FFCP PHASE1:Mm9::chr14:124026167..124026210,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=338370|HGNC=|MCL_coexpression_id=1|UniProt=E9QLE4,E9QQ85,Q8BXR5|association_with_transcript=155bp_to_ENSMUST00000000201,ENSMUST00000072254,NM_177393,uc007vbq.1,uc007vbr.1,uc007vbs.1,uc007vbt.1,uc011zqp.1_5end|description=CAGE_peak_2_at_Nalcn_5end|id=chr14:124026167..124026210,-|ontology_enrichment_celltype=CL:0000540!5.47e-15!33;CL:0000047!5.47e-15!33;CL:0000031!5.47e-15!33;CL:0000404!5.47e-15!33;CL:0000221!2.44e-13!44;CL:0000133!2.44e-13!44;CL:0002319!5.32e-13!43;CL:0000393!1.06e-10!39;CL:0000211!1.06e-10!39;CL:0000117!6.35e-10!23;CL:0000337!6.35e-10!23;CL:0000055!3.57e-09!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.98e-18,33;CL:0000047,1.98e-18,33;CL:0000031,1.98e-18,33;CL:0000404,1.98e-18,33;CL:0000221,4.30e-14,44;CL:0000133,4.30e-14,44;CL:0000393,5.18e-14,39;CL:0000211,5.18e-14,39;CL:0002319,1.25e-13,43;CL:0000117,2.69e-11,23;CL:0000337,2.69e-11,23;CL:0000107,1.10e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.98e-33!73;UBERON:0005743!2.98e-33!73;UBERON:0000073!1.05e-32!75;UBERON:0001016!1.05e-32!75;UBERON:0004121!7.12e-32!102;UBERON:0000924!7.12e-32!102;UBERON:0006601!7.12e-32!102;UBERON:0002346!2.02e-29!71;UBERON:0003075!2.02e-29!71;UBERON:0007284!2.02e-29!71;UBERON:0000033!4.57e-24!63;UBERON:0001049!6.67e-24!52;UBERON:0005068!6.67e-24!52;UBERON:0006241!6.67e-24!52;UBERON:0007135!6.67e-24!52;UBERON:0000955!3.31e-23!50;UBERON:0006238!3.31e-23!50;UBERON:0002616!2.15e-22!49;UBERON:0003056!1.49e-19!49;UBERON:0003080!5.24e-18!40;UBERON:0002780!3.06e-17!39;UBERON:0001890!3.06e-17!39;UBERON:0006240!3.06e-17!39;UBERON:0002020!2.27e-16!34;UBERON:0002791!1.68e-13!29;UBERON:0003528!1.68e-13!29;UBERON:0001893!1.68e-13!29;UBERON:0007811!5.53e-11!86;UBERON:0002619!2.53e-09!17;UBERON:0000153!3.12e-09!94;UBERON:0000956!5.17e-09!21;UBERON:0001869!5.17e-09!21;UBERON:0000203!5.17e-09!21;UBERON:0002021!1.02e-07!10;UBERON:0000411!1.02e-07!10;UBERON:0001950!1.02e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.81e-39,73;UBERON:0001016,8.00e-38,75;UBERON:0004121,3.56e-31,95;UBERON:0000924,3.56e-31,95;UBERON:0006601,3.56e-31,95;UBERON:0000073,2.49e-30,54;UBERON:0002346,3.69e-29,64;UBERON:0003075,3.69e-29,64;UBERON:0007284,3.69e-29,64;UBERON:0001049,4.42e-28,52;UBERON:0005068,4.42e-28,52;UBERON:0006241,4.42e-28,52;UBERON:0007135,4.42e-28,52;UBERON:0010371,7.99e-26,73;UBERON:0000955,5.71e-24,47;UBERON:0006238,5.71e-24,47;UBERON:0002616,6.81e-23,46;UBERON:0010314,3.50e-20,92;UBERON:0002020,1.31e-19,34;UBERON:0003080,1.97e-19,40;UBERON:0002780,2.08e-18,39;UBERON:0001890,2.08e-18,39;UBERON:0006240,2.08e-18,39;UBERON:0003056,2.68e-18,49;UBERON:0003528,1.37e-15,29;UBERON:0002791,1.37e-15,29;UBERON:0001893,1.37e-15,29;UBERON:0002619,6.21e-11,17;UBERON:0002021,1.74e-10,10;UBERON:0000411,1.74e-10,10;UBERON:0001950,1.74e-10,10;UBERON:0000956,2.04e-09,21;UBERON:0001869,2.04e-09,21;UBERON:0000203,2.04e-09,21;UBERON:0003076,3.38e-09,12;UBERON:0003057,3.38e-09,12;UBERON:0002420,7.25e-08,8;UBERON:0007245,7.25e-08,8;UBERON:0010009,7.25e-08,8;UBERON:0010011,7.25e-08,8;UBERON:0000454,7.25e-08,8;UBERON:0002410,1.10e-07,9|phase1_expression=7.52699581392532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.439372365468944,1.94429899074283,0.419959264876088,0,0,0,0,0,0.286533439938757,0,2.63011399117477,5.28990979272033,1.26766280701236,0.338844532069132,0,0,0,0,0.599200221036809,0.384218305321555,0.207379224616955,0.270011876663381,0.210324961351382,6.28432165688368,6.62605622854841,2.20483438586917,1.0543001812006,0.919218786610021,15.4162233399144,13.0241084846891,12.4421291937557,5.40733779693795,4.84884511092771,5.2091337055676,9.49222196604695,11.8180148106653,11.0014738399303,11.490514833473,9.25415925194169,6.15118171223492,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0.561777680527007,0,0,0,1.83096445709685,0,0,0,0,0,0,0.22836775943812,0,1.63286352971307,1.90833859442749,1.82679286987285,0.922461989024234,1.65794904607885,0.940709657085638,0.753999547978053,0,1.15679485535929,0,0.161766849947409,0.441683036920787,0.484875253135222,1.86391761218122,21.0802173848314,17.1746299587033,0,0,0,0,17.9748767285787,15.0975198930147,7.16229807043327,14.0797699355744,10.4843337505436,17.8697718321222,12.0058534670141,1.93494791315601,0.870848794270651,0.252722758433675,0.210441855886474,0.390361328888111,0.919608417733892,0.900310649026746,0.60281927134286,2.72145996605311,2.3060469651273,1.68663104207512,6.46758426847539,0,0,0.351902248327898,0,1.39023624612799,0,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0.32833492815819,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,11.9865270681553,5.55684906848136,0,0,0.426576501070468,0.696710015581316,1.03093969057675,0.605050573870028,0.889512175379481,0.570676878337677,0,0,0,0.397912944082302,0.19496408711912,0.898819408654221,0.2161380498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| ||
|EntrezGene=338370 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=E9QLE4,E9QQ85,Q8BXR5 | |||
|association_with_transcript=155bp_to_ENSMUST00000000201,ENSMUST00000072254,NM_177393,uc007vbq.1,uc007vbr.1,uc007vbs.1,uc007vbt.1,uc011zqp.1_5end | |||
|description=CAGE_peak_2_at_Nalcn_5end | |||
|id=chr14:124026167..124026210,- | |||
|ontology_enrichment_celltype=CL:0000540!5.47e-15!33;CL:0000047!5.47e-15!33;CL:0000031!5.47e-15!33;CL:0000404!5.47e-15!33;CL:0000221!2.44e-13!44;CL:0000133!2.44e-13!44;CL:0002319!5.32e-13!43;CL:0000393!1.06e-10!39;CL:0000211!1.06e-10!39;CL:0000117!6.35e-10!23;CL:0000337!6.35e-10!23;CL:0000055!3.57e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.98e-18,33;CL:0000047,1.98e-18,33;CL:0000031,1.98e-18,33;CL:0000404,1.98e-18,33;CL:0000221,4.30e-14,44;CL:0000133,4.30e-14,44;CL:0000393,5.18e-14,39;CL:0000211,5.18e-14,39;CL:0002319,1.25e-13,43;CL:0000117,2.69e-11,23;CL:0000337,2.69e-11,23;CL:0000107,1.10e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.98e-33!73;UBERON:0005743!2.98e-33!73;UBERON:0000073!1.05e-32!75;UBERON:0001016!1.05e-32!75;UBERON:0004121!7.12e-32!102;UBERON:0000924!7.12e-32!102;UBERON:0006601!7.12e-32!102;UBERON:0002346!2.02e-29!71;UBERON:0003075!2.02e-29!71;UBERON:0007284!2.02e-29!71;UBERON:0000033!4.57e-24!63;UBERON:0001049!6.67e-24!52;UBERON:0005068!6.67e-24!52;UBERON:0006241!6.67e-24!52;UBERON:0007135!6.67e-24!52;UBERON:0000955!3.31e-23!50;UBERON:0006238!3.31e-23!50;UBERON:0002616!2.15e-22!49;UBERON:0003056!1.49e-19!49;UBERON:0003080!5.24e-18!40;UBERON:0002780!3.06e-17!39;UBERON:0001890!3.06e-17!39;UBERON:0006240!3.06e-17!39;UBERON:0002020!2.27e-16!34;UBERON:0002791!1.68e-13!29;UBERON:0003528!1.68e-13!29;UBERON:0001893!1.68e-13!29;UBERON:0007811!5.53e-11!86;UBERON:0002619!2.53e-09!17;UBERON:0000153!3.12e-09!94;UBERON:0000956!5.17e-09!21;UBERON:0001869!5.17e-09!21;UBERON:0000203!5.17e-09!21;UBERON:0002021!1.02e-07!10;UBERON:0000411!1.02e-07!10;UBERON:0001950!1.02e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.81e-39,73;UBERON:0001016,8.00e-38,75;UBERON:0004121,3.56e-31,95;UBERON:0000924,3.56e-31,95;UBERON:0006601,3.56e-31,95;UBERON:0000073,2.49e-30,54;UBERON:0002346,3.69e-29,64;UBERON:0003075,3.69e-29,64;UBERON:0007284,3.69e-29,64;UBERON:0001049,4.42e-28,52;UBERON:0005068,4.42e-28,52;UBERON:0006241,4.42e-28,52;UBERON:0007135,4.42e-28,52;UBERON:0010371,7.99e-26,73;UBERON:0000955,5.71e-24,47;UBERON:0006238,5.71e-24,47;UBERON:0002616,6.81e-23,46;UBERON:0010314,3.50e-20,92;UBERON:0002020,1.31e-19,34;UBERON:0003080,1.97e-19,40;UBERON:0002780,2.08e-18,39;UBERON:0001890,2.08e-18,39;UBERON:0006240,2.08e-18,39;UBERON:0003056,2.68e-18,49;UBERON:0003528,1.37e-15,29;UBERON:0002791,1.37e-15,29;UBERON:0001893,1.37e-15,29;UBERON:0002619,6.21e-11,17;UBERON:0002021,1.74e-10,10;UBERON:0000411,1.74e-10,10;UBERON:0001950,1.74e-10,10;UBERON:0000956,2.04e-09,21;UBERON:0001869,2.04e-09,21;UBERON:0000203,2.04e-09,21;UBERON:0003076,3.38e-09,12;UBERON:0003057,3.38e-09,12;UBERON:0002420,7.25e-08,8;UBERON:0007245,7.25e-08,8;UBERON:0010009,7.25e-08,8;UBERON:0010011,7.25e-08,8;UBERON:0000454,7.25e-08,8;UBERON:0002410,1.10e-07,9 | |||
|phase1_expression=7.52699581392532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.439372365468944,1.94429899074283,0.419959264876088,0,0,0,0,0,0.286533439938757,0,2.63011399117477,5.28990979272033,1.26766280701236,0.338844532069132,0,0,0,0,0.599200221036809,0.384218305321555,0.207379224616955,0.270011876663381,0.210324961351382,6.28432165688368,6.62605622854841,2.20483438586917,1.0543001812006,0.919218786610021,15.4162233399144,13.0241084846891,12.4421291937557,5.40733779693795,4.84884511092771,5.2091337055676,9.49222196604695,11.8180148106653,11.0014738399303,11.490514833473,9.25415925194169,6.15118171223492,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0.561777680527007,0,0,0,1.83096445709685,0,0,0,0,0,0,0.22836775943812,0,1.63286352971307,1.90833859442749,1.82679286987285,0.922461989024234,1.65794904607885,0.940709657085638,0.753999547978053,0,1.15679485535929,0,0.161766849947409,0.441683036920787,0.484875253135222,1.86391761218122,21.0802173848314,17.1746299587033,0,0,0,0,17.9748767285787,15.0975198930147,7.16229807043327,14.0797699355744,10.4843337505436,17.8697718321222,12.0058534670141,1.93494791315601,0.870848794270651,0.252722758433675,0.210441855886474,0.390361328888111,0.919608417733892,0.900310649026746,0.60281927134286,2.72145996605311,2.3060469651273,1.68663104207512,6.46758426847539,0,0,0.351902248327898,0,1.39023624612799,0,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0.32833492815819,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,11.9865270681553,5.55684906848136,0,0,0.426576501070468,0.696710015581316,1.03093969057675,0.605050573870028,0.889512175379481,0.570676878337677,0,0,0,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0,0.189667900953082,0.456994050438915,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,12.0412942490844,11.3695335994437,0,0,5.99465616890888,3.12350995437311,8.18608911384636,4.06246956519338,8.02075226696619,6.79383673893198,2.83367491172426,5.55286130031493,5.53402889125133,18.315315036043,0.851640511249612,0,0.651547837414304,0.494910368917606,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0.516856586336442,0,0,0.948110273807448,0,0,9.87274856685985,0.540183282093931,0.776152102696527,2.35770738534752,2.48276327099183,4.28085162244969,2.63278432963394,0.608929898229199,0,0,0.441056796109924,0.16488625294148,0.322928853391811,0.180938774784468,0,0,0.291480836629851,10.5692422145991,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,0.756037385752609,0.418176592028937,0.436725127492355,0.674321731924103,0.661227645802687,0.523511883968059,0.129614973291793,0,0.56369293868419,0.448549638131936,0,0,0.129159823477731,0.506868376472335,0.469428954583016,1.5624526181274,0.943734099831398,0.483168241652012,0.288030006257865,0,0.608175645870493,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0.214368379079066,0.501572104035363,12.9892923801925,17.4923589872727,13.1765968091061,8.248952752497,8.90607275701835,9.82012066606611,12.1504050041725,10.8077088773813,10.8754178156209,6.73088405277366,0.103787347584177,2.39414924040619,1.19513524027894,0.486213434136588,0.838452650511929,1.10306105070008,2.00022055021454,2.06035057238894,2.24643446714271,2.02157769411038,1.52087579934144,1.88626341386076,1.31098110457835,1.15245274328765,1.20614484806788,2.85776214769844,1.27472758539341,0.964546102318525,0.412085900803307,1.32479028120958,3.42869252385415,1.24233064311536,1.43061713968393,1.74415699958794,1.59985946706062,1.69229215783353,1.28049581010941,1.05227884575137,1.22223702461276,1.68342681497322,2.01679530811096,0.788035859004508,0.818462086339379,1.08455788830176,2.3148793317737,1.74867404556562,0.701794825336225,1.07435527024149,1.14772999241306,0.661774257358546,0.463735671240843 | |||
|short_description=p2@Nalcn | |||
}} |
Revision as of 01:38, 13 September 2013
Short description: | p2@Nalcn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nalcn_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 155bp_to_ENSMUST00000000201, ENSMUST00000072254, NM_177393, uc007vbq.1, uc007vbr.1, uc007vbs.1, uc007vbt.1, uc011zqp.1_5end |
EntrezGene: | Nalcn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.98e-18 | 33 |
neuronal stem cell | 1.98e-18 | 33 |
neuroblast | 1.98e-18 | 33 |
electrically signaling cell | 1.98e-18 | 33 |
ectodermal cell | 4.30e-14 | 44 |
neurectodermal cell | 4.30e-14 | 44 |
electrically responsive cell | 5.18e-14 | 39 |
electrically active cell | 5.18e-14 | 39 |
neural cell | 1.25e-13 | 43 |
CNS neuron (sensu Vertebrata) | 2.69e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.69e-11 | 23 |
autonomic neuron | 1.10e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.