FFCP PHASE1:Mm9::chr2:29108946..29109011,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=731|UniProt=|association_with_transcript=-420bp_to_ENSMUST00000028141,ENSMUST00000154682_5end|description=CAGE_peak_1_at_ENSMUST00000028141_5end,CAGE_peak_1_at_ENSMUST00000154682_5end|id=chr2:29108946..29109011,-|ontology_enrichment_celltype=CL:0000117!1.20e-13!23;CL:0000337!1.20e-13!23;CL:0000540!4.14e-10!33;CL:0000047!4.14e-10!33;CL:0000031!4.14e-10!33;CL:0000404!4.14e-10!33;CL:0000221!4.31e-09!44;CL:0000133!4.31e-09!44;CL:0002319!1.45e-08!43;CL:0000393!4.55e-07!39;CL:0000211!4.55e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.25e-15,23;CL:0000337,2.25e-15,23;CL:0000540,2.36e-10,33;CL:0000047,2.36e-10,33;CL:0000031,2.36e-10,33;CL:0000404,2.36e-10,33;CL:0002609,2.86e-09,6;CL:0000221,3.56e-08,44;CL:0000133,3.56e-08,44;CL:0000393,6.48e-08,39;CL:0000211,6.48e-08,39;CL:0002319,1.67e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.42e-23!75;UBERON:0001016!6.42e-23!75;UBERON:0001017!1.45e-22!73;UBERON:0005743!1.45e-22!73;UBERON:0001049!1.55e-22!52;UBERON:0005068!1.55e-22!52;UBERON:0006241!1.55e-22!52;UBERON:0007135!1.55e-22!52;UBERON:0002020!3.13e-22!34;UBERON:0003080!8.39e-22!40;UBERON:0000033!1.34e-21!63;UBERON:0003056!1.55e-21!49;UBERON:0000955!2.30e-21!50;UBERON:0006238!2.30e-21!50;UBERON:0002780!2.41e-21!39;UBERON:0001890!2.41e-21!39;UBERON:0006240!2.41e-21!39;UBERON:0002616!1.07e-20!49;UBERON:0002791!1.31e-20!29;UBERON:0003528!1.31e-20!29;UBERON:0001893!1.31e-20!29;UBERON:0004121!1.94e-20!102;UBERON:0000924!1.94e-20!102;UBERON:0006601!1.94e-20!102;UBERON:0002346!3.66e-19!71;UBERON:0003075!3.66e-19!71;UBERON:0007284!3.66e-19!71;UBERON:0000956!1.59e-15!21;UBERON:0001869!1.59e-15!21;UBERON:0000203!1.59e-15!21;UBERON:0007811!5.88e-13!86;UBERON:0002619!4.50e-12!17;UBERON:0000153!8.94e-12!94;UBERON:0002021!2.33e-09!10;UBERON:0000411!2.33e-09!10;UBERON:0001950!2.33e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.84e-29,29;UBERON:0002791,2.84e-29,29;UBERON:0001893,2.84e-29,29;UBERON:0002020,3.42e-27,34;UBERON:0003080,1.20e-23,40;UBERON:0002780,6.17e-23,39;UBERON:0001890,6.17e-23,39;UBERON:0006240,6.17e-23,39;UBERON:0000956,6.39e-23,21;UBERON:0001869,6.39e-23,21;UBERON:0000203,6.39e-23,21;UBERON:0000955,6.99e-23,47;UBERON:0006238,6.99e-23,47;UBERON:0000073,1.29e-22,54;UBERON:0002616,6.47e-22,46;UBERON:0001017,2.19e-21,73;UBERON:0001049,8.70e-21,52;UBERON:0005068,8.70e-21,52;UBERON:0006241,8.70e-21,52;UBERON:0007135,8.70e-21,52;UBERON:0001016,1.80e-20,75;UBERON:0003056,1.11e-18,49;UBERON:0002619,1.95e-17,17;UBERON:0002346,7.04e-16,64;UBERON:0003075,7.04e-16,64;UBERON:0007284,7.04e-16,64;UBERON:0004121,2.43e-15,95;UBERON:0000924,2.43e-15,95;UBERON:0006601,2.43e-15,95;UBERON:0010371,7.31e-15,73;UBERON:0002021,5.22e-14,10;UBERON:0000411,5.22e-14,10;UBERON:0001950,5.22e-14,10;UBERON:0010314,1.33e-09,92;UBERON:0002420,1.82e-07,8;UBERON:0007245,1.82e-07,8;UBERON:0010009,1.82e-07,8;UBERON:0010011,1.82e-07,8;UBERON:0000454,1.82e-07,8|phase1_expression=8.32774004944929,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.936258105287974,0.171217968225505,0.159544317990673,0,0,0,0,0,0,0,0,1.9559956734746,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,16.9945827122062,17.4567023159771,7.60597684207415,0,0,0,0,0,0.299600110518405,1.92109152660777,29.6552291202246,32.6714370762691,31.3384192413559,1.99955689082663,0.220868540951614,17.6386750869534,14.8560480078266,15.6267193723704,0,5.49055553766307,2.4577045320999,7.38563211289086,8.59983849862651,6.77187381723788,0.558365998002762,4.50210088025344,6.87592114995646,0.883885756421003,1.28134512719193,0.931997229126503,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0,0,0,0,6.4787973097273,0,0,0,0,0,0,0.5709193985953,0,0,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.49790639404823,5.49000723382352,3.76963056338593,19.8159725019195,23.7815375317207,2.28566849015516,8.59878694259116,0.101839363850316,0,0,0,0.260240885925407,0,0.360124259610698,0.150704817835715,0.476255494059295,0.512454881139399,0.281105173679186,1.03481348295606,0,0.189106080167819,0,0,0.556094498451196,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.5390013073375,26.755199218614,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.478364305972461,0,0.172684981865896,0,0,0,0.491764273019036,0.551873492609465,1.12385412991454,1.17211686592203,0,0,0,0,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0,0,3.85585579706168,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0.16488625294148,0,0.180938774784468,0,0,0.291480836629851,0.741701208042039,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0.138199973804424,0,0.316335993581135,0,0,0,0,0,0.165306911450672,0,0,0,0,0.299033092087958,0.330916980914195,0,0.387479470433193,0,0,0,0.209718688851422,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,23.1548255472997,25.7782132444019,22.3429250241365,19.9349691518678,17.8121455140367,12.8416962556249,24.9758325085768,14.8605997063993,8.15656336171568,21.2281727818246,0.207574695168353,0.798049746802062,0.853668028770671,2.67417388775123,2.51535795153579,3.8607136774503,2.22246727801615,1.64828045791115,1.60459604795908,1.01078884705519,3.29523089857312,3.01802146217722,2.1537546718073,1.79270426733634,2.75690250986944,2.85776214769844,2.0859178670074,1.54327376370964,1.23625770240992,1.03039244094078,1.71434626192708,1.77475806159337,0.715308569841963,2.0348498328526,2.25862512996793,3.29996970777538,2.56099162021882,1.05227884575137,2.44447404922551,1.12228454331548,1.18635018124174,1.77308068276014,0.818462086339379,0.929621047115796,1.54325288784913,7.24450676020043,1.63752125911786,2.36358159453128,0,0,0.231867835620421|short_description=p1@ENSMUST00000028141,p1@ENSMUST00000154682}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=731 | |||
|UniProt= | |||
|association_with_transcript=-420bp_to_ENSMUST00000028141,ENSMUST00000154682_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000028141_5end,CAGE_peak_1_at_ENSMUST00000154682_5end | |||
|id=chr2:29108946..29109011,- | |||
|ontology_enrichment_celltype=CL:0000117!1.20e-13!23;CL:0000337!1.20e-13!23;CL:0000540!4.14e-10!33;CL:0000047!4.14e-10!33;CL:0000031!4.14e-10!33;CL:0000404!4.14e-10!33;CL:0000221!4.31e-09!44;CL:0000133!4.31e-09!44;CL:0002319!1.45e-08!43;CL:0000393!4.55e-07!39;CL:0000211!4.55e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.25e-15,23;CL:0000337,2.25e-15,23;CL:0000540,2.36e-10,33;CL:0000047,2.36e-10,33;CL:0000031,2.36e-10,33;CL:0000404,2.36e-10,33;CL:0002609,2.86e-09,6;CL:0000221,3.56e-08,44;CL:0000133,3.56e-08,44;CL:0000393,6.48e-08,39;CL:0000211,6.48e-08,39;CL:0002319,1.67e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.42e-23!75;UBERON:0001016!6.42e-23!75;UBERON:0001017!1.45e-22!73;UBERON:0005743!1.45e-22!73;UBERON:0001049!1.55e-22!52;UBERON:0005068!1.55e-22!52;UBERON:0006241!1.55e-22!52;UBERON:0007135!1.55e-22!52;UBERON:0002020!3.13e-22!34;UBERON:0003080!8.39e-22!40;UBERON:0000033!1.34e-21!63;UBERON:0003056!1.55e-21!49;UBERON:0000955!2.30e-21!50;UBERON:0006238!2.30e-21!50;UBERON:0002780!2.41e-21!39;UBERON:0001890!2.41e-21!39;UBERON:0006240!2.41e-21!39;UBERON:0002616!1.07e-20!49;UBERON:0002791!1.31e-20!29;UBERON:0003528!1.31e-20!29;UBERON:0001893!1.31e-20!29;UBERON:0004121!1.94e-20!102;UBERON:0000924!1.94e-20!102;UBERON:0006601!1.94e-20!102;UBERON:0002346!3.66e-19!71;UBERON:0003075!3.66e-19!71;UBERON:0007284!3.66e-19!71;UBERON:0000956!1.59e-15!21;UBERON:0001869!1.59e-15!21;UBERON:0000203!1.59e-15!21;UBERON:0007811!5.88e-13!86;UBERON:0002619!4.50e-12!17;UBERON:0000153!8.94e-12!94;UBERON:0002021!2.33e-09!10;UBERON:0000411!2.33e-09!10;UBERON:0001950!2.33e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.84e-29,29;UBERON:0002791,2.84e-29,29;UBERON:0001893,2.84e-29,29;UBERON:0002020,3.42e-27,34;UBERON:0003080,1.20e-23,40;UBERON:0002780,6.17e-23,39;UBERON:0001890,6.17e-23,39;UBERON:0006240,6.17e-23,39;UBERON:0000956,6.39e-23,21;UBERON:0001869,6.39e-23,21;UBERON:0000203,6.39e-23,21;UBERON:0000955,6.99e-23,47;UBERON:0006238,6.99e-23,47;UBERON:0000073,1.29e-22,54;UBERON:0002616,6.47e-22,46;UBERON:0001017,2.19e-21,73;UBERON:0001049,8.70e-21,52;UBERON:0005068,8.70e-21,52;UBERON:0006241,8.70e-21,52;UBERON:0007135,8.70e-21,52;UBERON:0001016,1.80e-20,75;UBERON:0003056,1.11e-18,49;UBERON:0002619,1.95e-17,17;UBERON:0002346,7.04e-16,64;UBERON:0003075,7.04e-16,64;UBERON:0007284,7.04e-16,64;UBERON:0004121,2.43e-15,95;UBERON:0000924,2.43e-15,95;UBERON:0006601,2.43e-15,95;UBERON:0010371,7.31e-15,73;UBERON:0002021,5.22e-14,10;UBERON:0000411,5.22e-14,10;UBERON:0001950,5.22e-14,10;UBERON:0010314,1.33e-09,92;UBERON:0002420,1.82e-07,8;UBERON:0007245,1.82e-07,8;UBERON:0010009,1.82e-07,8;UBERON:0010011,1.82e-07,8;UBERON:0000454,1.82e-07,8 | |||
|phase1_expression=8.32774004944929,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.936258105287974,0.171217968225505,0.159544317990673,0,0,0,0,0,0,0,0,1.9559956734746,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,16.9945827122062,17.4567023159771,7.60597684207415,0,0,0,0,0,0.299600110518405,1.92109152660777,29.6552291202246,32.6714370762691,31.3384192413559,1.99955689082663,0.220868540951614,17.6386750869534,14.8560480078266,15.6267193723704,0,5.49055553766307,2.4577045320999,7.38563211289086,8.59983849862651,6.77187381723788,0.558365998002762,4.50210088025344,6.87592114995646,0.883885756421003,1.28134512719193,0.931997229126503,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0,0,0,0,6.4787973097273,0,0,0,0,0,0,0.5709193985953,0,0,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.49790639404823,5.49000723382352,3.76963056338593,19.8159725019195,23.7815375317207,2.28566849015516,8.59878694259116,0.101839363850316,0,0,0,0.260240885925407,0,0.360124259610698,0.150704817835715,0.476255494059295,0.512454881139399,0.281105173679186,1.03481348295606,0,0.189106080167819,0,0,0.556094498451196,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.5390013073375,26.755199218614,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.478364305972461,0,0.172684981865896,0,0,0,0.491764273019036,0.551873492609465,1.12385412991454,1.17211686592203,0,0,0,0,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0,0,3.85585579706168,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0.16488625294148,0,0.180938774784468,0,0,0.291480836629851,0.741701208042039,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0.138199973804424,0,0.316335993581135,0,0,0,0,0,0.165306911450672,0,0,0,0,0.299033092087958,0.330916980914195,0,0.387479470433193,0,0,0,0.209718688851422,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,23.1548255472997,25.7782132444019,22.3429250241365,19.9349691518678,17.8121455140367,12.8416962556249,24.9758325085768,14.8605997063993,8.15656336171568,21.2281727818246,0.207574695168353,0.798049746802062,0.853668028770671,2.67417388775123,2.51535795153579,3.8607136774503,2.22246727801615,1.64828045791115,1.60459604795908,1.01078884705519,3.29523089857312,3.01802146217722,2.1537546718073,1.79270426733634,2.75690250986944,2.85776214769844,2.0859178670074,1.54327376370964,1.23625770240992,1.03039244094078,1.71434626192708,1.77475806159337,0.715308569841963,2.0348498328526,2.25862512996793,3.29996970777538,2.56099162021882,1.05227884575137,2.44447404922551,1.12228454331548,1.18635018124174,1.77308068276014,0.818462086339379,0.929621047115796,1.54325288784913,7.24450676020043,1.63752125911786,2.36358159453128,0,0,0.231867835620421 | |||
|short_description=p1@ENSMUST00000028141,p1@ENSMUST00000154682 | |||
}} |
Revision as of 23:38, 13 September 2013
Short description: | p1@ENSMUST00000028141, p1@ENSMUST00000154682 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000028141_5end, CAGE_peak_1_at_ENSMUST00000154682_5end |
Coexpression cluster: | MCL_coexpression_mm9:731 |
Association with transcript: | -420bp_to_ENSMUST00000028141, ENSMUST00000154682_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.25e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.25e-15 | 23 |
neuron | 2.36e-10 | 33 |
neuronal stem cell | 2.36e-10 | 33 |
neuroblast | 2.36e-10 | 33 |
electrically signaling cell | 2.36e-10 | 33 |
neuron of cerebral cortex | 2.86e-09 | 6 |
ectodermal cell | 3.56e-08 | 44 |
neurectodermal cell | 3.56e-08 | 44 |
electrically responsive cell | 6.48e-08 | 39 |
electrically active cell | 6.48e-08 | 39 |
neural cell | 1.67e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.