FFCP PHASE1:Mm9::chr2:164786346..164786363,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=57138|HGNC=|MCL_coexpression_id=159|UniProt=Q91V14|association_with_transcript=-19bp_to_ENSMUST00000171274_5end|description=CAGE_peak_3_at_Slc12a5_5end|id=chr2:164786346..164786363,+|ontology_enrichment_celltype=CL:0000117!1.07e-11!23;CL:0000337!1.07e-11!23;CL:0000540!1.56e-07!33;CL:0000047!1.56e-07!33;CL:0000031!1.56e-07!33;CL:0000404!1.56e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.53e-14,23;CL:0000337,2.53e-14,23;CL:0000540,2.38e-07,33;CL:0000047,2.38e-07,33;CL:0000031,2.38e-07,33;CL:0000404,2.38e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.58e-24!71;UBERON:0003075!4.58e-24!71;UBERON:0007284!4.58e-24!71;UBERON:0001049!2.82e-20!52;UBERON:0005068!2.82e-20!52;UBERON:0006241!2.82e-20!52;UBERON:0007135!2.82e-20!52;UBERON:0000033!2.95e-20!63;UBERON:0001017!2.05e-19!73;UBERON:0005743!2.05e-19!73;UBERON:0003056!8.61e-19!49;UBERON:0000955!9.11e-19!50;UBERON:0006238!9.11e-19!50;UBERON:0002616!3.70e-18!49;UBERON:0000073!6.13e-18!75;UBERON:0001016!6.13e-18!75;UBERON:0004121!6.92e-18!102;UBERON:0000924!6.92e-18!102;UBERON:0006601!6.92e-18!102;UBERON:0003080!2.84e-15!40;UBERON:0002780!1.37e-14!39;UBERON:0001890!1.37e-14!39;UBERON:0006240!1.37e-14!39;UBERON:0002020!2.95e-14!34;UBERON:0007811!1.85e-11!86;UBERON:0002791!5.28e-11!29;UBERON:0003528!5.28e-11!29;UBERON:0001893!5.28e-11!29;UBERON:0000153!1.19e-10!94;UBERON:0002619!8.72e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.16e-26,54;UBERON:0002346,1.35e-26,64;UBERON:0003075,1.35e-26,64;UBERON:0007284,1.35e-26,64;UBERON:0001049,7.34e-25,52;UBERON:0005068,7.34e-25,52;UBERON:0006241,7.34e-25,52;UBERON:0007135,7.34e-25,52;UBERON:0003056,2.64e-22,49;UBERON:0001017,1.32e-21,73;UBERON:0010371,1.57e-20,73;UBERON:0001016,1.97e-20,75;UBERON:0000955,2.20e-20,47;UBERON:0006238,2.20e-20,47;UBERON:0002616,1.29e-19,46;UBERON:0004121,7.05e-19,95;UBERON:0000924,7.05e-19,95;UBERON:0006601,7.05e-19,95;UBERON:0003080,2.04e-18,40;UBERON:0002780,1.55e-17,39;UBERON:0001890,1.55e-17,39;UBERON:0006240,1.55e-17,39;UBERON:0002020,4.87e-17,34;UBERON:0010314,2.27e-16,92;UBERON:0003528,7.54e-13,29;UBERON:0002791,7.54e-13,29;UBERON:0001893,7.54e-13,29;UBERON:0002420,7.87e-08,8;UBERON:0007245,7.87e-08,8;UBERON:0010009,7.87e-08,8;UBERON:0010011,7.87e-08,8;UBERON:0000454,7.87e-08,8;UBERON:0002619,8.01e-08,17;UBERON:0002021,2.08e-07,10;UBERON:0000411,2.08e-07,10;UBERON:0001950,2.08e-07,10;UBERON:0000956,4.16e-07,21;UBERON:0001869,4.16e-07,21;UBERON:0000203,4.16e-07,21;UBERON:0003076,5.06e-07,12;UBERON:0003057,5.06e-07,12|phase1_expression=0.80074423552397,0,0,0.30246421130683,0,0.16787927191189,0.233612640595526,0.258246646883153,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0.42438965179803,2.04103896362567,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,1.5626706890476,2.61761871986899,1.17646297606203,1.36609096991689,0.971020706062307,0.125896817975577,0.811015449756117,0.550640256485045,0.782391344348039,0,0.439372365468944,0.58328969722285,0.279972843250725,0,0,0,0,0.257259436035947,0,0,15.9830004079082,18.5146842745212,20.9164363157039,0,0,0.899899717281399,0.988866362566974,0,1.79760066311043,0.768436610643109,1.03689612308478,0.675029691658453,0.210324961351382,37.7059299413021,25.8416192913388,2.81728838194394,2.1086003624012,3.67687514644008,23.1243350098716,15.3224805702225,18.4327839907492,16.6176722540044,18.0230657896747,21.8783615633839,20.3803589271008,20.2594539611405,22.7669389187447,27.4004584490511,22.2099822046601,13.2343606535963,0,0.0755715601067855,0,0,0.679971333707751,1.07940638327563,1.29955283489534,0,0.702222100658759,0,0,0,0.985903938436763,2.56652954828636,5.09610479413291,0,0,0,0,0.22836775943812,0.517875767294343,2.22663208597237,0.693941307064543,0.913396434936424,2.30615497256059,2.41156224884196,2.11659672844269,2.63899841792318,0,0,0,0.647067399789637,0.220841518460394,0.484875253135222,0,3.80615036115011,5.23616767033638,0.255457055208591,0,0.599902730993408,0,24.7154555017957,9.60751265919116,7.53926112677186,9.03886464999838,7.16003280524926,22.0255327233134,13.4660248346239,0.611036183101898,0.622034853050465,0.505445516867349,6.73413938836717,2.73252930221678,0.919608417733892,1.62055916824814,2.86339153887859,2.9255694635071,5.25266253167884,6.74652416830048,22.7658966250334,0.646703978798527,1.51284864134255,0.175951124163949,0.43839146485515,0.834141747676794,0.696504333044333,0.205782136407943,0.995171334092466,0,0,0,0.621377317606506,1.40715635988658,0.36012412292203,0.473489471170421,0.196764231747404,0.925602677324269,0.465067889500816,0,0.116765342367169,0.987359099480883,0.32833492815819,0.0810688095458557,0.292399974850665,0.219550115291051,0.671032093801859,5.67782861123144,2.6755199218614,0,0.264450566663544,1.06644125267617,1.85789337488351,1.03093969057675,0.80673409849337,0.444756087689741,0,0.474529061544512,0,0.502670417600539,0.596869416123452,0.58489226135736,0.898819408654221,0.432276099749388,0,0.5690037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| ||
|EntrezGene=57138 | |||
|HGNC= | |||
|MCL_coexpression_id=159 | |||
|UniProt=Q91V14 | |||
|association_with_transcript=-19bp_to_ENSMUST00000171274_5end | |||
|description=CAGE_peak_3_at_Slc12a5_5end | |||
|id=chr2:164786346..164786363,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.07e-11!23;CL:0000337!1.07e-11!23;CL:0000540!1.56e-07!33;CL:0000047!1.56e-07!33;CL:0000031!1.56e-07!33;CL:0000404!1.56e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.53e-14,23;CL:0000337,2.53e-14,23;CL:0000540,2.38e-07,33;CL:0000047,2.38e-07,33;CL:0000031,2.38e-07,33;CL:0000404,2.38e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.58e-24!71;UBERON:0003075!4.58e-24!71;UBERON:0007284!4.58e-24!71;UBERON:0001049!2.82e-20!52;UBERON:0005068!2.82e-20!52;UBERON:0006241!2.82e-20!52;UBERON:0007135!2.82e-20!52;UBERON:0000033!2.95e-20!63;UBERON:0001017!2.05e-19!73;UBERON:0005743!2.05e-19!73;UBERON:0003056!8.61e-19!49;UBERON:0000955!9.11e-19!50;UBERON:0006238!9.11e-19!50;UBERON:0002616!3.70e-18!49;UBERON:0000073!6.13e-18!75;UBERON:0001016!6.13e-18!75;UBERON:0004121!6.92e-18!102;UBERON:0000924!6.92e-18!102;UBERON:0006601!6.92e-18!102;UBERON:0003080!2.84e-15!40;UBERON:0002780!1.37e-14!39;UBERON:0001890!1.37e-14!39;UBERON:0006240!1.37e-14!39;UBERON:0002020!2.95e-14!34;UBERON:0007811!1.85e-11!86;UBERON:0002791!5.28e-11!29;UBERON:0003528!5.28e-11!29;UBERON:0001893!5.28e-11!29;UBERON:0000153!1.19e-10!94;UBERON:0002619!8.72e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.16e-26,54;UBERON:0002346,1.35e-26,64;UBERON:0003075,1.35e-26,64;UBERON:0007284,1.35e-26,64;UBERON:0001049,7.34e-25,52;UBERON:0005068,7.34e-25,52;UBERON:0006241,7.34e-25,52;UBERON:0007135,7.34e-25,52;UBERON:0003056,2.64e-22,49;UBERON:0001017,1.32e-21,73;UBERON:0010371,1.57e-20,73;UBERON:0001016,1.97e-20,75;UBERON:0000955,2.20e-20,47;UBERON:0006238,2.20e-20,47;UBERON:0002616,1.29e-19,46;UBERON:0004121,7.05e-19,95;UBERON:0000924,7.05e-19,95;UBERON:0006601,7.05e-19,95;UBERON:0003080,2.04e-18,40;UBERON:0002780,1.55e-17,39;UBERON:0001890,1.55e-17,39;UBERON:0006240,1.55e-17,39;UBERON:0002020,4.87e-17,34;UBERON:0010314,2.27e-16,92;UBERON:0003528,7.54e-13,29;UBERON:0002791,7.54e-13,29;UBERON:0001893,7.54e-13,29;UBERON:0002420,7.87e-08,8;UBERON:0007245,7.87e-08,8;UBERON:0010009,7.87e-08,8;UBERON:0010011,7.87e-08,8;UBERON:0000454,7.87e-08,8;UBERON:0002619,8.01e-08,17;UBERON:0002021,2.08e-07,10;UBERON:0000411,2.08e-07,10;UBERON:0001950,2.08e-07,10;UBERON:0000956,4.16e-07,21;UBERON:0001869,4.16e-07,21;UBERON:0000203,4.16e-07,21;UBERON:0003076,5.06e-07,12;UBERON:0003057,5.06e-07,12 | |||
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| |||
|short_description=p3@Slc12a5 | |||
}} |
Revision as of 22:55, 13 September 2013
Short description: | p3@Slc12a5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc12a5_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | -19bp_to_ENSMUST00000171274_5end |
EntrezGene: | Slc12a5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.53e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.53e-14 | 23 |
neuron | 2.38e-07 | 33 |
neuronal stem cell | 2.38e-07 | 33 |
neuroblast | 2.38e-07 | 33 |
electrically signaling cell | 2.38e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.