FFCP PHASE1:Mm9::chr3:103664269..103664282,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19260|HGNC=|MCL_coexpression_id=7|UniProt=P29352|association_with_transcript=54bp_to_NM_008979,uc008qtv.1_5end|description=CAGE_peak_3_at_Ptpn22_5end|id=chr3:103664269..103664282,+|ontology_enrichment_celltype=CL:0000988!2.30e-11!32;CL:0002032!2.30e-11!32;CL:0000037!2.30e-11!32;CL:0000566!2.30e-11!32;CL:0000837!2.30e-11!32;CL:0000838!2.80e-11!12;CL:0000084!1.02e-10!11;CL:0000827!1.02e-10!11;CL:0000542!5.48e-10!13;CL:0000051!5.48e-10!13;CL:0000791!2.06e-09!9;CL:0000789!2.06e-09!9;CL:0002420!2.06e-09!9;CL:0002419!2.06e-09!9;CL:0000790!2.06e-09!9;CL:0002031!8.59e-09!25;CL:0000624!1.64e-08!8;CL:0000738!1.08e-07!17;CL:0002087!1.08e-07!17;CL:0000893!7.97e-07!6;CL:0002489!7.97e-07!6;CL:0000898!7.97e-07!6;CL:0000809!7.97e-07!6;CL:0000810!7.97e-07!6;CL:0000895!7.97e-07!6;CL:0000808!7.97e-07!6;CL:0000894!7.97e-07!6;CL:0000806!7.97e-07!6;CL:0000807!7.97e-07!6;CL:0000805!7.97e-07!6;CL:0002425!7.97e-07!6;CL:0002436!7.97e-07!6;CL:0002427!7.97e-07!6;CL:0002428!7.97e-07!6;CL:0002429!7.97e-07!6;CL:0002433!7.97e-07!6;CL:0002431!7.97e-07!6;CL:0002432!7.97e-07!6|ontology_enrichment_celltype_v019_2=CL:0000988,1.79e-22,32;CL:0002032,1.79e-22,32;CL:0000037,1.79e-22,32;CL:0000837,1.79e-22,32;CL:0000838,3.34e-20,12;CL:0000084,4.03e-19,11;CL:0000827,4.03e-19,11;CL:0002031,1.03e-18,25;CL:0000542,2.21e-18,13;CL:0000051,2.21e-18,13;CL:0000791,1.28e-16,9;CL:0000789,1.28e-16,9;CL:0002420,1.28e-16,9;CL:0002419,1.28e-16,9;CL:0000790,1.28e-16,9;CL:0000738,2.23e-15,17;CL:0002087,2.23e-15,17;CL:0000624,6.80e-15,8;CL:0002320,1.29e-13,46;CL:0000134,1.29e-13,46;CL:0000893,1.14e-11,6;CL:0002489,1.14e-11,6;CL:0000898,1.14e-11,6;CL:0000809,1.14e-11,6;CL:0000810,1.14e-11,6;CL:0000895,1.14e-11,6;CL:0000808,1.14e-11,6;CL:0000894,1.14e-11,6;CL:0000806,1.14e-11,6;CL:0000807,1.14e-11,6;CL:0000805,1.14e-11,6;CL:0002425,1.14e-11,6;CL:0002436,1.14e-11,6;CL:0002427,1.14e-11,6;CL:0002428,1.14e-11,6;CL:0002429,1.14e-11,6;CL:0002433,1.14e-11,6;CL:0002431,1.14e-11,6;CL:0002432,1.14e-11,6;CL:0000219,1.16e-10,54;CL:0000049,1.58e-07,19;CL:0000553,9.92e-07,6;CL:0000556,9.92e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.94e-18!48;UBERON:0002390!4.97e-16!45;UBERON:0003061!4.97e-16!45;UBERON:0004177!1.00e-15!29;UBERON:0000072!6.96e-14!27;UBERON:0003408!1.91e-13!24;UBERON:0002370!6.14e-13!23;UBERON:0000974!6.14e-13!23;UBERON:0004807!6.14e-13!23;UBERON:0005058!6.14e-13!23;UBERON:0003351!6.14e-13!23;UBERON:0009113!6.14e-13!23;UBERON:0003295!6.14e-13!23;UBERON:0009722!6.14e-13!23;UBERON:0005562!6.14e-13!23;UBERON:0007690!6.14e-13!23;UBERON:0001004!9.60e-13!42;UBERON:0000065!2.98e-12!41;UBERON:0006562!5.06e-12!24;UBERON:0001557!5.06e-12!24;UBERON:0001042!5.06e-12!24;UBERON:0008814!5.06e-12!24;UBERON:0009145!5.06e-12!24;UBERON:0002405!1.03e-11!70;UBERON:0000063!1.67e-09!35;UBERON:0005057!2.23e-08!51;UBERON:0003081!2.93e-08!88;UBERON:0004119!2.74e-07!130;UBERON:0000925!2.74e-07!130;UBERON:0006595!2.74e-07!130;UBERON:0000077!7.86e-07!97;UBERON:0001007!9.40e-07!128;UBERON:0001555!9.40e-07!128;UBERON:0007026!9.40e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.59e-30,48;UBERON:0002405,5.59e-30,48;UBERON:0002390,4.13e-28,45;UBERON:0003061,4.13e-28,45;UBERON:0000072,4.63e-26,27;UBERON:0003408,1.16e-24,24;UBERON:0002370,1.10e-23,23;UBERON:0000974,1.10e-23,23;UBERON:0004807,1.10e-23,23;UBERON:0005058,1.10e-23,23;UBERON:0003351,1.10e-23,23;UBERON:0009113,1.10e-23,23;UBERON:0003295,1.10e-23,23;UBERON:0009722,1.10e-23,23;UBERON:0005562,1.10e-23,23;UBERON:0007690,1.10e-23,23;UBERON:0004177,1.76e-23,29;UBERON:0005057,1.76e-23,29;UBERON:0006562,1.86e-22,24;UBERON:0001557,1.86e-22,24;UBERON:0001042,1.86e-22,24;UBERON:0008814,1.86e-22,24;UBERON:0009145,1.86e-22,24;UBERON:0000077,3.53e-20,35;UBERON:0001004,3.28e-17,42;UBERON:0000065,2.39e-16,41;UBERON:0007811,1.82e-14,36;UBERON:0002384,1.29e-13,46;UBERON:0003081,2.08e-12,87;UBERON:0000153,3.44e-11,43;UBERON:0000926,1.16e-08,120;UBERON:0004120,1.16e-08,120;UBERON:0006603,1.16e-08,120;UBERON:0001041,4.22e-08,80;UBERON:0003929,8.45e-07,55|phase1_expression=0,0,0,0,0,0,0,8.52213934714403,258.48809387046,188.656008215527,56.5019295144166,45.8689914223184,20.8864890516071,9.61624426608971,1.33243904726265,2.63217847606774,0,4.88966356305268,5.21034847701807,8.91218268775863,0.255129870453209,3.97163804803541,1.82839852397255,1.75991665072747,0.91763712426868,0,0,0.215471232685889,0.570070258369122,1.00812051903972,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,1.25559489221072,0,1.57057123192139,0,0,0,0,0,0,0,0,0,0,0,0,1.67782606057736,39.1695556686126,83.0151683881886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,3.68034769719064,2.78695852022608,1.01104889002957,1.25602267690966,13.7237078333001,0.742210695324124,0,0,0,0,0,0,0,0.289198713839823,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0,1.53274233125155,2.39630249011841,0.599902730993408,2.92261522268049,0.149790639404823,0,0,0.173824320192276,0,0,0,0,0.622034853050465,7.32895999457657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,1.80143534980301,1.42081749697796,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0.134206418760372,0,0,1.65209391491899,0,0,0.232236671860439,0.128867461322093,0.403367049246685,0,0,0.474529061544512,0,0.251335208800269,0,0,0,0.432276099749388,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0,0,1.29327233116623,0,0,0,0,0.167506257441816,0,0,0.315270288212382,0.664394068946325,0.159454768657487,0.81931657357869,0.518054945597687,0.867894351489069,0,1.63171705145613,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0.178065603667255,0.162886959353576,0.824850614862677,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87737366450968,0.21183207086382,0,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,0,1.87957968877638,0.412773735926445,1.11116716421827,0.941842285023455,0.410082683163076,1.37266903923914,5.60928818979723,3.07893195112048,3.45499934511059,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0,0.259229946583586,1.24267862617385,0,0,0,0,0,0,0.117357238645754,0,0,0,0.576060012515731,10.1123558601017,0.202725215290164,1.43795340030758,2.46849563657811,3.75956060901711,6.75516606256301,3.96644983415897,3.10148007066612,5.85605409699256,3.50551310612999,4.83965688656834,4.19068887180935,5.19543944857779,5.96072201126002,0,0,0,0,0.386379188064381,3.56596703357246,0.36630324853453,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0.436039249896986,0,0.0846146078916765,0.182927972872773,0.526139422875686,0,0,0.118635018124174,0.0985044823755635,0,0,0,0.499621155875892,0.233931608445408,0,0.382576664137687,0,0|short_description=p3@Ptpn22}} | ||
|EntrezGene=19260 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=P29352 | |||
|association_with_transcript=54bp_to_NM_008979,uc008qtv.1_5end | |||
|description=CAGE_peak_3_at_Ptpn22_5end | |||
|id=chr3:103664269..103664282,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.30e-11!32;CL:0002032!2.30e-11!32;CL:0000037!2.30e-11!32;CL:0000566!2.30e-11!32;CL:0000837!2.30e-11!32;CL:0000838!2.80e-11!12;CL:0000084!1.02e-10!11;CL:0000827!1.02e-10!11;CL:0000542!5.48e-10!13;CL:0000051!5.48e-10!13;CL:0000791!2.06e-09!9;CL:0000789!2.06e-09!9;CL:0002420!2.06e-09!9;CL:0002419!2.06e-09!9;CL:0000790!2.06e-09!9;CL:0002031!8.59e-09!25;CL:0000624!1.64e-08!8;CL:0000738!1.08e-07!17;CL:0002087!1.08e-07!17;CL:0000893!7.97e-07!6;CL:0002489!7.97e-07!6;CL:0000898!7.97e-07!6;CL:0000809!7.97e-07!6;CL:0000810!7.97e-07!6;CL:0000895!7.97e-07!6;CL:0000808!7.97e-07!6;CL:0000894!7.97e-07!6;CL:0000806!7.97e-07!6;CL:0000807!7.97e-07!6;CL:0000805!7.97e-07!6;CL:0002425!7.97e-07!6;CL:0002436!7.97e-07!6;CL:0002427!7.97e-07!6;CL:0002428!7.97e-07!6;CL:0002429!7.97e-07!6;CL:0002433!7.97e-07!6;CL:0002431!7.97e-07!6;CL:0002432!7.97e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.79e-22,32;CL:0002032,1.79e-22,32;CL:0000037,1.79e-22,32;CL:0000837,1.79e-22,32;CL:0000838,3.34e-20,12;CL:0000084,4.03e-19,11;CL:0000827,4.03e-19,11;CL:0002031,1.03e-18,25;CL:0000542,2.21e-18,13;CL:0000051,2.21e-18,13;CL:0000791,1.28e-16,9;CL:0000789,1.28e-16,9;CL:0002420,1.28e-16,9;CL:0002419,1.28e-16,9;CL:0000790,1.28e-16,9;CL:0000738,2.23e-15,17;CL:0002087,2.23e-15,17;CL:0000624,6.80e-15,8;CL:0002320,1.29e-13,46;CL:0000134,1.29e-13,46;CL:0000893,1.14e-11,6;CL:0002489,1.14e-11,6;CL:0000898,1.14e-11,6;CL:0000809,1.14e-11,6;CL:0000810,1.14e-11,6;CL:0000895,1.14e-11,6;CL:0000808,1.14e-11,6;CL:0000894,1.14e-11,6;CL:0000806,1.14e-11,6;CL:0000807,1.14e-11,6;CL:0000805,1.14e-11,6;CL:0002425,1.14e-11,6;CL:0002436,1.14e-11,6;CL:0002427,1.14e-11,6;CL:0002428,1.14e-11,6;CL:0002429,1.14e-11,6;CL:0002433,1.14e-11,6;CL:0002431,1.14e-11,6;CL:0002432,1.14e-11,6;CL:0000219,1.16e-10,54;CL:0000049,1.58e-07,19;CL:0000553,9.92e-07,6;CL:0000556,9.92e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.94e-18!48;UBERON:0002390!4.97e-16!45;UBERON:0003061!4.97e-16!45;UBERON:0004177!1.00e-15!29;UBERON:0000072!6.96e-14!27;UBERON:0003408!1.91e-13!24;UBERON:0002370!6.14e-13!23;UBERON:0000974!6.14e-13!23;UBERON:0004807!6.14e-13!23;UBERON:0005058!6.14e-13!23;UBERON:0003351!6.14e-13!23;UBERON:0009113!6.14e-13!23;UBERON:0003295!6.14e-13!23;UBERON:0009722!6.14e-13!23;UBERON:0005562!6.14e-13!23;UBERON:0007690!6.14e-13!23;UBERON:0001004!9.60e-13!42;UBERON:0000065!2.98e-12!41;UBERON:0006562!5.06e-12!24;UBERON:0001557!5.06e-12!24;UBERON:0001042!5.06e-12!24;UBERON:0008814!5.06e-12!24;UBERON:0009145!5.06e-12!24;UBERON:0002405!1.03e-11!70;UBERON:0000063!1.67e-09!35;UBERON:0005057!2.23e-08!51;UBERON:0003081!2.93e-08!88;UBERON:0004119!2.74e-07!130;UBERON:0000925!2.74e-07!130;UBERON:0006595!2.74e-07!130;UBERON:0000077!7.86e-07!97;UBERON:0001007!9.40e-07!128;UBERON:0001555!9.40e-07!128;UBERON:0007026!9.40e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.59e-30,48;UBERON:0002405,5.59e-30,48;UBERON:0002390,4.13e-28,45;UBERON:0003061,4.13e-28,45;UBERON:0000072,4.63e-26,27;UBERON:0003408,1.16e-24,24;UBERON:0002370,1.10e-23,23;UBERON:0000974,1.10e-23,23;UBERON:0004807,1.10e-23,23;UBERON:0005058,1.10e-23,23;UBERON:0003351,1.10e-23,23;UBERON:0009113,1.10e-23,23;UBERON:0003295,1.10e-23,23;UBERON:0009722,1.10e-23,23;UBERON:0005562,1.10e-23,23;UBERON:0007690,1.10e-23,23;UBERON:0004177,1.76e-23,29;UBERON:0005057,1.76e-23,29;UBERON:0006562,1.86e-22,24;UBERON:0001557,1.86e-22,24;UBERON:0001042,1.86e-22,24;UBERON:0008814,1.86e-22,24;UBERON:0009145,1.86e-22,24;UBERON:0000077,3.53e-20,35;UBERON:0001004,3.28e-17,42;UBERON:0000065,2.39e-16,41;UBERON:0007811,1.82e-14,36;UBERON:0002384,1.29e-13,46;UBERON:0003081,2.08e-12,87;UBERON:0000153,3.44e-11,43;UBERON:0000926,1.16e-08,120;UBERON:0004120,1.16e-08,120;UBERON:0006603,1.16e-08,120;UBERON:0001041,4.22e-08,80;UBERON:0003929,8.45e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,8.52213934714403,258.48809387046,188.656008215527,56.5019295144166,45.8689914223184,20.8864890516071,9.61624426608971,1.33243904726265,2.63217847606774,0,4.88966356305268,5.21034847701807,8.91218268775863,0.255129870453209,3.97163804803541,1.82839852397255,1.75991665072747,0.91763712426868,0,0,0.215471232685889,0.570070258369122,1.00812051903972,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,1.25559489221072,0,1.57057123192139,0,0,0,0,0,0,0,0,0,0,0,0,1.67782606057736,39.1695556686126,83.0151683881886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,3.68034769719064,2.78695852022608,1.01104889002957,1.25602267690966,13.7237078333001,0.742210695324124,0,0,0,0,0,0,0,0.289198713839823,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0,1.53274233125155,2.39630249011841,0.599902730993408,2.92261522268049,0.149790639404823,0,0,0.173824320192276,0,0,0,0,0.622034853050465,7.32895999457657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,1.80143534980301,1.42081749697796,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0.134206418760372,0,0,1.65209391491899,0,0,0.232236671860439,0.128867461322093,0.403367049246685,0,0,0.474529061544512,0,0.251335208800269,0,0,0,0.432276099749388,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0,0,1.29327233116623,0,0,0,0,0.167506257441816,0,0,0.315270288212382,0.664394068946325,0.159454768657487,0.81931657357869,0.518054945597687,0.867894351489069,0,1.63171705145613,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0.178065603667255,0.162886959353576,0.824850614862677,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87737366450968,0.21183207086382,0,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,0,1.87957968877638,0.412773735926445,1.11116716421827,0.941842285023455,0.410082683163076,1.37266903923914,5.60928818979723,3.07893195112048,3.45499934511059,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0,0.259229946583586,1.24267862617385,0,0,0,0,0,0,0.117357238645754,0,0,0,0.576060012515731,10.1123558601017,0.202725215290164,1.43795340030758,2.46849563657811,3.75956060901711,6.75516606256301,3.96644983415897,3.10148007066612,5.85605409699256,3.50551310612999,4.83965688656834,4.19068887180935,5.19543944857779,5.96072201126002,0,0,0,0,0.386379188064381,3.56596703357246,0.36630324853453,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0.436039249896986,0,0.0846146078916765,0.182927972872773,0.526139422875686,0,0,0.118635018124174,0.0985044823755635,0,0,0,0.499621155875892,0.233931608445408,0,0.382576664137687,0,0 | |||
|short_description=p3@Ptpn22 | |||
}} |
Revision as of 01:04, 14 September 2013
Short description: | p3@Ptpn22 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ptpn22_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 54bp_to_NM_008979, uc008qtv.1_5end |
EntrezGene: | Ptpn22 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.