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0.462801338662135,0.465067889500816,0,0.116765342367169,0.987359099480883,0,0,0.146199987425332,0.439100230582101,0,0.630869845692382,0.617427674275707,0,0,0,0.464473343720877,0,0,0.444756087689741,0.190225626112559,0,0,0.502670417600539,0,0.19496408711912,0,0,0,0,0.685491075658373,0,0.407302655690628,0.581857461502877,0,0.189709611372772,0.147610147979602,0.31399745568275,0,0,0,0,0,0,0,0.25462585178142,0,0,0,1.43768206527355,0,0,0,0,0,1.29327233116623,0,0.162964976442026,0.339490171550376,0.469380496577004,0,0,0,1.10344600874334,2.21464689648775,0.637819074629948,0.491589944147214,1.03610989119537,1.15719246865209,3.01582567878545,1.08781136763742,0,0.275936746304732,0.80275294993896,0.117211686592203,0.655739781506702,0,0.315508219416257,0.390438744296638,0.430846795465598,0.716906393857656,0.668396022247182,1.13230612315533,0,0.292255857911312,0.395287777946524,1.28528526568723,0.141940085208269,0.35613120733451,0.325773918707152,0.989820737835213,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,0.258428293168221,0.727067458955011,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0,0,0.643011105094777,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0.63549621259146,0,1.15420377059036,0.161464426695906,0.120625849856312,0.238744688006273,0.164140899745061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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=487 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:118163704..118163718,- | |||
|id=chr11:118163704..118163718,- | |||
|ontology_enrichment_celltype=CL:0000055!1.67e-09!50;CL:0000393!4.65e-07!39;CL:0000211!4.65e-07!39;CL:0002319!7.33e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.04e-12,6;CL:0000187,2.04e-12,6;CL:0000056,2.04e-12,6;CL:0000222,1.68e-10,7;CL:0000355,1.72e-10,9;CL:0002453,9.84e-09,8;CL:0002194,4.13e-08,4;CL:0000766,4.13e-08,4;CL:0000234,4.13e-08,4;CL:0000576,4.13e-08,4;CL:0000235,4.13e-08,4;CL:0000864,4.13e-08,4;CL:0002009,4.13e-08,4;CL:0000040,4.13e-08,4;CL:0000559,4.13e-08,4;CL:0000192,1.93e-07,3;CL:0000359,1.93e-07,3;CL:0002539,1.93e-07,3;CL:0000514,1.93e-07,3;CL:0002092,4.59e-07,3;CL:0002540,4.59e-07,3;CL:0000723,4.68e-07,91;CL:0000048,4.68e-07,91;CL:0002321,6.38e-07,70;CL:0000333,8.44e-07,10;CL:0000095,8.44e-07,10;CL:0000243,8.44e-07,10;CL:0000123,8.44e-07,10;CL:0000125,8.44e-07,10;CL:0000030,8.44e-07,10;CL:0000339,8.44e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.10e-09!75;UBERON:0001016!1.10e-09!75;UBERON:0001017!1.55e-09!73;UBERON:0005743!1.55e-09!73;UBERON:0002020!1.19e-07!34;UBERON:0004121!5.00e-07!102;UBERON:0000924!5.00e-07!102;UBERON:0006601!5.00e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.72e-10,9;UBERON:0002036,1.72e-10,9;UBERON:0002385,1.72e-10,9;UBERON:0000486,1.72e-10,9;UBERON:0007503,1.72e-10,9;UBERON:0001015,1.72e-10,9;UBERON:0002329,1.72e-10,9;UBERON:0003082,1.72e-10,9;UBERON:0003059,1.72e-10,9;UBERON:0007282,1.72e-10,9;UBERON:0004290,1.72e-10,9;UBERON:0009618,1.72e-10,9;UBERON:0000383,2.62e-09,10;UBERON:0002204,2.82e-09,32;UBERON:0007524,2.43e-08,11;UBERON:0003077,2.43e-08,11;UBERON:0007285,2.43e-08,11;UBERON:0002021,6.27e-08,10;UBERON:0000411,6.27e-08,10;UBERON:0001950,6.27e-08,10;UBERON:0001135,1.93e-07,3;UBERON:0004237,1.93e-07,3;UBERON:0004695,1.93e-07,3;UBERON:0002111,1.93e-07,3;UBERON:0004178,1.93e-07,3;UBERON:0002619,3.22e-07,17 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,1.57057123192139,0.588231488031014,0,0.485510353031154,10.7012295279241,9.22530074097583,6.05704282133549,2.34717403304412,0.65407546914134,2.85592037554813,2.72201858703997,2.37976916763116,0,0,0,0,1.28629718017973,2.86533439938757,6.70373719960675,0.809265843438391,0.528990979272033,0.633831403506179,1.69422266034566,2.66788438833342,3.1496490104849,4.94433181283487,2.8419204597844,2.99600110518405,3.07374644257244,0.311068836925433,0,0.420649922702764,1.42825492201902,0.662605622854841,0,0.0958454710182364,0.919218786610021,0,0.255374676170375,1.22885226604995,0,0.823388792421687,0,0.837548997004143,2.8138130501584,1.68078072554491,1.76777151284201,0.854230084794618,0.186399445825301,0.454357159999104,0.226714680320357,0,0,0,0,0,0,0,1.53387290320252,1.81850203222008,2.12003744706204,0,1.28326477414318,2.54805239706646,0,0.216491041011214,1.26679932737549,0.505524445014783,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0,0.470354828542819,0,0.247194967734374,0.289198713839823,0,0.647067399789637,0,0.969750506270444,0,0,0,0,0,0,0,0.748953197024114,0.457500602818626,0.125654352112864,0.173824320192276,1.27857728665165,0.20778804455956,0.324482526135515,0.81471491080253,0.497627882440372,0,0,0,0.459804208866946,0.180062129805349,0.60281927134286,0.340182495756639,0.640568601424249,0.281105173679186,0.258703370739016,0.215567992932842,0,0,0.876782929710299,0,0,0.61734640922383,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0.462801338662135,0.465067889500816,0,0.116765342367169,0.987359099480883,0,0,0.146199987425332,0.439100230582101,0,0.630869845692382,0.617427674275707,0,0,0,0.464473343720877,0,0,0.444756087689741,0.190225626112559,0,0,0.502670417600539,0,0.19496408711912,0,0,0,0,0.685491075658373,0,0.407302655690628,0.581857461502877,0,0.189709611372772,0.147610147979602,0.31399745568275,0,0,0,0,0,0,0,0.25462585178142,0,0,0,1.43768206527355,0,0,0,0,0,1.29327233116623,0,0.162964976442026,0.339490171550376,0.469380496577004,0,0,0,1.10344600874334,2.21464689648775,0.637819074629948,0.491589944147214,1.03610989119537,1.15719246865209,3.01582567878545,1.08781136763742,0,0.275936746304732,0.80275294993896,0.117211686592203,0.655739781506702,0,0.315508219416257,0.390438744296638,0.430846795465598,0.716906393857656,0.668396022247182,1.13230612315533,0,0.292255857911312,0.395287777946524,1.28528526568723,0.141940085208269,0.35613120733451,0.325773918707152,0.989820737835213,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,0.258428293168221,0.727067458955011,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0,0,0.643011105094777,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0.63549621259146,0,1.15420377059036,0.161464426695906,0.120625849856312,0.238744688006273,0.164140899745061,0.291480836629851,0.370850604021019,0.170870880797853,0,0,0.941842285023455,0.136694227721025,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0.418176592028937,0.436725127492355,0.269728692769641,0,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.258319646955462,0.337912250981556,0.704143431874524,0.651021924219751,0.314578033277133,0,0.288030006257865,0,0,0.205421914329655,0.389762468933385,0,0,0.120195449519969,0.295379054349154,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0.167884616364078,0.19318959403219,0.750729901804728,1.28206136987086,0.214368379079066,0,5.0827665835536,1.38097570952153,1.14579102687879,0.859265911718438,0.685082519770642,1.5107877947794,1.35004500046361,0.45032120322422,2.26571204492102,1.55328093525546,0,0,0.170733605754134,0.243106717068294,0,0.551530525350042,0.44449345560323,0.412070114477788,0,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.320125762024346,0.402048282689293,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.342869252385415,0.887379030796687,0,0.145346416632329,0.188218760830661,0.338458431566706,0.548783918618318,1.57841826862706,0,0,0.474540072496697,0.492522411877817,0.818462086339379,0.154936841185966,0.192906610981141,0.999242311751784,0,0.644613162144895,0.765153328275374,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr11:118163704..118163718,- | |||
}} |
Revision as of 18:59, 12 September 2013
Short description: | p@chr11:118163704..118163718, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:118163704..118163718, - |
Coexpression cluster: | MCL_coexpression_mm9:487 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.04e-12 | 6 |
muscle cell | 2.04e-12 | 6 |
myoblast | 2.04e-12 | 6 |
mesodermal cell | 1.68e-10 | 7 |
multi-potent skeletal muscle stem cell | 1.72e-10 | 9 |
oligodendrocyte precursor cell | 9.84e-09 | 8 |
monopoietic cell | 4.13e-08 | 4 |
myeloid leukocyte | 4.13e-08 | 4 |
phagocyte | 4.13e-08 | 4 |
monocyte | 4.13e-08 | 4 |
macrophage | 4.13e-08 | 4 |
tissue-resident macrophage | 4.13e-08 | 4 |
macrophage dendritic cell progenitor | 4.13e-08 | 4 |
monoblast | 4.13e-08 | 4 |
promonocyte | 4.13e-08 | 4 |
smooth muscle cell | 1.93e-07 | 3 |
vascular associated smooth muscle cell | 1.93e-07 | 3 |
aortic smooth muscle cell | 1.93e-07 | 3 |
smooth muscle myoblast | 1.93e-07 | 3 |
bone marrow cell | 4.59e-07 | 3 |
mesenchymal stem cell of the bone marrow | 4.59e-07 | 3 |
somatic stem cell | 4.68e-07 | 91 |
multi fate stem cell | 4.68e-07 | 91 |
embryonic cell | 6.38e-07 | 70 |
migratory neural crest cell | 8.44e-07 | 10 |
neuron associated cell | 8.44e-07 | 10 |
glial cell (sensu Vertebrata) | 8.44e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 8.44e-07 | 10 |
glial cell | 8.44e-07 | 10 |
glioblast | 8.44e-07 | 10 |
glioblast (sensu Vertebrata) | 8.44e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.72e-10 | 9 |
striated muscle tissue | 1.72e-10 | 9 |
muscle tissue | 1.72e-10 | 9 |
multilaminar epithelium | 1.72e-10 | 9 |
epithelial vesicle | 1.72e-10 | 9 |
musculature | 1.72e-10 | 9 |
somite | 1.72e-10 | 9 |
myotome | 1.72e-10 | 9 |
presomitic mesoderm | 1.72e-10 | 9 |
presumptive segmental plate | 1.72e-10 | 9 |
dermomyotome | 1.72e-10 | 9 |
trunk paraxial mesoderm | 1.72e-10 | 9 |
musculature of body | 2.62e-09 | 10 |
musculoskeletal system | 2.82e-09 | 32 |
dense mesenchyme tissue | 2.43e-08 | 11 |
paraxial mesoderm | 2.43e-08 | 11 |
presumptive paraxial mesoderm | 2.43e-08 | 11 |
occipital lobe | 6.27e-08 | 10 |
visual cortex | 6.27e-08 | 10 |
neocortex | 6.27e-08 | 10 |
smooth muscle tissue | 1.93e-07 | 3 |
blood vessel smooth muscle | 1.93e-07 | 3 |
arterial system smooth muscle | 1.93e-07 | 3 |
artery smooth muscle tissue | 1.93e-07 | 3 |
aorta smooth muscle tissue | 1.93e-07 | 3 |
regional part of cerebral cortex | 3.22e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.