FFCP PHASE1:Mm9::chr6:87482970..87482992,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=232201|HGNC=|MCL_coexpression_id=36|UniProt=Q8BYW1|association_with_transcript=236bp_to_ENSMUST00000113637,NM_001037727,uc009ctm.1,uc009ctn.1_5end|description=CAGE_peak_3_at_Arhgap25_5end|id=chr6:87482970..87482992,-|ontology_enrichment_celltype=CL:0002031!3.68e-09!25;CL:0000988!3.87e-09!32;CL:0002032!3.87e-09!32;CL:0000037!3.87e-09!32;CL:0000566!3.87e-09!32;CL:0000837!3.87e-09!32;CL:0000738!1.18e-08!17;CL:0002087!1.18e-08!17;CL:0000838!1.49e-07!12;CL:0000542!5.84e-07!13;CL:0000051!5.84e-07!13;CL:0000084!6.27e-07!11;CL:0000827!6.27e-07!11|ontology_enrichment_celltype_v019_2=CL:0000988,1.22e-14,32;CL:0002032,1.22e-14,32;CL:0000037,1.22e-14,32;CL:0000837,1.22e-14,32;CL:0002031,1.50e-14,25;CL:0000738,6.92e-12,17;CL:0002087,6.92e-12,17;CL:0000838,1.70e-10,12;CL:0002320,1.87e-10,46;CL:0000134,1.87e-10,46;CL:0000084,1.43e-09,11;CL:0000827,1.43e-09,11;CL:0000542,2.26e-09,13;CL:0000051,2.26e-09,13;CL:0000791,2.96e-09,9;CL:0000789,2.96e-09,9;CL:0002420,2.96e-09,9;CL:0002419,2.96e-09,9;CL:0000790,2.96e-09,9;CL:0000624,1.67e-08,8;CL:0000219,1.57e-07,54;CL:0000049,6.87e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.13e-18!48;UBERON:0002390!9.88e-17!45;UBERON:0003061!9.88e-17!45;UBERON:0002405!1.45e-15!70;UBERON:0004177!1.59e-10!29;UBERON:0005057!1.85e-08!51;UBERON:0003408!2.88e-08!24;UBERON:0003081!3.50e-08!88;UBERON:0002370!4.48e-08!23;UBERON:0000974!4.48e-08!23;UBERON:0004807!4.48e-08!23;UBERON:0005058!4.48e-08!23;UBERON:0003351!4.48e-08!23;UBERON:0009113!4.48e-08!23;UBERON:0003295!4.48e-08!23;UBERON:0009722!4.48e-08!23;UBERON:0005562!4.48e-08!23;UBERON:0007690!4.48e-08!23;UBERON:0006562!6.15e-08!24;UBERON:0001557!6.15e-08!24;UBERON:0001042!6.15e-08!24;UBERON:0008814!6.15e-08!24;UBERON:0009145!6.15e-08!24;UBERON:0002371!4.24e-07!16;UBERON:0001474!9.22e-07!22;UBERON:0004765!9.22e-07!22;UBERON:0001434!9.22e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.87e-28,48;UBERON:0002405,4.87e-28,48;UBERON:0002390,5.95e-26,45;UBERON:0003061,5.95e-26,45;UBERON:0004177,5.02e-16,29;UBERON:0005057,5.02e-16,29;UBERON:0003408,1.30e-12,24;UBERON:0000077,1.44e-12,35;UBERON:0002370,2.48e-12,23;UBERON:0000974,2.48e-12,23;UBERON:0004807,2.48e-12,23;UBERON:0005058,2.48e-12,23;UBERON:0003351,2.48e-12,23;UBERON:0009113,2.48e-12,23;UBERON:0003295,2.48e-12,23;UBERON:0009722,2.48e-12,23;UBERON:0005562,2.48e-12,23;UBERON:0007690,2.48e-12,23;UBERON:0006562,1.58e-11,24;UBERON:0001557,1.58e-11,24;UBERON:0001042,1.58e-11,24;UBERON:0008814,1.58e-11,24;UBERON:0009145,1.58e-11,24;UBERON:0003081,3.22e-11,87;UBERON:0001474,8.35e-11,22;UBERON:0004765,8.35e-11,22;UBERON:0001434,8.35e-11,22;UBERON:0002384,1.87e-10,46;UBERON:0002371,2.12e-10,16;UBERON:0001004,1.64e-09,42;UBERON:0000072,1.71e-09,27;UBERON:0000065,3.27e-09,41;UBERON:0002204,7.10e-09,32;UBERON:0001041,1.47e-08,80;UBERON:0002021,1.09e-07,10;UBERON:0000411,1.09e-07,10;UBERON:0001950,1.09e-07,10;UBERON:0000926,2.06e-07,120;UBERON:0004120,2.06e-07,120;UBERON:0006603,2.06e-07,120|phase1_expression=0,0,0,0,0,0,0,15.6239221364307,26.8906459309683,31.8327755797911,6.67750076079469,3.58974715479014,12.6688540149092,18.0960233007325,4.99664642723494,4.25198061518635,3.49780939064073,18.612267756136,19.1960207048034,14.8536378129311,1.7008658030214,1.19149141441062,1.30599894569468,1.43993180514066,3.21172993494038,0,0,0,0.190023419456374,0.504060259519861,0.443461021310609,0,0,0,0,0,0,28.4601508901097,8.5946887897618,23.5585684788209,21.7645650571475,23.9065919735456,16.0218416500281,0,0,0,0,0.218025156380447,0,0,0,0,13.9259563027921,13.7818806982155,9.07453257684653,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0,0,0,11.6986963246582,7.9109309005358,9.2362414942993,2.99600110518405,1.53687322128622,0,0.135005938331691,0,0,0,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0.558365998002762,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.151452386666368,0,0,0,0,0,0.649776417447669,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,1.1418387971906,43.5015644527248,2.07818994690755,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.823120949949934,0.251333182659351,0.247194967734374,1.15679485535929,4.42305275974937,1.13236794963186,5.07935492458905,7.27312879702833,0,0,0.209446706813455,1.02182822083437,2.15667224110656,1.79970819298022,1.01656181658452,0.299581278809645,0.915001205637253,0.376963056338593,6.25767552692195,6.13717097592793,0.20778804455956,1.1356888414743,0.203678727700633,3.85661608891288,0.252722758433675,0.631325567659422,0,0,0,0.150704817835715,0,0,0.187403449119458,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,2.05878325691772,1.42081749697796,0,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0.536546802799238,0.350296027101508,0.16455984991348,0.492502392237286,0.648550476366846,0.730999937126662,1.3173006917463,0.805238512562231,1.89260953707715,0.308713837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| ||
|EntrezGene=232201 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt=Q8BYW1 | |||
|association_with_transcript=236bp_to_ENSMUST00000113637,NM_001037727,uc009ctm.1,uc009ctn.1_5end | |||
|description=CAGE_peak_3_at_Arhgap25_5end | |||
|id=chr6:87482970..87482992,- | |||
|ontology_enrichment_celltype=CL:0002031!3.68e-09!25;CL:0000988!3.87e-09!32;CL:0002032!3.87e-09!32;CL:0000037!3.87e-09!32;CL:0000566!3.87e-09!32;CL:0000837!3.87e-09!32;CL:0000738!1.18e-08!17;CL:0002087!1.18e-08!17;CL:0000838!1.49e-07!12;CL:0000542!5.84e-07!13;CL:0000051!5.84e-07!13;CL:0000084!6.27e-07!11;CL:0000827!6.27e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.22e-14,32;CL:0002032,1.22e-14,32;CL:0000037,1.22e-14,32;CL:0000837,1.22e-14,32;CL:0002031,1.50e-14,25;CL:0000738,6.92e-12,17;CL:0002087,6.92e-12,17;CL:0000838,1.70e-10,12;CL:0002320,1.87e-10,46;CL:0000134,1.87e-10,46;CL:0000084,1.43e-09,11;CL:0000827,1.43e-09,11;CL:0000542,2.26e-09,13;CL:0000051,2.26e-09,13;CL:0000791,2.96e-09,9;CL:0000789,2.96e-09,9;CL:0002420,2.96e-09,9;CL:0002419,2.96e-09,9;CL:0000790,2.96e-09,9;CL:0000624,1.67e-08,8;CL:0000219,1.57e-07,54;CL:0000049,6.87e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.13e-18!48;UBERON:0002390!9.88e-17!45;UBERON:0003061!9.88e-17!45;UBERON:0002405!1.45e-15!70;UBERON:0004177!1.59e-10!29;UBERON:0005057!1.85e-08!51;UBERON:0003408!2.88e-08!24;UBERON:0003081!3.50e-08!88;UBERON:0002370!4.48e-08!23;UBERON:0000974!4.48e-08!23;UBERON:0004807!4.48e-08!23;UBERON:0005058!4.48e-08!23;UBERON:0003351!4.48e-08!23;UBERON:0009113!4.48e-08!23;UBERON:0003295!4.48e-08!23;UBERON:0009722!4.48e-08!23;UBERON:0005562!4.48e-08!23;UBERON:0007690!4.48e-08!23;UBERON:0006562!6.15e-08!24;UBERON:0001557!6.15e-08!24;UBERON:0001042!6.15e-08!24;UBERON:0008814!6.15e-08!24;UBERON:0009145!6.15e-08!24;UBERON:0002371!4.24e-07!16;UBERON:0001474!9.22e-07!22;UBERON:0004765!9.22e-07!22;UBERON:0001434!9.22e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.87e-28,48;UBERON:0002405,4.87e-28,48;UBERON:0002390,5.95e-26,45;UBERON:0003061,5.95e-26,45;UBERON:0004177,5.02e-16,29;UBERON:0005057,5.02e-16,29;UBERON:0003408,1.30e-12,24;UBERON:0000077,1.44e-12,35;UBERON:0002370,2.48e-12,23;UBERON:0000974,2.48e-12,23;UBERON:0004807,2.48e-12,23;UBERON:0005058,2.48e-12,23;UBERON:0003351,2.48e-12,23;UBERON:0009113,2.48e-12,23;UBERON:0003295,2.48e-12,23;UBERON:0009722,2.48e-12,23;UBERON:0005562,2.48e-12,23;UBERON:0007690,2.48e-12,23;UBERON:0006562,1.58e-11,24;UBERON:0001557,1.58e-11,24;UBERON:0001042,1.58e-11,24;UBERON:0008814,1.58e-11,24;UBERON:0009145,1.58e-11,24;UBERON:0003081,3.22e-11,87;UBERON:0001474,8.35e-11,22;UBERON:0004765,8.35e-11,22;UBERON:0001434,8.35e-11,22;UBERON:0002384,1.87e-10,46;UBERON:0002371,2.12e-10,16;UBERON:0001004,1.64e-09,42;UBERON:0000072,1.71e-09,27;UBERON:0000065,3.27e-09,41;UBERON:0002204,7.10e-09,32;UBERON:0001041,1.47e-08,80;UBERON:0002021,1.09e-07,10;UBERON:0000411,1.09e-07,10;UBERON:0001950,1.09e-07,10;UBERON:0000926,2.06e-07,120;UBERON:0004120,2.06e-07,120;UBERON:0006603,2.06e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,15.6239221364307,26.8906459309683,31.8327755797911,6.67750076079469,3.58974715479014,12.6688540149092,18.0960233007325,4.99664642723494,4.25198061518635,3.49780939064073,18.612267756136,19.1960207048034,14.8536378129311,1.7008658030214,1.19149141441062,1.30599894569468,1.43993180514066,3.21172993494038,0,0,0,0.190023419456374,0.504060259519861,0.443461021310609,0,0,0,0,0,0,28.4601508901097,8.5946887897618,23.5585684788209,21.7645650571475,23.9065919735456,16.0218416500281,0,0,0,0,0.218025156380447,0,0,0,0,13.9259563027921,13.7818806982155,9.07453257684653,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0,0,0,11.6986963246582,7.9109309005358,9.2362414942993,2.99600110518405,1.53687322128622,0,0.135005938331691,0,0,0,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0.558365998002762,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.151452386666368,0,0,0,0,0,0.649776417447669,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,1.1418387971906,43.5015644527248,2.07818994690755,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.823120949949934,0.251333182659351,0.247194967734374,1.15679485535929,4.42305275974937,1.13236794963186,5.07935492458905,7.27312879702833,0,0,0.209446706813455,1.02182822083437,2.15667224110656,1.79970819298022,1.01656181658452,0.299581278809645,0.915001205637253,0.376963056338593,6.25767552692195,6.13717097592793,0.20778804455956,1.1356888414743,0.203678727700633,3.85661608891288,0.252722758433675,0.631325567659422,0,0,0,0.150704817835715,0,0,0.187403449119458,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,2.05878325691772,1.42081749697796,0,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0.536546802799238,0.350296027101508,0.16455984991348,0.492502392237286,0.648550476366846,0.730999937126662,1.3173006917463,0.805238512562231,1.89260953707715,0.308713837137853,0.991256348951394,0.793351699990633,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0,0,0.994782360205754,0.38992817423824,0.898819408654221,0.648414149624083,0,0,0.228497025219458,0,0,0,0,0.316182685621286,0.147610147979602,0.627994911365499,0,1.1858105083486,0.166845105716094,0.786235980452812,0.674586337154561,0.202860121388503,0.241177159752417,1.01850340712568,2.5892652370573,5.0261920300261,2.19649130550465,2.87536413054709,2.97712758134803,0.936113019343682,0.252578877947112,1.25578189465339,0.482443521363367,4.98833613449833,0,0.162964976442026,0,0,0.167506257441816,0.476087281772027,0.585400943573396,2.20689201748667,2.21464689648775,1.91345722388985,2.94953966488328,4.83517949224508,3.18227928879325,13.5712155545345,11.4220193601929,1.47529281905711,0.551873492609465,0.80275294993896,0.468846746368813,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,1.27746076687442,0,0.488660878060728,0.659880491890142,0,0,0,0,0,0,0,0,0.356497378384721,1.58018378967908,0,0,0,0.18006109403131,0.517434735131018,0,0.354680467284547,0.356737635204141,0.493647061806363,0.608929898229199,0.23467170806371,0,0.661585194164886,1.31909002353184,0.322928853391811,0.241251699712623,1.07435109602823,0.492422699235184,0,0.556275906031529,9.91051108627546,1.03193433981611,2.77791791054568,6.59289599516419,9.29520748502971,8.23601423543482,2.37969801991397,3.63873776041511,3.17859939750175,1.90934123603023,0.316335993581135,0,0.216010681643603,0.418176592028937,0.436725127492355,0.134864346384821,0.826534557253359,1.04702376793612,0.518459893167171,1.24267862617385,0,0,0,0,0.387479470433193,0,0.234714477291508,0,0.209718688851422,0.241584120826006,0.288030006257865,12.324433704499,0.405450430580328,1.23253148597793,2.33857481360031,5.37080087002444,9.93406773906325,10.0964177596774,9.59981926634752,12.8227391434147,12.421709484765,10.9900541799156,10.9152826428523,12.3151157299622,21.7391038057718,0.453460767230423,0,0,0,0.579568782096571,0.750729901804728,0.915758121336325,1.07184189539533,0.501572104035363,5.64751842617067,3.22227665555024,3.43737308063638,4.29632955859219,8.22099023724771,3.7769694869485,5.40018000185445,6.75481804836331,7.70342095273148,5.1776031175182,0,0.798049746802062,0.341467211508268,0.729320151204882,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0.962757628775446,0.252697211763798,0.50695859978048,0.754505365544305,0.0936415074698824,0.256100609619477,0.34461281373368,0.476293691283074,0.347652977834566,0.192909220463705,0,0,0.342869252385415,0,0.476872379894642,0.290692833264657,0.564656282491984,0.507687647350059,0.182927972872773,0,0.407412341537585,0.561142271657738,0.474540072496697,0.197008964751127,0.409231043169689,0.154936841185966,0.578719832943424,0,0.701794825336225,0.644613162144895,1.14772999241306,0.220591419119515,2.08681052058379 | |||
|short_description=p3@Arhgap25 | |||
}} |
Revision as of 10:52, 14 September 2013
Short description: | p3@Arhgap25 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Arhgap25_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 236bp_to_ENSMUST00000113637, NM_001037727, uc009ctm.1, uc009ctn.1_5end |
EntrezGene: | Arhgap25 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.22e-14 | 32 |
hematopoietic oligopotent progenitor cell | 1.22e-14 | 32 |
hematopoietic stem cell | 1.22e-14 | 32 |
hematopoietic multipotent progenitor cell | 1.22e-14 | 32 |
hematopoietic lineage restricted progenitor cell | 1.50e-14 | 25 |
leukocyte | 6.92e-12 | 17 |
nongranular leukocyte | 6.92e-12 | 17 |
lymphoid lineage restricted progenitor cell | 1.70e-10 | 12 |
connective tissue cell | 1.87e-10 | 46 |
mesenchymal cell | 1.87e-10 | 46 |
T cell | 1.43e-09 | 11 |
pro-T cell | 1.43e-09 | 11 |
lymphocyte | 2.26e-09 | 13 |
common lymphoid progenitor | 2.26e-09 | 13 |
mature alpha-beta T cell | 2.96e-09 | 9 |
alpha-beta T cell | 2.96e-09 | 9 |
immature T cell | 2.96e-09 | 9 |
mature T cell | 2.96e-09 | 9 |
immature alpha-beta T cell | 2.96e-09 | 9 |
CD4-positive, alpha-beta T cell | 1.67e-08 | 8 |
motile cell | 1.57e-07 | 54 |
common myeloid progenitor | 6.87e-07 | 19 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.