FFCP PHASE1:Mm9::chr5:24491658..24491680,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70258|HGNC=|MCL_coexpression_id=22|UniProt=Q9DB06|association_with_transcript=0bp_to_ENSMUST00000075081,uc008wsp.1_5end|description=CAGE_peak_1_at_1500035N22Rik_5end|id=chr5:24491658..24491680,+|ontology_enrichment_celltype=CL:0000117!1.32e-14!23;CL:0000337!1.32e-14!23;CL:0000540!1.36e-07!33;CL:0000047!1.36e-07!33;CL:0000031!1.36e-07!33;CL:0000404!1.36e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.58e-19,23;CL:0000337,1.58e-19,23;CL:0000540,2.23e-11,33;CL:0000047,2.23e-11,33;CL:0000031,2.23e-11,33;CL:0000404,2.23e-11,33;CL:0000393,1.38e-08,39;CL:0000211,1.38e-08,39;CL:0002609,4.13e-08,6;CL:0002319,7.00e-08,43;CL:0000221,1.49e-07,44;CL:0000133,1.49e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.90e-27!52;UBERON:0005068!2.90e-27!52;UBERON:0006241!2.90e-27!52;UBERON:0007135!2.90e-27!52;UBERON:0000955!1.08e-25!50;UBERON:0006238!1.08e-25!50;UBERON:0002616!4.91e-25!49;UBERON:0003080!1.27e-23!40;UBERON:0001017!2.64e-23!73;UBERON:0005743!2.64e-23!73;UBERON:0002780!4.84e-23!39;UBERON:0001890!4.84e-23!39;UBERON:0006240!4.84e-23!39;UBERON:0002346!3.01e-22!71;UBERON:0003075!3.01e-22!71;UBERON:0007284!3.01e-22!71;UBERON:0000073!6.16e-22!75;UBERON:0001016!6.16e-22!75;UBERON:0002020!2.53e-21!34;UBERON:0000033!5.31e-21!63;UBERON:0003056!8.86e-21!49;UBERON:0002791!1.96e-18!29;UBERON:0003528!1.96e-18!29;UBERON:0001893!1.96e-18!29;UBERON:0004121!3.25e-16!102;UBERON:0000924!3.25e-16!102;UBERON:0006601!3.25e-16!102;UBERON:0000025!1.58e-15!114;UBERON:0000956!1.52e-13!21;UBERON:0001869!1.52e-13!21;UBERON:0000203!1.52e-13!21;UBERON:0004111!4.70e-13!122;UBERON:0002619!7.70e-11!17;UBERON:0007811!1.19e-10!86;UBERON:0000153!8.57e-09!94;UBERON:0002021!7.83e-08!10;UBERON:0000411!7.83e-08!10;UBERON:0001950!7.83e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.10e-31,54;UBERON:0001049,2.44e-29,52;UBERON:0005068,2.44e-29,52;UBERON:0006241,2.44e-29,52;UBERON:0007135,2.44e-29,52;UBERON:0003080,4.41e-28,40;UBERON:0002780,3.12e-27,39;UBERON:0001890,3.12e-27,39;UBERON:0006240,3.12e-27,39;UBERON:0000955,9.78e-27,47;UBERON:0006238,9.78e-27,47;UBERON:0001017,1.93e-26,73;UBERON:0002616,7.93e-26,46;UBERON:0002020,8.23e-26,34;UBERON:0001016,2.69e-25,75;UBERON:0002346,3.60e-22,64;UBERON:0003075,3.60e-22,64;UBERON:0007284,3.60e-22,64;UBERON:0003056,8.65e-22,49;UBERON:0003528,1.46e-21,29;UBERON:0002791,1.46e-21,29;UBERON:0001893,1.46e-21,29;UBERON:0010314,1.77e-21,92;UBERON:0010371,1.09e-17,73;UBERON:0004121,2.27e-17,95;UBERON:0000924,2.27e-17,95;UBERON:0006601,2.27e-17,95;UBERON:0000956,8.65e-16,21;UBERON:0001869,8.65e-16,21;UBERON:0000203,8.65e-16,21;UBERON:0000025,3.32e-14,114;UBERON:0004111,3.16e-12,122;UBERON:0002619,6.69e-12,17;UBERON:0002021,6.48e-11,10;UBERON:0000411,6.48e-11,10;UBERON:0001950,6.48e-11,10;UBERON:0000369,2.22e-07,5;UBERON:0002435,2.22e-07,5;UBERON:0000204,2.22e-07,5;UBERON:0010082,2.22e-07,5;UBERON:0002420,6.39e-07,8;UBERON:0007245,6.39e-07,8;UBERON:0010009,6.39e-07,8;UBERON:0010011,6.39e-07,8;UBERON:0000454,6.39e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,9.91350658212029,10.0508286061686,5.07065122804943,0,0,0,0,0,0.299600110518405,1.15265491596466,6.32506635081714,5.8052553482627,5.25812403378455,1.99955689082663,2.20868540951614,13.5964787128599,13.0349840584801,9.19218786610021,1.10115880999389,1.0214987046815,1.22885226604995,22.1568963386726,20.767695097747,24.4829284161677,0.837548997004143,1.68828783009504,1.22238598221448,3.24091444021034,2.84743361598206,4.47358669980721,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0.304465478312141,0.230615497256059,0.60289056221049,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0,0,0,4.09893115816166,1.04723353406728,0,0,0,0,2.69623150928681,4.57500602818627,22.7434377324285,3.12883776346098,4.60287823194595,2.0778804455956,2.92034273521964,0.101839363850316,0,0,0,0.130120442962704,0,0,0.150704817835715,0.272145996605311,1.0249097622788,0.749613796477831,0.258703370739016,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,3.52113813310353,5.8631514995274,3.42117916775928,3.07768156260773,4.9191057936851,4.16521204795921,3.48800917125612,2.14618721119695,1.40118410840603,2.79751744852917,0.985004784474571,0.162137619091711,0.146199987425332,0.219550115291051,0.402619256281115,0.420579897128254,6.79170441703277,0,0,0,0.696710015581316,0,0.201683524623343,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0.407302655690628,0,0,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0,0.339490171550376,0,0.670025029767263,1.42826184531608,0,0.315270288212382,0,0.318909537314974,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,0.481651769963376,0.820481806145422,0,0,0,0,0,0,0.222798674082394,0,0,0,0,3.21321316421807,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,10.5536277783674,0.540183282093931,1.4229455216103,1.28602221018955,1.24138163549592,1.78368817602071,3.9491764944509,2.13125464380219,0,0,0,0,0,0,0,0,0.582961673259701,0.370850604021019,0,0.619160603889667,0,0,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,11.2950368523413,8.74617949363636,10.8850147553485,7.90524638780963,4.11049511862385,6.0431511791176,3.37511250115903,4.05289082901798,1.35942722695261,3.10656187051092,0,0.399024873401031,0.853668028770671,0.729320151204882,1.67690530102386,1.83843508450014,2.00022055021454,1.64828045791115,1.60459604795908,2.77966932940177,1.52087579934144,2.64076877940507,1.68554713445788,1.40855335290712,2.64203157195821,1.42888107384922,2.0859178670074,1.92909220463705,1.23625770240992,2.35518272215036,1.02860775715625,1.24233064311536,0.953744759789284,1.0174249164263,2.25862512996793,1.26921911837515,2.56099162021882,1.57841826862706,0.679020569229309,1.68342681497322,0.830445126869219,1.47756723563345,0.818462086339379,1.39443157067369,0.578719832943424,5.24602213669686,1.87145286756327,1.71896843238639,0,0.220591419119515,0|short_description=p1@1500035N22Rik}} | ||
|EntrezGene=70258 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=Q9DB06 | |||
|association_with_transcript=0bp_to_ENSMUST00000075081,uc008wsp.1_5end | |||
|description=CAGE_peak_1_at_1500035N22Rik_5end | |||
|id=chr5:24491658..24491680,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.32e-14!23;CL:0000337!1.32e-14!23;CL:0000540!1.36e-07!33;CL:0000047!1.36e-07!33;CL:0000031!1.36e-07!33;CL:0000404!1.36e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.58e-19,23;CL:0000337,1.58e-19,23;CL:0000540,2.23e-11,33;CL:0000047,2.23e-11,33;CL:0000031,2.23e-11,33;CL:0000404,2.23e-11,33;CL:0000393,1.38e-08,39;CL:0000211,1.38e-08,39;CL:0002609,4.13e-08,6;CL:0002319,7.00e-08,43;CL:0000221,1.49e-07,44;CL:0000133,1.49e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.90e-27!52;UBERON:0005068!2.90e-27!52;UBERON:0006241!2.90e-27!52;UBERON:0007135!2.90e-27!52;UBERON:0000955!1.08e-25!50;UBERON:0006238!1.08e-25!50;UBERON:0002616!4.91e-25!49;UBERON:0003080!1.27e-23!40;UBERON:0001017!2.64e-23!73;UBERON:0005743!2.64e-23!73;UBERON:0002780!4.84e-23!39;UBERON:0001890!4.84e-23!39;UBERON:0006240!4.84e-23!39;UBERON:0002346!3.01e-22!71;UBERON:0003075!3.01e-22!71;UBERON:0007284!3.01e-22!71;UBERON:0000073!6.16e-22!75;UBERON:0001016!6.16e-22!75;UBERON:0002020!2.53e-21!34;UBERON:0000033!5.31e-21!63;UBERON:0003056!8.86e-21!49;UBERON:0002791!1.96e-18!29;UBERON:0003528!1.96e-18!29;UBERON:0001893!1.96e-18!29;UBERON:0004121!3.25e-16!102;UBERON:0000924!3.25e-16!102;UBERON:0006601!3.25e-16!102;UBERON:0000025!1.58e-15!114;UBERON:0000956!1.52e-13!21;UBERON:0001869!1.52e-13!21;UBERON:0000203!1.52e-13!21;UBERON:0004111!4.70e-13!122;UBERON:0002619!7.70e-11!17;UBERON:0007811!1.19e-10!86;UBERON:0000153!8.57e-09!94;UBERON:0002021!7.83e-08!10;UBERON:0000411!7.83e-08!10;UBERON:0001950!7.83e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.10e-31,54;UBERON:0001049,2.44e-29,52;UBERON:0005068,2.44e-29,52;UBERON:0006241,2.44e-29,52;UBERON:0007135,2.44e-29,52;UBERON:0003080,4.41e-28,40;UBERON:0002780,3.12e-27,39;UBERON:0001890,3.12e-27,39;UBERON:0006240,3.12e-27,39;UBERON:0000955,9.78e-27,47;UBERON:0006238,9.78e-27,47;UBERON:0001017,1.93e-26,73;UBERON:0002616,7.93e-26,46;UBERON:0002020,8.23e-26,34;UBERON:0001016,2.69e-25,75;UBERON:0002346,3.60e-22,64;UBERON:0003075,3.60e-22,64;UBERON:0007284,3.60e-22,64;UBERON:0003056,8.65e-22,49;UBERON:0003528,1.46e-21,29;UBERON:0002791,1.46e-21,29;UBERON:0001893,1.46e-21,29;UBERON:0010314,1.77e-21,92;UBERON:0010371,1.09e-17,73;UBERON:0004121,2.27e-17,95;UBERON:0000924,2.27e-17,95;UBERON:0006601,2.27e-17,95;UBERON:0000956,8.65e-16,21;UBERON:0001869,8.65e-16,21;UBERON:0000203,8.65e-16,21;UBERON:0000025,3.32e-14,114;UBERON:0004111,3.16e-12,122;UBERON:0002619,6.69e-12,17;UBERON:0002021,6.48e-11,10;UBERON:0000411,6.48e-11,10;UBERON:0001950,6.48e-11,10;UBERON:0000369,2.22e-07,5;UBERON:0002435,2.22e-07,5;UBERON:0000204,2.22e-07,5;UBERON:0010082,2.22e-07,5;UBERON:0002420,6.39e-07,8;UBERON:0007245,6.39e-07,8;UBERON:0010009,6.39e-07,8;UBERON:0010011,6.39e-07,8;UBERON:0000454,6.39e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,9.91350658212029,10.0508286061686,5.07065122804943,0,0,0,0,0,0.299600110518405,1.15265491596466,6.32506635081714,5.8052553482627,5.25812403378455,1.99955689082663,2.20868540951614,13.5964787128599,13.0349840584801,9.19218786610021,1.10115880999389,1.0214987046815,1.22885226604995,22.1568963386726,20.767695097747,24.4829284161677,0.837548997004143,1.68828783009504,1.22238598221448,3.24091444021034,2.84743361598206,4.47358669980721,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0.304465478312141,0.230615497256059,0.60289056221049,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0,0,0,4.09893115816166,1.04723353406728,0,0,0,0,2.69623150928681,4.57500602818627,22.7434377324285,3.12883776346098,4.60287823194595,2.0778804455956,2.92034273521964,0.101839363850316,0,0,0,0.130120442962704,0,0,0.150704817835715,0.272145996605311,1.0249097622788,0.749613796477831,0.258703370739016,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,3.52113813310353,5.8631514995274,3.42117916775928,3.07768156260773,4.9191057936851,4.16521204795921,3.48800917125612,2.14618721119695,1.40118410840603,2.79751744852917,0.985004784474571,0.162137619091711,0.146199987425332,0.219550115291051,0.402619256281115,0.420579897128254,6.79170441703277,0,0,0,0.696710015581316,0,0.201683524623343,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0.407302655690628,0,0,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0,0.339490171550376,0,0.670025029767263,1.42826184531608,0,0.315270288212382,0,0.318909537314974,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,0.481651769963376,0.820481806145422,0,0,0,0,0,0,0.222798674082394,0,0,0,0,3.21321316421807,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,10.5536277783674,0.540183282093931,1.4229455216103,1.28602221018955,1.24138163549592,1.78368817602071,3.9491764944509,2.13125464380219,0,0,0,0,0,0,0,0,0.582961673259701,0.370850604021019,0,0.619160603889667,0,0,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,11.2950368523413,8.74617949363636,10.8850147553485,7.90524638780963,4.11049511862385,6.0431511791176,3.37511250115903,4.05289082901798,1.35942722695261,3.10656187051092,0,0.399024873401031,0.853668028770671,0.729320151204882,1.67690530102386,1.83843508450014,2.00022055021454,1.64828045791115,1.60459604795908,2.77966932940177,1.52087579934144,2.64076877940507,1.68554713445788,1.40855335290712,2.64203157195821,1.42888107384922,2.0859178670074,1.92909220463705,1.23625770240992,2.35518272215036,1.02860775715625,1.24233064311536,0.953744759789284,1.0174249164263,2.25862512996793,1.26921911837515,2.56099162021882,1.57841826862706,0.679020569229309,1.68342681497322,0.830445126869219,1.47756723563345,0.818462086339379,1.39443157067369,0.578719832943424,5.24602213669686,1.87145286756327,1.71896843238639,0,0.220591419119515,0 | |||
|short_description=p1@1500035N22Rik | |||
}} |
Revision as of 07:18, 14 September 2013
Short description: | p1@1500035N22Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_1500035N22Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000075081, uc008wsp.1_5end |
EntrezGene: | 1500035N22Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.58e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.58e-19 | 23 |
neuron | 2.23e-11 | 33 |
neuronal stem cell | 2.23e-11 | 33 |
neuroblast | 2.23e-11 | 33 |
electrically signaling cell | 2.23e-11 | 33 |
electrically responsive cell | 1.38e-08 | 39 |
electrically active cell | 1.38e-08 | 39 |
neuron of cerebral cortex | 4.13e-08 | 6 |
neural cell | 7.00e-08 | 43 |
ectodermal cell | 1.49e-07 | 44 |
neurectodermal cell | 1.49e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.