FFCP PHASE1:Mm9::chr12:17183380..17183393,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=382571|HGNC=|MCL_coexpression_id=2|UniProt=E9PYC0,Q7TSH7|association_with_transcript=300bp_to_ENSMUST00000170580,NM_201531,uc007ncn.2_5end|description=CAGE_peak_2_at_Kcnf1_5end|id=chr12:17183380..17183393,-|ontology_enrichment_celltype=CL:0000117!9.29e-14!23;CL:0000337!9.29e-14!23;CL:0000540!3.21e-08!33;CL:0000047!3.21e-08!33;CL:0000031!3.21e-08!33;CL:0000404!3.21e-08!33;CL:0000221!2.61e-07!44;CL:0000133!2.61e-07!44;CL:0002319!5.31e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.45e-11,23;CL:0000337,2.45e-11,23;CL:0002610,1.80e-07,3;CL:0000540,3.54e-07,33;CL:0000047,3.54e-07,33;CL:0000031,3.54e-07,33;CL:0000404,3.54e-07,33;CL:0002613,4.77e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!4.93e-22!34;UBERON:0001049!5.13e-20!52;UBERON:0005068!5.13e-20!52;UBERON:0006241!5.13e-20!52;UBERON:0007135!5.13e-20!52;UBERON:0000955!1.36e-19!50;UBERON:0006238!1.36e-19!50;UBERON:0002791!5.11e-19!29;UBERON:0003528!5.11e-19!29;UBERON:0001893!5.11e-19!29;UBERON:0002616!9.24e-19!49;UBERON:0001017!9.41e-19!73;UBERON:0005743!9.41e-19!73;UBERON:0000073!1.33e-18!75;UBERON:0001016!1.33e-18!75;UBERON:0000033!2.26e-18!63;UBERON:0003080!4.11e-18!40;UBERON:0002780!1.81e-17!39;UBERON:0001890!1.81e-17!39;UBERON:0006240!1.81e-17!39;UBERON:0003056!3.26e-17!49;UBERON:0002346!1.26e-15!71;UBERON:0003075!1.26e-15!71;UBERON:0007284!1.26e-15!71;UBERON:0004121!1.13e-14!102;UBERON:0000924!1.13e-14!102;UBERON:0006601!1.13e-14!102;UBERON:0000956!1.15e-13!21;UBERON:0001869!1.15e-13!21;UBERON:0000203!1.15e-13!21;UBERON:0002619!2.67e-12!17;UBERON:0007811!1.26e-11!86;UBERON:0000153!5.71e-10!94;UBERON:0002021!1.49e-09!10;UBERON:0000411!1.49e-09!10;UBERON:0001950!1.49e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.14e-30,34;UBERON:0003528,8.06e-30,29;UBERON:0002791,8.06e-30,29;UBERON:0001893,8.06e-30,29;UBERON:0000073,4.51e-29,54;UBERON:0003080,2.16e-27,40;UBERON:0002780,8.66e-26,39;UBERON:0001890,8.66e-26,39;UBERON:0006240,8.66e-26,39;UBERON:0002021,3.43e-25,10;UBERON:0000411,3.43e-25,10;UBERON:0001950,3.43e-25,10;UBERON:0000955,5.94e-25,47;UBERON:0006238,5.94e-25,47;UBERON:0001049,1.28e-23,52;UBERON:0005068,1.28e-23,52;UBERON:0006241,1.28e-23,52;UBERON:0007135,1.28e-23,52;UBERON:0001017,1.72e-23,73;UBERON:0002616,4.37e-23,46;UBERON:0001016,1.11e-22,75;UBERON:0003056,2.49e-21,49;UBERON:0002619,7.82e-20,17;UBERON:0000956,2.56e-18,21;UBERON:0001869,2.56e-18,21;UBERON:0000203,2.56e-18,21;UBERON:0002346,4.52e-18,64;UBERON:0003075,4.52e-18,64;UBERON:0007284,4.52e-18,64;UBERON:0004121,8.42e-18,95;UBERON:0000924,8.42e-18,95;UBERON:0006601,8.42e-18,95;UBERON:0010371,4.12e-15,73;UBERON:0002420,6.14e-13,8;UBERON:0007245,6.14e-13,8;UBERON:0010009,6.14e-13,8;UBERON:0010011,6.14e-13,8;UBERON:0000454,6.14e-13,8;UBERON:0000369,3.07e-11,5;UBERON:0002435,3.07e-11,5;UBERON:0000204,3.07e-11,5;UBERON:0010082,3.07e-11,5;UBERON:0010314,8.91e-11,92;UBERON:0000025,1.37e-07,114;UBERON:0004111,1.64e-07,122;UBERON:0004684,1.80e-07,3;UBERON:0002275,1.80e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,4.00282302668886,0,0.234064526321993,0,0.638177271962691,0.171200729931206,0.524522414513984,0,0,0,0,0,0,0.680346321208558,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0.219686182734472,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,2.11596391708813,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.540023753326763,0.841299845405528,0.856952953211411,1.76694832761291,0.857435594504678,0.670918297127655,2.75765635983006,5.50579404996943,2.42605942361857,2.15049146558741,1.31886287730194,2.01272815925301,2.6045668527838,0.837548997004143,1.68828783009504,2.44477196442896,1.47314292736834,0.996601765593721,0.745597783301202,0.454357159999104,0,0,0,0,0,0,0,0.280888840263504,1.02258193546835,0.779358013808606,2.12003744706204,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0,0,0,0,0.117588707135705,0.125666591329675,1.48316980640624,0,0,0.970601099684455,0,0,5.59175283654366,0.292780797011547,0,0,0,0,0,1.49790639404823,6.8625090422794,3.14135880282161,7.99591872884472,8.43861009190091,2.90903262383384,5.51620294430376,0,0,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.272145996605311,0.2562274405697,0.187403449119458,0.258703370739016,0,0.378212160335639,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,3.15434922846191,0.308713837137853,0,0.528901133327089,0,0,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.442655759869801,0.295220295959204,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0.289298117163023,0,0,0,0,0.321101179975584,0.586058432961016,0,0,0,0,0,0,0,0,0.404810701674894,0,0,18.315315036043,0.283880170416537,0.35613120733451,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.720244376125241,0.129358683782755,0.428674070063185,0,0,0.329098041204242,0,0,0,0,0,0.161464426695906,0,0,0,0.874442509889552,0.370850604021019,0.170870880797853,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0.743881101528023,1.04702376793612,0.90730481304255,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0,2.51146472241848,0.563047426353546,0.36630324853453,0.214368379079066,0,11.2950368523413,15.651058041244,9.73922372846974,17.7008777813998,9.59115527678899,12.0863023582352,8.77529250301348,13.5096360967266,12.2348450425735,15.0150490408028,0.103787347584177,0,0.170733605754134,0,0,0,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.448176066834085,0.229741875822453,0,0.463537303779422,0,0.412085900803307,0,0.342869252385415,0.177475806159338,0,0.290692833264657,0.376437521661322,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.464810523557898,0.385813221962283,0.249810577937946,0.233931608445408,1.28922632428979,0.57386499620653,0,0.231867835620421|short_description=p2@Kcnf1}} | ||
|EntrezGene=382571 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=E9PYC0,Q7TSH7 | |||
|association_with_transcript=300bp_to_ENSMUST00000170580,NM_201531,uc007ncn.2_5end | |||
|description=CAGE_peak_2_at_Kcnf1_5end | |||
|id=chr12:17183380..17183393,- | |||
|ontology_enrichment_celltype=CL:0000117!9.29e-14!23;CL:0000337!9.29e-14!23;CL:0000540!3.21e-08!33;CL:0000047!3.21e-08!33;CL:0000031!3.21e-08!33;CL:0000404!3.21e-08!33;CL:0000221!2.61e-07!44;CL:0000133!2.61e-07!44;CL:0002319!5.31e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.45e-11,23;CL:0000337,2.45e-11,23;CL:0002610,1.80e-07,3;CL:0000540,3.54e-07,33;CL:0000047,3.54e-07,33;CL:0000031,3.54e-07,33;CL:0000404,3.54e-07,33;CL:0002613,4.77e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.93e-22!34;UBERON:0001049!5.13e-20!52;UBERON:0005068!5.13e-20!52;UBERON:0006241!5.13e-20!52;UBERON:0007135!5.13e-20!52;UBERON:0000955!1.36e-19!50;UBERON:0006238!1.36e-19!50;UBERON:0002791!5.11e-19!29;UBERON:0003528!5.11e-19!29;UBERON:0001893!5.11e-19!29;UBERON:0002616!9.24e-19!49;UBERON:0001017!9.41e-19!73;UBERON:0005743!9.41e-19!73;UBERON:0000073!1.33e-18!75;UBERON:0001016!1.33e-18!75;UBERON:0000033!2.26e-18!63;UBERON:0003080!4.11e-18!40;UBERON:0002780!1.81e-17!39;UBERON:0001890!1.81e-17!39;UBERON:0006240!1.81e-17!39;UBERON:0003056!3.26e-17!49;UBERON:0002346!1.26e-15!71;UBERON:0003075!1.26e-15!71;UBERON:0007284!1.26e-15!71;UBERON:0004121!1.13e-14!102;UBERON:0000924!1.13e-14!102;UBERON:0006601!1.13e-14!102;UBERON:0000956!1.15e-13!21;UBERON:0001869!1.15e-13!21;UBERON:0000203!1.15e-13!21;UBERON:0002619!2.67e-12!17;UBERON:0007811!1.26e-11!86;UBERON:0000153!5.71e-10!94;UBERON:0002021!1.49e-09!10;UBERON:0000411!1.49e-09!10;UBERON:0001950!1.49e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.14e-30,34;UBERON:0003528,8.06e-30,29;UBERON:0002791,8.06e-30,29;UBERON:0001893,8.06e-30,29;UBERON:0000073,4.51e-29,54;UBERON:0003080,2.16e-27,40;UBERON:0002780,8.66e-26,39;UBERON:0001890,8.66e-26,39;UBERON:0006240,8.66e-26,39;UBERON:0002021,3.43e-25,10;UBERON:0000411,3.43e-25,10;UBERON:0001950,3.43e-25,10;UBERON:0000955,5.94e-25,47;UBERON:0006238,5.94e-25,47;UBERON:0001049,1.28e-23,52;UBERON:0005068,1.28e-23,52;UBERON:0006241,1.28e-23,52;UBERON:0007135,1.28e-23,52;UBERON:0001017,1.72e-23,73;UBERON:0002616,4.37e-23,46;UBERON:0001016,1.11e-22,75;UBERON:0003056,2.49e-21,49;UBERON:0002619,7.82e-20,17;UBERON:0000956,2.56e-18,21;UBERON:0001869,2.56e-18,21;UBERON:0000203,2.56e-18,21;UBERON:0002346,4.52e-18,64;UBERON:0003075,4.52e-18,64;UBERON:0007284,4.52e-18,64;UBERON:0004121,8.42e-18,95;UBERON:0000924,8.42e-18,95;UBERON:0006601,8.42e-18,95;UBERON:0010371,4.12e-15,73;UBERON:0002420,6.14e-13,8;UBERON:0007245,6.14e-13,8;UBERON:0010009,6.14e-13,8;UBERON:0010011,6.14e-13,8;UBERON:0000454,6.14e-13,8;UBERON:0000369,3.07e-11,5;UBERON:0002435,3.07e-11,5;UBERON:0000204,3.07e-11,5;UBERON:0010082,3.07e-11,5;UBERON:0010314,8.91e-11,92;UBERON:0000025,1.37e-07,114;UBERON:0004111,1.64e-07,122;UBERON:0004684,1.80e-07,3;UBERON:0002275,1.80e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,4.00282302668886,0,0.234064526321993,0,0.638177271962691,0.171200729931206,0.524522414513984,0,0,0,0,0,0,0.680346321208558,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0.219686182734472,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,2.11596391708813,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.540023753326763,0.841299845405528,0.856952953211411,1.76694832761291,0.857435594504678,0.670918297127655,2.75765635983006,5.50579404996943,2.42605942361857,2.15049146558741,1.31886287730194,2.01272815925301,2.6045668527838,0.837548997004143,1.68828783009504,2.44477196442896,1.47314292736834,0.996601765593721,0.745597783301202,0.454357159999104,0,0,0,0,0,0,0,0.280888840263504,1.02258193546835,0.779358013808606,2.12003744706204,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0,0,0,0,0.117588707135705,0.125666591329675,1.48316980640624,0,0,0.970601099684455,0,0,5.59175283654366,0.292780797011547,0,0,0,0,0,1.49790639404823,6.8625090422794,3.14135880282161,7.99591872884472,8.43861009190091,2.90903262383384,5.51620294430376,0,0,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.272145996605311,0.2562274405697,0.187403449119458,0.258703370739016,0,0.378212160335639,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,3.15434922846191,0.308713837137853,0,0.528901133327089,0,0,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.442655759869801,0.295220295959204,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0.289298117163023,0,0,0,0,0.321101179975584,0.586058432961016,0,0,0,0,0,0,0,0,0.404810701674894,0,0,18.315315036043,0.283880170416537,0.35613120733451,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.720244376125241,0.129358683782755,0.428674070063185,0,0,0.329098041204242,0,0,0,0,0,0.161464426695906,0,0,0,0.874442509889552,0.370850604021019,0.170870880797853,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0.743881101528023,1.04702376793612,0.90730481304255,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0,2.51146472241848,0.563047426353546,0.36630324853453,0.214368379079066,0,11.2950368523413,15.651058041244,9.73922372846974,17.7008777813998,9.59115527678899,12.0863023582352,8.77529250301348,13.5096360967266,12.2348450425735,15.0150490408028,0.103787347584177,0,0.170733605754134,0,0,0,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.448176066834085,0.229741875822453,0,0.463537303779422,0,0.412085900803307,0,0.342869252385415,0.177475806159338,0,0.290692833264657,0.376437521661322,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.464810523557898,0.385813221962283,0.249810577937946,0.233931608445408,1.28922632428979,0.57386499620653,0,0.231867835620421 | |||
|short_description=p2@Kcnf1 | |||
}} |
Revision as of 22:35, 12 September 2013
Short description: | p2@Kcnf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kcnf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 300bp_to_ENSMUST00000170580, NM_201531, uc007ncn.2_5end |
EntrezGene: | Kcnf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.45e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.45e-11 | 23 |
raphe nuclei neuron | 1.80e-07 | 3 |
neuron | 3.54e-07 | 33 |
neuronal stem cell | 3.54e-07 | 33 |
neuroblast | 3.54e-07 | 33 |
electrically signaling cell | 3.54e-07 | 33 |
striatum neuron | 4.77e-07 | 3 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.