FFCP PHASE1:Mm9::chr7:134094351..134094362,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=233878|HGNC=|MCL_coexpression_id=159|UniProt=Q4V9Z5|association_with_transcript=108bp_to_ENSMUST00000106333,uc009jtq.1,uc009jtr.1,uc012ftx.1_5end|description=CAGE_peak_8_at_Sez6l2_5end|id=chr7:134094351..134094362,+|ontology_enrichment_celltype=CL:0000117!8.20e-17!23;CL:0000337!8.20e-17!23;CL:0000540!6.87e-12!33;CL:0000047!6.87e-12!33;CL:0000031!6.87e-12!33;CL:0000404!6.87e-12!33;CL:0000393!2.58e-08!39;CL:0000211!2.58e-08!39;CL:0000221!2.77e-07!44;CL:0000133!2.77e-07!44;CL:0002319!3.77e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.11e-26,23;CL:0000337,2.11e-26,23;CL:0000540,8.24e-18,33;CL:0000047,8.24e-18,33;CL:0000031,8.24e-18,33;CL:0000404,8.24e-18,33;CL:0000393,5.60e-14,39;CL:0000211,5.60e-14,39;CL:0002319,4.89e-12,43;CL:0000221,1.31e-11,44;CL:0000133,1.31e-11,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.39e-34!71;UBERON:0003075!6.39e-34!71;UBERON:0007284!6.39e-34!71;UBERON:0001049!9.75e-28!52;UBERON:0005068!9.75e-28!52;UBERON:0006241!9.75e-28!52;UBERON:0007135!9.75e-28!52;UBERON:0000033!3.40e-27!63;UBERON:0001017!1.10e-25!73;UBERON:0005743!1.10e-25!73;UBERON:0004121!1.42e-25!102;UBERON:0000924!1.42e-25!102;UBERON:0006601!1.42e-25!102;UBERON:0000955!2.20e-25!50;UBERON:0006238!2.20e-25!50;UBERON:0000073!3.53e-25!75;UBERON:0001016!3.53e-25!75;UBERON:0002616!9.84e-25!49;UBERON:0003056!1.22e-24!49;UBERON:0003080!2.63e-21!40;UBERON:0002780!1.74e-20!39;UBERON:0001890!1.74e-20!39;UBERON:0006240!1.74e-20!39;UBERON:0002020!3.14e-19!34;UBERON:0002791!5.34e-15!29;UBERON:0003528!5.34e-15!29;UBERON:0001893!5.34e-15!29;UBERON:0007811!8.16e-14!86;UBERON:0000153!1.17e-11!94;UBERON:0000956!1.59e-09!21;UBERON:0001869!1.59e-09!21;UBERON:0000203!1.59e-09!21;UBERON:0002619!1.26e-07!17;UBERON:0002021!2.91e-07!10;UBERON:0000411!2.91e-07!10;UBERON:0001950!2.91e-07!10;UBERON:0002420!5.40e-07!8;UBERON:0007245!5.40e-07!8;UBERON:0010009!5.40e-07!8;UBERON:0010011!5.40e-07!8;UBERON:0000454!5.40e-07!8;UBERON:0003076!6.57e-07!12;UBERON:0003057!6.57e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.06e-46,54;UBERON:0001049,5.52e-44,52;UBERON:0005068,5.52e-44,52;UBERON:0006241,5.52e-44,52;UBERON:0007135,5.52e-44,52;UBERON:0001017,2.70e-42,73;UBERON:0002346,5.74e-42,64;UBERON:0003075,5.74e-42,64;UBERON:0007284,5.74e-42,64;UBERON:0001016,9.10e-41,75;UBERON:0000955,7.89e-36,47;UBERON:0006238,7.89e-36,47;UBERON:0010371,4.94e-35,73;UBERON:0002616,1.01e-34,46;UBERON:0004121,1.50e-34,95;UBERON:0000924,1.50e-34,95;UBERON:0006601,1.50e-34,95;UBERON:0003080,1.24e-31,40;UBERON:0002020,1.35e-30,34;UBERON:0003056,1.83e-30,49;UBERON:0002780,3.14e-30,39;UBERON:0001890,3.14e-30,39;UBERON:0006240,3.14e-30,39;UBERON:0010314,3.27e-26,92;UBERON:0003528,3.03e-23,29;UBERON:0002791,3.03e-23,29;UBERON:0001893,3.03e-23,29;UBERON:0000956,8.41e-14,21;UBERON:0001869,8.41e-14,21;UBERON:0000203,8.41e-14,21;UBERON:0000025,5.19e-13,114;UBERON:0003076,4.43e-12,12;UBERON:0003057,4.43e-12,12;UBERON:0002619,5.06e-12,17;UBERON:0002021,1.25e-11,10;UBERON:0000411,1.25e-11,10;UBERON:0001950,1.25e-11,10;UBERON:0004111,2.35e-11,122;UBERON:0002420,3.71e-11,8;UBERON:0007245,3.71e-11,8;UBERON:0010009,3.71e-11,8;UBERON:0010011,3.71e-11,8;UBERON:0000454,3.71e-11,8;UBERON:0002240,2.61e-10,6;UBERON:0005174,2.61e-10,6;UBERON:0001137,2.61e-10,6;UBERON:0001948,6.78e-09,5;UBERON:0002315,6.78e-09,5;UBERON:0001894,1.01e-07,10;UBERON:0006222,1.01e-07,10;UBERON:0002950,3.52e-07,4;UBERON:0001891,3.52e-07,4;UBERON:0009616,3.52e-07,4;UBERON:0010286,3.52e-07,4;UBERON:0000369,6.09e-07,5;UBERON:0002435,6.09e-07,5;UBERON:0000204,6.09e-07,5;UBERON:0010082,6.09e-07,5;UBERON:0011216,6.12e-07,194;UBERON:0000483,6.98e-07,174|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0.159992422793407,0.45881856213434,0,0,0.430942465371778,0.380046838912748,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85559506063035,4.7609188134483,3.1691570175309,0,0,0,0,0,0,0,0.933206510776299,1.21505344498522,1.26194976810829,11.7116903605559,13.2521124570968,1.10241719293459,1.62937300731002,1.83843757322004,4.40463523997555,6.2566795661742,5.9906547969935,2.90149833006426,4.20843160571084,2.6045668527838,10.0505879640497,7.87867654044352,9.47349136216223,13.258286346315,15.233769845504,9.13357284543973,0,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,1.63286352971307,0.520455980298408,0.304465478312141,0.691846491768175,0.452167921657868,0.823120949949934,0.502666365318702,0,0,0,0,0,0,0,3.80615036115011,3.77004072264219,0.255457055208591,0,0,0,7.63932260964596,4.11750542536764,2.76439574648302,4.51943232499919,2.81287003063364,4.1557608911912,2.59586020908412,0.101839363850316,0,0,0.631325567659422,0.260240885925407,0.689706313300419,0.900310649026746,1.20563854268572,1.36072998302656,1.0249097622788,1.40552586839593,0.517406741478031,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0.590292695242212,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.493679549740441,0.985004784474571,0.324275238183423,0.146199987425332,0.658650345873152,0,4.6263788684108,0.411618449517138,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0.407302655690628,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.90367536947505,5.15731421005694,0.163934945376675,0,0.94652465824877,0,1.29254038639679,0,0,0.283076530788832,0,0,0,1.92792789853084,0,0,0.162886959353576,0,0,0,0.302323556964751,0.377210159511796,0.885905678642318,0,0.516856586336442,0,0.356497378384721,0,1.05418608574999,0,9.19186935535228,0.36012218806262,1.03486947026204,0.428674070063185,1.95074257006501,2.49716344642899,3.29098041204242,7.30715877875038,0,0,0,0,0,0,0,0,0,9.27126510052548,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,1.14579102687879,1.3748254587495,1.37016503954128,1.5107877947794,6.07520250208625,4.95353323546643,4.98456649882625,6.21312374102184,0,0.798049746802062,0.682934423016537,0.243106717068294,0.209613162627982,0,0.222246727801615,0.412070114477788,0,1.01078884705519,0.50695859978048,0.754505365544305,0.842773567228942,0.832326981263301,1.14870937911227,0.476293691283074,1.27472758539341,1.15745532278223,1.23625770240992,0.294397840268795,1.02860775715625,0.70990322463735,0.238436189947321,0.290692833264657,0.846984423737976,0.423073039458382,1.09756783723664,0.789209134313529,0.271608227691724,0.561142271657738,0.474540072496697,1.0835493061312,1.22769312950907,0.929621047115796,0.385813221962283,1.74867404556562,1.40358965067245,0.859484216193193,0.57386499620653,0.441182838239031,0.695603506861264|short_description=p8@Sez6l2}} | ||
|EntrezGene=233878 | |||
|HGNC= | |||
|MCL_coexpression_id=159 | |||
|UniProt=Q4V9Z5 | |||
|association_with_transcript=108bp_to_ENSMUST00000106333,uc009jtq.1,uc009jtr.1,uc012ftx.1_5end | |||
|description=CAGE_peak_8_at_Sez6l2_5end | |||
|id=chr7:134094351..134094362,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.20e-17!23;CL:0000337!8.20e-17!23;CL:0000540!6.87e-12!33;CL:0000047!6.87e-12!33;CL:0000031!6.87e-12!33;CL:0000404!6.87e-12!33;CL:0000393!2.58e-08!39;CL:0000211!2.58e-08!39;CL:0000221!2.77e-07!44;CL:0000133!2.77e-07!44;CL:0002319!3.77e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.11e-26,23;CL:0000337,2.11e-26,23;CL:0000540,8.24e-18,33;CL:0000047,8.24e-18,33;CL:0000031,8.24e-18,33;CL:0000404,8.24e-18,33;CL:0000393,5.60e-14,39;CL:0000211,5.60e-14,39;CL:0002319,4.89e-12,43;CL:0000221,1.31e-11,44;CL:0000133,1.31e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.39e-34!71;UBERON:0003075!6.39e-34!71;UBERON:0007284!6.39e-34!71;UBERON:0001049!9.75e-28!52;UBERON:0005068!9.75e-28!52;UBERON:0006241!9.75e-28!52;UBERON:0007135!9.75e-28!52;UBERON:0000033!3.40e-27!63;UBERON:0001017!1.10e-25!73;UBERON:0005743!1.10e-25!73;UBERON:0004121!1.42e-25!102;UBERON:0000924!1.42e-25!102;UBERON:0006601!1.42e-25!102;UBERON:0000955!2.20e-25!50;UBERON:0006238!2.20e-25!50;UBERON:0000073!3.53e-25!75;UBERON:0001016!3.53e-25!75;UBERON:0002616!9.84e-25!49;UBERON:0003056!1.22e-24!49;UBERON:0003080!2.63e-21!40;UBERON:0002780!1.74e-20!39;UBERON:0001890!1.74e-20!39;UBERON:0006240!1.74e-20!39;UBERON:0002020!3.14e-19!34;UBERON:0002791!5.34e-15!29;UBERON:0003528!5.34e-15!29;UBERON:0001893!5.34e-15!29;UBERON:0007811!8.16e-14!86;UBERON:0000153!1.17e-11!94;UBERON:0000956!1.59e-09!21;UBERON:0001869!1.59e-09!21;UBERON:0000203!1.59e-09!21;UBERON:0002619!1.26e-07!17;UBERON:0002021!2.91e-07!10;UBERON:0000411!2.91e-07!10;UBERON:0001950!2.91e-07!10;UBERON:0002420!5.40e-07!8;UBERON:0007245!5.40e-07!8;UBERON:0010009!5.40e-07!8;UBERON:0010011!5.40e-07!8;UBERON:0000454!5.40e-07!8;UBERON:0003076!6.57e-07!12;UBERON:0003057!6.57e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.06e-46,54;UBERON:0001049,5.52e-44,52;UBERON:0005068,5.52e-44,52;UBERON:0006241,5.52e-44,52;UBERON:0007135,5.52e-44,52;UBERON:0001017,2.70e-42,73;UBERON:0002346,5.74e-42,64;UBERON:0003075,5.74e-42,64;UBERON:0007284,5.74e-42,64;UBERON:0001016,9.10e-41,75;UBERON:0000955,7.89e-36,47;UBERON:0006238,7.89e-36,47;UBERON:0010371,4.94e-35,73;UBERON:0002616,1.01e-34,46;UBERON:0004121,1.50e-34,95;UBERON:0000924,1.50e-34,95;UBERON:0006601,1.50e-34,95;UBERON:0003080,1.24e-31,40;UBERON:0002020,1.35e-30,34;UBERON:0003056,1.83e-30,49;UBERON:0002780,3.14e-30,39;UBERON:0001890,3.14e-30,39;UBERON:0006240,3.14e-30,39;UBERON:0010314,3.27e-26,92;UBERON:0003528,3.03e-23,29;UBERON:0002791,3.03e-23,29;UBERON:0001893,3.03e-23,29;UBERON:0000956,8.41e-14,21;UBERON:0001869,8.41e-14,21;UBERON:0000203,8.41e-14,21;UBERON:0000025,5.19e-13,114;UBERON:0003076,4.43e-12,12;UBERON:0003057,4.43e-12,12;UBERON:0002619,5.06e-12,17;UBERON:0002021,1.25e-11,10;UBERON:0000411,1.25e-11,10;UBERON:0001950,1.25e-11,10;UBERON:0004111,2.35e-11,122;UBERON:0002420,3.71e-11,8;UBERON:0007245,3.71e-11,8;UBERON:0010009,3.71e-11,8;UBERON:0010011,3.71e-11,8;UBERON:0000454,3.71e-11,8;UBERON:0002240,2.61e-10,6;UBERON:0005174,2.61e-10,6;UBERON:0001137,2.61e-10,6;UBERON:0001948,6.78e-09,5;UBERON:0002315,6.78e-09,5;UBERON:0001894,1.01e-07,10;UBERON:0006222,1.01e-07,10;UBERON:0002950,3.52e-07,4;UBERON:0001891,3.52e-07,4;UBERON:0009616,3.52e-07,4;UBERON:0010286,3.52e-07,4;UBERON:0000369,6.09e-07,5;UBERON:0002435,6.09e-07,5;UBERON:0000204,6.09e-07,5;UBERON:0010082,6.09e-07,5;UBERON:0011216,6.12e-07,194;UBERON:0000483,6.98e-07,174 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0.159992422793407,0.45881856213434,0,0,0.430942465371778,0.380046838912748,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85559506063035,4.7609188134483,3.1691570175309,0,0,0,0,0,0,0,0.933206510776299,1.21505344498522,1.26194976810829,11.7116903605559,13.2521124570968,1.10241719293459,1.62937300731002,1.83843757322004,4.40463523997555,6.2566795661742,5.9906547969935,2.90149833006426,4.20843160571084,2.6045668527838,10.0505879640497,7.87867654044352,9.47349136216223,13.258286346315,15.233769845504,9.13357284543973,0,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,1.63286352971307,0.520455980298408,0.304465478312141,0.691846491768175,0.452167921657868,0.823120949949934,0.502666365318702,0,0,0,0,0,0,0,3.80615036115011,3.77004072264219,0.255457055208591,0,0,0,7.63932260964596,4.11750542536764,2.76439574648302,4.51943232499919,2.81287003063364,4.1557608911912,2.59586020908412,0.101839363850316,0,0,0.631325567659422,0.260240885925407,0.689706313300419,0.900310649026746,1.20563854268572,1.36072998302656,1.0249097622788,1.40552586839593,0.517406741478031,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0.590292695242212,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.493679549740441,0.985004784474571,0.324275238183423,0.146199987425332,0.658650345873152,0,4.6263788684108,0.411618449517138,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0.407302655690628,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.90367536947505,5.15731421005694,0.163934945376675,0,0.94652465824877,0,1.29254038639679,0,0,0.283076530788832,0,0,0,1.92792789853084,0,0,0.162886959353576,0,0,0,0.302323556964751,0.377210159511796,0.885905678642318,0,0.516856586336442,0,0.356497378384721,0,1.05418608574999,0,9.19186935535228,0.36012218806262,1.03486947026204,0.428674070063185,1.95074257006501,2.49716344642899,3.29098041204242,7.30715877875038,0,0,0,0,0,0,0,0,0,9.27126510052548,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,1.14579102687879,1.3748254587495,1.37016503954128,1.5107877947794,6.07520250208625,4.95353323546643,4.98456649882625,6.21312374102184,0,0.798049746802062,0.682934423016537,0.243106717068294,0.209613162627982,0,0.222246727801615,0.412070114477788,0,1.01078884705519,0.50695859978048,0.754505365544305,0.842773567228942,0.832326981263301,1.14870937911227,0.476293691283074,1.27472758539341,1.15745532278223,1.23625770240992,0.294397840268795,1.02860775715625,0.70990322463735,0.238436189947321,0.290692833264657,0.846984423737976,0.423073039458382,1.09756783723664,0.789209134313529,0.271608227691724,0.561142271657738,0.474540072496697,1.0835493061312,1.22769312950907,0.929621047115796,0.385813221962283,1.74867404556562,1.40358965067245,0.859484216193193,0.57386499620653,0.441182838239031,0.695603506861264 | |||
|short_description=p8@Sez6l2 | |||
}} |
Revision as of 11:52, 14 September 2013
Short description: | p8@Sez6l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Sez6l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | 108bp_to_ENSMUST00000106333, uc009jtq.1, uc009jtr.1, uc012ftx.1_5end |
EntrezGene: | Sez6l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.11e-26 | 23 |
neuroblast (sensu Vertebrata) | 2.11e-26 | 23 |
neuron | 8.24e-18 | 33 |
neuronal stem cell | 8.24e-18 | 33 |
neuroblast | 8.24e-18 | 33 |
electrically signaling cell | 8.24e-18 | 33 |
electrically responsive cell | 5.60e-14 | 39 |
electrically active cell | 5.60e-14 | 39 |
neural cell | 4.89e-12 | 43 |
ectodermal cell | 1.31e-11 | 44 |
neurectodermal cell | 1.31e-11 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.