FFCP PHASE1:Mm9::chr6:30756395..30756409,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=145|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:30756395..30756409,+|id=chr6:30756395..30756409,+|ontology_enrichment_celltype=CL:0000117!4.46e-09!23;CL:0000337!4.46e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.05e-10,23;CL:0000337,1.05e-10,23;CL:0002610,5.41e-09,3;CL:0002613,1.02e-08,3;CL:0000540,6.66e-07,33;CL:0000047,6.66e-07,33;CL:0000031,6.66e-07,33;CL:0000404,6.66e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!9.93e-15!34;UBERON:0001049!2.93e-14!52;UBERON:0005068!2.93e-14!52;UBERON:0006241!2.93e-14!52;UBERON:0007135!2.93e-14!52;UBERON:0002346!3.49e-13!71;UBERON:0003075!3.49e-13!71;UBERON:0007284!3.49e-13!71;UBERON:0000955!4.77e-13!50;UBERON:0006238!4.77e-13!50;UBERON:0002616!1.56e-12!49;UBERON:0000033!1.83e-12!63;UBERON:0001017!2.14e-12!73;UBERON:0005743!2.14e-12!73;UBERON:0000073!1.33e-11!75;UBERON:0001016!1.33e-11!75;UBERON:0002791!2.08e-11!29;UBERON:0003528!2.08e-11!29;UBERON:0001893!2.08e-11!29;UBERON:0003056!3.65e-11!49;UBERON:0002021!4.62e-10!10;UBERON:0000411!4.62e-10!10;UBERON:0001950!4.62e-10!10;UBERON:0003080!7.11e-10!40;UBERON:0000025!1.21e-09!114;UBERON:0002780!2.01e-09!39;UBERON:0001890!2.01e-09!39;UBERON:0006240!2.01e-09!39;UBERON:0004121!2.33e-09!102;UBERON:0000924!2.33e-09!102;UBERON:0006601!2.33e-09!102;UBERON:0002619!4.32e-08!17;UBERON:0000956!9.57e-08!21;UBERON:0001869!9.57e-08!21;UBERON:0000203!9.57e-08!21;UBERON:0004111!9.92e-08!122|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.76e-29,10;UBERON:0000411,2.76e-29,10;UBERON:0001950,2.76e-29,10;UBERON:0000073,1.15e-28,54;UBERON:0002020,1.31e-27,34;UBERON:0003528,9.53e-26,29;UBERON:0002791,9.53e-26,29;UBERON:0001893,9.53e-26,29;UBERON:0001049,7.31e-25,52;UBERON:0005068,7.31e-25,52;UBERON:0006241,7.31e-25,52;UBERON:0007135,7.31e-25,52;UBERON:0001017,1.13e-23,73;UBERON:0001016,6.76e-23,75;UBERON:0002780,8.89e-23,39;UBERON:0001890,8.89e-23,39;UBERON:0006240,8.89e-23,39;UBERON:0003080,4.20e-22,40;UBERON:0002616,7.79e-21,46;UBERON:0000955,2.68e-20,47;UBERON:0006238,2.68e-20,47;UBERON:0002346,2.81e-19,64;UBERON:0003075,2.81e-19,64;UBERON:0007284,2.81e-19,64;UBERON:0003056,2.82e-17,49;UBERON:0004121,6.32e-17,95;UBERON:0000924,6.32e-17,95;UBERON:0006601,6.32e-17,95;UBERON:0002619,2.12e-16,17;UBERON:0010371,2.71e-16,73;UBERON:0000956,2.23e-15,21;UBERON:0001869,2.23e-15,21;UBERON:0000203,2.23e-15,21;UBERON:0000369,1.57e-13,5;UBERON:0002435,1.57e-13,5;UBERON:0000204,1.57e-13,5;UBERON:0010082,1.57e-13,5;UBERON:0010314,3.13e-13,92;UBERON:0002420,5.06e-12,8;UBERON:0007245,5.06e-12,8;UBERON:0010009,5.06e-12,8;UBERON:0010011,5.06e-12,8;UBERON:0000454,5.06e-12,8;UBERON:0000025,5.47e-12,114;UBERON:0004111,7.58e-11,122;UBERON:0004684,5.41e-09,3;UBERON:0002275,5.41e-09,3;UBERON:0011216,6.17e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0.622137673850866,0,0,0.571301968807607,0.662605622854841,0.244981598429908,0.287536413054709,0,1.10115880999389,2.42605942361857,3.84016333140609,1.97829431595291,1.28082701043374,1.56274011167028,0.279182999001381,0,3.97275444219706,9.72274332063103,6.12198227436143,0.745597783301202,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0.485300549842228,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.599162557619291,1.37250180845588,2.01046963380583,1.04294592115366,1.27857728665165,1.0389402227978,1.1356888414743,0.101839363850316,0,0,0.420883711772948,0,0,0.180062129805349,0.60281927134286,0.272145996605311,0.384341160854549,0.281105173679186,0.517406741478031,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617068451549513,0.465067889500816,0.268273401399619,0.350296027101508,0.16455984991348,1.97000956894914,0.324275238183423,0.146199987425332,0.219550115291051,0,0.420579897128254,0.92614151141356,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0.775809948670503,0.350679099451593,0.252946148497029,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0.648540907100142,0.274561413188081,2.87536413054709,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0.469380496577004,0.335012514883631,0,1.95133647857799,0.945810864637146,0.8858587585951,0.797273843287435,0.655453258862952,0.172684981865896,0.144649058581512,0,0,0,0,0.642202359951168,1.28932855251423,0,0,0,0,0.430846795465598,0,0,0,0,0,0,0.642642632843614,0,0,0.488660878060728,0,0,0,0,0.377210159511796,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0.161464426695906,0.120625849856312,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.539457385539283,0.661227645802687,0,0,0,0,0,0.165458490457098,0,0,0.675824501963113,0.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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=145 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:30756395..30756409,+ | |||
|id=chr6:30756395..30756409,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.46e-09!23;CL:0000337!4.46e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.05e-10,23;CL:0000337,1.05e-10,23;CL:0002610,5.41e-09,3;CL:0002613,1.02e-08,3;CL:0000540,6.66e-07,33;CL:0000047,6.66e-07,33;CL:0000031,6.66e-07,33;CL:0000404,6.66e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!9.93e-15!34;UBERON:0001049!2.93e-14!52;UBERON:0005068!2.93e-14!52;UBERON:0006241!2.93e-14!52;UBERON:0007135!2.93e-14!52;UBERON:0002346!3.49e-13!71;UBERON:0003075!3.49e-13!71;UBERON:0007284!3.49e-13!71;UBERON:0000955!4.77e-13!50;UBERON:0006238!4.77e-13!50;UBERON:0002616!1.56e-12!49;UBERON:0000033!1.83e-12!63;UBERON:0001017!2.14e-12!73;UBERON:0005743!2.14e-12!73;UBERON:0000073!1.33e-11!75;UBERON:0001016!1.33e-11!75;UBERON:0002791!2.08e-11!29;UBERON:0003528!2.08e-11!29;UBERON:0001893!2.08e-11!29;UBERON:0003056!3.65e-11!49;UBERON:0002021!4.62e-10!10;UBERON:0000411!4.62e-10!10;UBERON:0001950!4.62e-10!10;UBERON:0003080!7.11e-10!40;UBERON:0000025!1.21e-09!114;UBERON:0002780!2.01e-09!39;UBERON:0001890!2.01e-09!39;UBERON:0006240!2.01e-09!39;UBERON:0004121!2.33e-09!102;UBERON:0000924!2.33e-09!102;UBERON:0006601!2.33e-09!102;UBERON:0002619!4.32e-08!17;UBERON:0000956!9.57e-08!21;UBERON:0001869!9.57e-08!21;UBERON:0000203!9.57e-08!21;UBERON:0004111!9.92e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.76e-29,10;UBERON:0000411,2.76e-29,10;UBERON:0001950,2.76e-29,10;UBERON:0000073,1.15e-28,54;UBERON:0002020,1.31e-27,34;UBERON:0003528,9.53e-26,29;UBERON:0002791,9.53e-26,29;UBERON:0001893,9.53e-26,29;UBERON:0001049,7.31e-25,52;UBERON:0005068,7.31e-25,52;UBERON:0006241,7.31e-25,52;UBERON:0007135,7.31e-25,52;UBERON:0001017,1.13e-23,73;UBERON:0001016,6.76e-23,75;UBERON:0002780,8.89e-23,39;UBERON:0001890,8.89e-23,39;UBERON:0006240,8.89e-23,39;UBERON:0003080,4.20e-22,40;UBERON:0002616,7.79e-21,46;UBERON:0000955,2.68e-20,47;UBERON:0006238,2.68e-20,47;UBERON:0002346,2.81e-19,64;UBERON:0003075,2.81e-19,64;UBERON:0007284,2.81e-19,64;UBERON:0003056,2.82e-17,49;UBERON:0004121,6.32e-17,95;UBERON:0000924,6.32e-17,95;UBERON:0006601,6.32e-17,95;UBERON:0002619,2.12e-16,17;UBERON:0010371,2.71e-16,73;UBERON:0000956,2.23e-15,21;UBERON:0001869,2.23e-15,21;UBERON:0000203,2.23e-15,21;UBERON:0000369,1.57e-13,5;UBERON:0002435,1.57e-13,5;UBERON:0000204,1.57e-13,5;UBERON:0010082,1.57e-13,5;UBERON:0010314,3.13e-13,92;UBERON:0002420,5.06e-12,8;UBERON:0007245,5.06e-12,8;UBERON:0010009,5.06e-12,8;UBERON:0010011,5.06e-12,8;UBERON:0000454,5.06e-12,8;UBERON:0000025,5.47e-12,114;UBERON:0004111,7.58e-11,122;UBERON:0004684,5.41e-09,3;UBERON:0002275,5.41e-09,3;UBERON:0011216,6.17e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0.622137673850866,0,0,0.571301968807607,0.662605622854841,0.244981598429908,0.287536413054709,0,1.10115880999389,2.42605942361857,3.84016333140609,1.97829431595291,1.28082701043374,1.56274011167028,0.279182999001381,0,3.97275444219706,9.72274332063103,6.12198227436143,0.745597783301202,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0.485300549842228,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.599162557619291,1.37250180845588,2.01046963380583,1.04294592115366,1.27857728665165,1.0389402227978,1.1356888414743,0.101839363850316,0,0,0.420883711772948,0,0,0.180062129805349,0.60281927134286,0.272145996605311,0.384341160854549,0.281105173679186,0.517406741478031,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617068451549513,0.465067889500816,0.268273401399619,0.350296027101508,0.16455984991348,1.97000956894914,0.324275238183423,0.146199987425332,0.219550115291051,0,0.420579897128254,0.92614151141356,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0.775809948670503,0.350679099451593,0.252946148497029,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0.648540907100142,0.274561413188081,2.87536413054709,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0.469380496577004,0.335012514883631,0,1.95133647857799,0.945810864637146,0.8858587585951,0.797273843287435,0.655453258862952,0.172684981865896,0.144649058581512,0,0,0,0,0.642202359951168,1.28932855251423,0,0,0,0,0.430846795465598,0,0,0,0,0,0,0.642642632843614,0,0,0.488660878060728,0,0,0,0,0.377210159511796,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0.161464426695906,0.120625849856312,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.539457385539283,0.661227645802687,0,0,0,0,0,0.165458490457098,0,0,0.675824501963113,0.352071715937262,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0,0.295379054349154,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,9.60078132449013,4.60325236507177,8.59343270159095,5.32744865265431,2.74033007908257,4.5323633843382,3.37511250115903,2.70192721934532,4.53142408984205,4.65984280576638,0,0.399024873401031,0.170733605754134,0.243106717068294,0.628839487883947,0.367687016900028,0.44449345560323,0.206035057238894,0,0.505394423527595,0.25347929989024,0.188626341386076,0.37456602987953,0.256100609619477,0.114870937911227,0,0.347652977834566,0.192909220463705,0,0.735994600671987,0.342869252385415,1.06485483695602,0.953744759789284,0.145346416632329,0.0941093804153306,0.338458431566706,0.73171189149109,0.789209134313529,0.271608227691724,0.561142271657738,0.355905054372522,0.492522411877817,0.818462086339379,0,0.192906610981141,0.499621155875892,0.701794825336225,0.429742108096597,0.382576664137687,0,0.231867835620421 | |||
|short_description=p@chr6:30756395..30756409,+ | |||
}} |
Revision as of 09:38, 14 September 2013
Short description: | p@chr6:30756395..30756409, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:30756395..30756409, + |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.05e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.05e-10 | 23 |
raphe nuclei neuron | 5.41e-09 | 3 |
striatum neuron | 1.02e-08 | 3 |
neuron | 6.66e-07 | 33 |
neuronal stem cell | 6.66e-07 | 33 |
neuroblast | 6.66e-07 | 33 |
electrically signaling cell | 6.66e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.