FFCP PHASE1:Mm9::chr19:22522564..22522578,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=226025|HGNC=|MCL_coexpression_id=39|UniProt=B2RUS0|association_with_transcript=-119bp_to_NM_177341,uc008gzo.1_5end|description=CAGE_peak_7_at_Trpm3_5end|id=chr19:22522564..22522578,+|ontology_enrichment_celltype=CL:0000117!8.39e-10!23;CL:0000337!8.39e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.87e-09,23;CL:0000337,1.87e-09,23;CL:0002612,1.11e-07,3;CL:0002610,1.77e-07,3;CL:0000540,4.08e-07,33;CL:0000047,4.08e-07,33;CL:0000031,4.08e-07,33;CL:0000404,4.08e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.93e-24!63;UBERON:0002346!7.59e-22!71;UBERON:0003075!7.59e-22!71;UBERON:0007284!7.59e-22!71;UBERON:0001049!2.36e-20!52;UBERON:0005068!2.36e-20!52;UBERON:0006241!2.36e-20!52;UBERON:0007135!2.36e-20!52;UBERON:0004121!1.53e-19!102;UBERON:0000924!1.53e-19!102;UBERON:0006601!1.53e-19!102;UBERON:0000955!7.46e-19!50;UBERON:0006238!7.46e-19!50;UBERON:0002616!5.56e-18!49;UBERON:0001017!9.28e-18!73;UBERON:0005743!9.28e-18!73;UBERON:0003056!1.07e-17!49;UBERON:0000073!9.03e-17!75;UBERON:0001016!9.03e-17!75;UBERON:0002020!2.89e-16!34;UBERON:0007811!3.96e-14!86;UBERON:0000153!5.16e-14!94;UBERON:0003080!9.46e-14!40;UBERON:0002780!6.19e-13!39;UBERON:0001890!6.19e-13!39;UBERON:0006240!6.19e-13!39;UBERON:0002791!1.87e-12!29;UBERON:0003528!1.87e-12!29;UBERON:0001893!1.87e-12!29;UBERON:0002021!6.35e-09!10;UBERON:0000411!6.35e-09!10;UBERON:0001950!6.35e-09!10;UBERON:0000956!3.43e-08!21;UBERON:0001869!3.43e-08!21;UBERON:0000203!3.43e-08!21;UBERON:0003076!1.49e-07!12;UBERON:0003057!1.49e-07!12;UBERON:0002619!6.59e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.70e-30,54;UBERON:0001017,1.03e-27,73;UBERON:0001016,8.95e-27,75;UBERON:0001049,1.06e-26,52;UBERON:0005068,1.06e-26,52;UBERON:0006241,1.06e-26,52;UBERON:0007135,1.06e-26,52;UBERON:0002346,6.75e-26,64;UBERON:0003075,6.75e-26,64;UBERON:0007284,6.75e-26,64;UBERON:0004121,1.10e-25,95;UBERON:0000924,1.10e-25,95;UBERON:0006601,1.10e-25,95;UBERON:0010371,2.82e-25,73;UBERON:0000955,6.51e-21,47;UBERON:0006238,6.51e-21,47;UBERON:0002020,1.13e-19,34;UBERON:0002616,2.87e-19,46;UBERON:0010314,1.54e-18,92;UBERON:0003056,3.18e-15,49;UBERON:0003076,4.22e-15,12;UBERON:0003057,4.22e-15,12;UBERON:0003080,3.39e-14,40;UBERON:0003528,5.06e-14,29;UBERON:0002791,5.06e-14,29;UBERON:0001893,5.06e-14,29;UBERON:0002021,9.26e-14,10;UBERON:0000411,9.26e-14,10;UBERON:0001950,9.26e-14,10;UBERON:0002780,9.72e-13,39;UBERON:0001890,9.72e-13,39;UBERON:0006240,9.72e-13,39;UBERON:0002619,8.75e-12,17;UBERON:0000956,4.62e-11,21;UBERON:0001869,4.62e-11,21;UBERON:0000203,4.62e-11,21;UBERON:0004111,3.18e-10,122;UBERON:0002240,7.61e-10,6;UBERON:0005174,7.61e-10,6;UBERON:0001137,7.61e-10,6;UBERON:0000025,1.54e-09,114;UBERON:0001948,9.30e-08,5;UBERON:0002315,9.30e-08,5;UBERON:0002257,1.11e-07,3;UBERON:0004684,1.77e-07,3;UBERON:0002275,1.77e-07,3;UBERON:0000483,4.94e-07,174;UBERON:0011216,5.12e-07,194;UBERON:0004733,6.37e-07,6;UBERON:0004732,6.37e-07,6;UBERON:0002028,6.37e-07,6;UBERON:0007277,6.37e-07,6;UBERON:0000119,7.21e-07,176|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0.103689612308478,0.405017814995072,0.210324961351382,0.856952953211411,2.65042249141936,0,0.191690942036473,0,2.20231761998777,2.042997409363,3.22573719838111,0.527545150920775,0.823388792421687,1.04182674111352,0.279182999001381,1.68828783009504,2.13917546887534,2.94628585473668,2.70506193518296,2.23679334990361,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,1.40843419776681,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,15.8101630386235,11.3101221679266,0,0,0,0,4.94309110035915,1.83000241127451,0.376963056338593,1.73824320192276,2.55715457330331,3.1168206683934,2.10913641988085,0.81471491080253,0.124406970610093,0,1.47309299120532,0,0.459804208866946,0.540186389416048,0.753524089178575,0.612328492361951,0.768682321709099,1.49922759295566,2.06962696591213,0,0.189106080167819,0.703804496655795,0.43839146485515,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,3.78521907415429,1.54356918568927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189709611372772,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0.814824882210129,1.52770577197669,0.469380496577004,0.837531287209079,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,4.0137647496948,2.10981035865966,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,4.81981974632711,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0.36012218806262,0.129358683782755,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0,3.52308073819968,0,0,0.370389054739423,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0.501572104035363,3.3885110557024,3.22227665555024,0.572895513439397,2.57779773515531,1.37016503954128,0.755393897389701,1.35004500046361,4.05289082901798,2.26571204492102,5.69536342927002,0,0.399024873401031,0.682934423016537,0.972426868273176,0.419226325255965,0,1.11123363900808,0.412070114477788,0.64183841918363,0,1.52087579934144,0.754505365544305,0.468207537349412,0.384150914429216,0.287177344778066,0,0.579421629724277,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.532427418478012,0.476872379894642,0.726732083161643,0.658765662907314,0.338458431566706,0.365855945745545,0,0.543216455383447,0,0.593175090620871,0.492522411877817,0,0.77468420592983,0.385813221962283,0.499621155875892,0.467863216890817,0.644613162144895,0.191288332068843,0,0|short_description=p7@Trpm3}} | ||
|EntrezGene=226025 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|UniProt=B2RUS0 | |||
|association_with_transcript=-119bp_to_NM_177341,uc008gzo.1_5end | |||
|description=CAGE_peak_7_at_Trpm3_5end | |||
|id=chr19:22522564..22522578,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.39e-10!23;CL:0000337!8.39e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.87e-09,23;CL:0000337,1.87e-09,23;CL:0002612,1.11e-07,3;CL:0002610,1.77e-07,3;CL:0000540,4.08e-07,33;CL:0000047,4.08e-07,33;CL:0000031,4.08e-07,33;CL:0000404,4.08e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.93e-24!63;UBERON:0002346!7.59e-22!71;UBERON:0003075!7.59e-22!71;UBERON:0007284!7.59e-22!71;UBERON:0001049!2.36e-20!52;UBERON:0005068!2.36e-20!52;UBERON:0006241!2.36e-20!52;UBERON:0007135!2.36e-20!52;UBERON:0004121!1.53e-19!102;UBERON:0000924!1.53e-19!102;UBERON:0006601!1.53e-19!102;UBERON:0000955!7.46e-19!50;UBERON:0006238!7.46e-19!50;UBERON:0002616!5.56e-18!49;UBERON:0001017!9.28e-18!73;UBERON:0005743!9.28e-18!73;UBERON:0003056!1.07e-17!49;UBERON:0000073!9.03e-17!75;UBERON:0001016!9.03e-17!75;UBERON:0002020!2.89e-16!34;UBERON:0007811!3.96e-14!86;UBERON:0000153!5.16e-14!94;UBERON:0003080!9.46e-14!40;UBERON:0002780!6.19e-13!39;UBERON:0001890!6.19e-13!39;UBERON:0006240!6.19e-13!39;UBERON:0002791!1.87e-12!29;UBERON:0003528!1.87e-12!29;UBERON:0001893!1.87e-12!29;UBERON:0002021!6.35e-09!10;UBERON:0000411!6.35e-09!10;UBERON:0001950!6.35e-09!10;UBERON:0000956!3.43e-08!21;UBERON:0001869!3.43e-08!21;UBERON:0000203!3.43e-08!21;UBERON:0003076!1.49e-07!12;UBERON:0003057!1.49e-07!12;UBERON:0002619!6.59e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.70e-30,54;UBERON:0001017,1.03e-27,73;UBERON:0001016,8.95e-27,75;UBERON:0001049,1.06e-26,52;UBERON:0005068,1.06e-26,52;UBERON:0006241,1.06e-26,52;UBERON:0007135,1.06e-26,52;UBERON:0002346,6.75e-26,64;UBERON:0003075,6.75e-26,64;UBERON:0007284,6.75e-26,64;UBERON:0004121,1.10e-25,95;UBERON:0000924,1.10e-25,95;UBERON:0006601,1.10e-25,95;UBERON:0010371,2.82e-25,73;UBERON:0000955,6.51e-21,47;UBERON:0006238,6.51e-21,47;UBERON:0002020,1.13e-19,34;UBERON:0002616,2.87e-19,46;UBERON:0010314,1.54e-18,92;UBERON:0003056,3.18e-15,49;UBERON:0003076,4.22e-15,12;UBERON:0003057,4.22e-15,12;UBERON:0003080,3.39e-14,40;UBERON:0003528,5.06e-14,29;UBERON:0002791,5.06e-14,29;UBERON:0001893,5.06e-14,29;UBERON:0002021,9.26e-14,10;UBERON:0000411,9.26e-14,10;UBERON:0001950,9.26e-14,10;UBERON:0002780,9.72e-13,39;UBERON:0001890,9.72e-13,39;UBERON:0006240,9.72e-13,39;UBERON:0002619,8.75e-12,17;UBERON:0000956,4.62e-11,21;UBERON:0001869,4.62e-11,21;UBERON:0000203,4.62e-11,21;UBERON:0004111,3.18e-10,122;UBERON:0002240,7.61e-10,6;UBERON:0005174,7.61e-10,6;UBERON:0001137,7.61e-10,6;UBERON:0000025,1.54e-09,114;UBERON:0001948,9.30e-08,5;UBERON:0002315,9.30e-08,5;UBERON:0002257,1.11e-07,3;UBERON:0004684,1.77e-07,3;UBERON:0002275,1.77e-07,3;UBERON:0000483,4.94e-07,174;UBERON:0011216,5.12e-07,194;UBERON:0004733,6.37e-07,6;UBERON:0004732,6.37e-07,6;UBERON:0002028,6.37e-07,6;UBERON:0007277,6.37e-07,6;UBERON:0000119,7.21e-07,176 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0.103689612308478,0.405017814995072,0.210324961351382,0.856952953211411,2.65042249141936,0,0.191690942036473,0,2.20231761998777,2.042997409363,3.22573719838111,0.527545150920775,0.823388792421687,1.04182674111352,0.279182999001381,1.68828783009504,2.13917546887534,2.94628585473668,2.70506193518296,2.23679334990361,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,1.40843419776681,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,15.8101630386235,11.3101221679266,0,0,0,0,4.94309110035915,1.83000241127451,0.376963056338593,1.73824320192276,2.55715457330331,3.1168206683934,2.10913641988085,0.81471491080253,0.124406970610093,0,1.47309299120532,0,0.459804208866946,0.540186389416048,0.753524089178575,0.612328492361951,0.768682321709099,1.49922759295566,2.06962696591213,0,0.189106080167819,0.703804496655795,0.43839146485515,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,3.78521907415429,1.54356918568927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189709611372772,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0.814824882210129,1.52770577197669,0.469380496577004,0.837531287209079,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,4.0137647496948,2.10981035865966,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,4.81981974632711,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0.36012218806262,0.129358683782755,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0,3.52308073819968,0,0,0.370389054739423,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0.501572104035363,3.3885110557024,3.22227665555024,0.572895513439397,2.57779773515531,1.37016503954128,0.755393897389701,1.35004500046361,4.05289082901798,2.26571204492102,5.69536342927002,0,0.399024873401031,0.682934423016537,0.972426868273176,0.419226325255965,0,1.11123363900808,0.412070114477788,0.64183841918363,0,1.52087579934144,0.754505365544305,0.468207537349412,0.384150914429216,0.287177344778066,0,0.579421629724277,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.532427418478012,0.476872379894642,0.726732083161643,0.658765662907314,0.338458431566706,0.365855945745545,0,0.543216455383447,0,0.593175090620871,0.492522411877817,0,0.77468420592983,0.385813221962283,0.499621155875892,0.467863216890817,0.644613162144895,0.191288332068843,0,0 | |||
|short_description=p7@Trpm3 | |||
}} |
Revision as of 17:11, 13 September 2013
Short description: | p7@Trpm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Trpm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | -119bp_to_NM_177341, uc008gzo.1_5end |
EntrezGene: | Trpm3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.87e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.87e-09 | 23 |
neuron of the ventral spinal cord | 1.11e-07 | 3 |
raphe nuclei neuron | 1.77e-07 | 3 |
neuron | 4.08e-07 | 33 |
neuronal stem cell | 4.08e-07 | 33 |
neuroblast | 4.08e-07 | 33 |
electrically signaling cell | 4.08e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.