FFCP PHASE1:Mm9::chr8:107995347..107995358,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67971|HGNC=|MCL_coexpression_id=464|UniProt=Q9CRB6|association_with_transcript=-25bp_to_ENSMUST00000014990,NM_026481,uc009ndc.2_5end|description=CAGE_peak_3_at_Tppp3_5end|id=chr8:107995347..107995358,-|ontology_enrichment_celltype=CL:0002319!5.23e-08!43;CL:0000221!6.25e-08!44;CL:0000133!6.25e-08!44;CL:0000117!5.98e-07!23;CL:0000337!5.98e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-12,23;CL:0000337,1.23e-12,23;CL:0002319,1.14e-09,43;CL:0000221,2.77e-09,44;CL:0000133,2.77e-09,44;CL:0000540,6.53e-09,33;CL:0000047,6.53e-09,33;CL:0000031,6.53e-09,33;CL:0000404,6.53e-09,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.98e-15!75;UBERON:0001016!2.98e-15!75;UBERON:0004121!5.07e-15!102;UBERON:0000924!5.07e-15!102;UBERON:0006601!5.07e-15!102;UBERON:0001017!5.60e-15!73;UBERON:0005743!5.60e-15!73;UBERON:0002346!2.07e-12!71;UBERON:0003075!2.07e-12!71;UBERON:0007284!2.07e-12!71;UBERON:0001049!8.99e-12!52;UBERON:0005068!8.99e-12!52;UBERON:0006241!8.99e-12!52;UBERON:0007135!8.99e-12!52;UBERON:0000033!3.34e-11!63;UBERON:0000955!5.56e-10!50;UBERON:0006238!5.56e-10!50;UBERON:0002616!7.51e-10!49;UBERON:0003076!4.64e-09!12;UBERON:0003057!4.64e-09!12;UBERON:0002020!3.19e-07!34;UBERON:0003056!4.63e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.83e-16,73;UBERON:0000073,9.92e-16,54;UBERON:0001016,1.13e-15,75;UBERON:0003076,2.66e-14,12;UBERON:0003057,2.66e-14,12;UBERON:0001049,4.39e-14,52;UBERON:0005068,4.39e-14,52;UBERON:0006241,4.39e-14,52;UBERON:0007135,4.39e-14,52;UBERON:0004121,1.55e-13,95;UBERON:0000924,1.55e-13,95;UBERON:0006601,1.55e-13,95;UBERON:0002346,4.60e-13,64;UBERON:0003075,4.60e-13,64;UBERON:0007284,4.60e-13,64;UBERON:0010371,5.87e-11,73;UBERON:0002616,5.62e-09,46;UBERON:0002240,9.08e-09,6;UBERON:0005174,9.08e-09,6;UBERON:0001137,9.08e-09,6;UBERON:0000955,1.25e-08,47;UBERON:0006238,1.25e-08,47;UBERON:0002020,1.20e-07,34;UBERON:0001948,1.50e-07,5;UBERON:0002315,1.50e-07,5;UBERON:0010314,1.53e-07,92;UBERON:0002420,3.60e-07,8;UBERON:0007245,3.60e-07,8;UBERON:0010009,3.60e-07,8;UBERON:0010011,3.60e-07,8;UBERON:0000454,3.60e-07,8;UBERON:0004733,4.21e-07,6;UBERON:0004732,4.21e-07,6;UBERON:0002028,4.21e-07,6;UBERON:0007277,4.21e-07,6|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.595303031057488,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,1.09012578190223,0.878744730937887,1.55543919259427,1.39986421625363,0,0,0,0,0,0.286533439938757,0,3.23706337375356,1.05798195854407,4.43681982454325,0,0,0,0,0,0.599200221036809,3.45796474789399,0.103689612308478,0,0,14.2825492201902,13.9147180799517,0,0.191690942036473,0,4.40463523997555,3.06449611404451,5.83704826373725,1.45074916503213,3.11057988248193,2.6045668527838,11.1673199600552,7.87867654044352,8.40390362772456,9.1334861496837,9.681274294339,6.71038004971082,0.37863096666592,0.906858721281426,0.289864488701678,0,0,0.539703191637817,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.520455980298408,0,0.461230994512117,1.20578112442098,1.05829836422134,0.376999773989026,0,0.433798070759735,0.884610551949874,2.58826959915855,0.220841518460394,0,0,5.85561594023094,4.1889341362691,0,0,0.599902730993408,0,5.24267237916879,2.28750301409313,0.251308704225729,1.04294592115366,1.02286182932132,5.40248915854856,2.92034273521964,0.611036183101898,0,0,0.420883711772948,0,1.60931473103431,1.44049703844279,1.9591626318643,0.680364991513279,1.0249097622788,0.749613796477831,0.776110112217047,0.646703978798527,0.189106080167819,0.527853372491847,0.657587197282725,0.278047249225598,1.39300866608867,0.205782136407943,0,0.702213187313235,0.257347907114715,0.284163499395593,0.207125772535502,0.234526059981096,0.540186184383045,0,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0,1.31647879930784,0.492502392237286,0.486412857275134,0.292399974850665,0.439100230582101,0,0.841159794256509,0.205809224758569,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0.251335208800269,0.596869416123452,0.974820435595601,0.898819408654221,0.432276099749388,0.597423819763102,0.379335801906163,0.228497025219458,0,0.203651327845314,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,1.66277871149944,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0.167506257441816,0,0.780534591431195,0.788175720530955,0.221464689648775,1.75400245523236,0.983179888294428,0.690739927463582,1.01254341007058,0,0,0.491764273019036,0,10.1146871692309,13.5965556446956,0,0,0,0.390438744296638,0.646270193198397,0,0.891194696329576,1.41538265394416,0,1.16902343164525,0.395287777946524,0.642642632843614,0.283880170416537,0.35613120733451,0,0,0,0.242780636154981,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0.258428293168221,0.727067458955011,2.13898427030833,0,1.054186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| ||
|EntrezGene=67971 | |||
|HGNC= | |||
|MCL_coexpression_id=464 | |||
|UniProt=Q9CRB6 | |||
|association_with_transcript=-25bp_to_ENSMUST00000014990,NM_026481,uc009ndc.2_5end | |||
|description=CAGE_peak_3_at_Tppp3_5end | |||
|id=chr8:107995347..107995358,- | |||
|ontology_enrichment_celltype=CL:0002319!5.23e-08!43;CL:0000221!6.25e-08!44;CL:0000133!6.25e-08!44;CL:0000117!5.98e-07!23;CL:0000337!5.98e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-12,23;CL:0000337,1.23e-12,23;CL:0002319,1.14e-09,43;CL:0000221,2.77e-09,44;CL:0000133,2.77e-09,44;CL:0000540,6.53e-09,33;CL:0000047,6.53e-09,33;CL:0000031,6.53e-09,33;CL:0000404,6.53e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.98e-15!75;UBERON:0001016!2.98e-15!75;UBERON:0004121!5.07e-15!102;UBERON:0000924!5.07e-15!102;UBERON:0006601!5.07e-15!102;UBERON:0001017!5.60e-15!73;UBERON:0005743!5.60e-15!73;UBERON:0002346!2.07e-12!71;UBERON:0003075!2.07e-12!71;UBERON:0007284!2.07e-12!71;UBERON:0001049!8.99e-12!52;UBERON:0005068!8.99e-12!52;UBERON:0006241!8.99e-12!52;UBERON:0007135!8.99e-12!52;UBERON:0000033!3.34e-11!63;UBERON:0000955!5.56e-10!50;UBERON:0006238!5.56e-10!50;UBERON:0002616!7.51e-10!49;UBERON:0003076!4.64e-09!12;UBERON:0003057!4.64e-09!12;UBERON:0002020!3.19e-07!34;UBERON:0003056!4.63e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.83e-16,73;UBERON:0000073,9.92e-16,54;UBERON:0001016,1.13e-15,75;UBERON:0003076,2.66e-14,12;UBERON:0003057,2.66e-14,12;UBERON:0001049,4.39e-14,52;UBERON:0005068,4.39e-14,52;UBERON:0006241,4.39e-14,52;UBERON:0007135,4.39e-14,52;UBERON:0004121,1.55e-13,95;UBERON:0000924,1.55e-13,95;UBERON:0006601,1.55e-13,95;UBERON:0002346,4.60e-13,64;UBERON:0003075,4.60e-13,64;UBERON:0007284,4.60e-13,64;UBERON:0010371,5.87e-11,73;UBERON:0002616,5.62e-09,46;UBERON:0002240,9.08e-09,6;UBERON:0005174,9.08e-09,6;UBERON:0001137,9.08e-09,6;UBERON:0000955,1.25e-08,47;UBERON:0006238,1.25e-08,47;UBERON:0002020,1.20e-07,34;UBERON:0001948,1.50e-07,5;UBERON:0002315,1.50e-07,5;UBERON:0010314,1.53e-07,92;UBERON:0002420,3.60e-07,8;UBERON:0007245,3.60e-07,8;UBERON:0010009,3.60e-07,8;UBERON:0010011,3.60e-07,8;UBERON:0000454,3.60e-07,8;UBERON:0004733,4.21e-07,6;UBERON:0004732,4.21e-07,6;UBERON:0002028,4.21e-07,6;UBERON:0007277,4.21e-07,6 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.595303031057488,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,1.09012578190223,0.878744730937887,1.55543919259427,1.39986421625363,0,0,0,0,0,0.286533439938757,0,3.23706337375356,1.05798195854407,4.43681982454325,0,0,0,0,0,0.599200221036809,3.45796474789399,0.103689612308478,0,0,14.2825492201902,13.9147180799517,0,0.191690942036473,0,4.40463523997555,3.06449611404451,5.83704826373725,1.45074916503213,3.11057988248193,2.6045668527838,11.1673199600552,7.87867654044352,8.40390362772456,9.1334861496837,9.681274294339,6.71038004971082,0.37863096666592,0.906858721281426,0.289864488701678,0,0,0.539703191637817,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.520455980298408,0,0.461230994512117,1.20578112442098,1.05829836422134,0.376999773989026,0,0.433798070759735,0.884610551949874,2.58826959915855,0.220841518460394,0,0,5.85561594023094,4.1889341362691,0,0,0.599902730993408,0,5.24267237916879,2.28750301409313,0.251308704225729,1.04294592115366,1.02286182932132,5.40248915854856,2.92034273521964,0.611036183101898,0,0,0.420883711772948,0,1.60931473103431,1.44049703844279,1.9591626318643,0.680364991513279,1.0249097622788,0.749613796477831,0.776110112217047,0.646703978798527,0.189106080167819,0.527853372491847,0.657587197282725,0.278047249225598,1.39300866608867,0.205782136407943,0,0.702213187313235,0.257347907114715,0.284163499395593,0.207125772535502,0.234526059981096,0.540186184383045,0,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0,1.31647879930784,0.492502392237286,0.486412857275134,0.292399974850665,0.439100230582101,0,0.841159794256509,0.205809224758569,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0.251335208800269,0.596869416123452,0.974820435595601,0.898819408654221,0.432276099749388,0.597423819763102,0.379335801906163,0.228497025219458,0,0.203651327845314,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,1.66277871149944,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0.167506257441816,0,0.780534591431195,0.788175720530955,0.221464689648775,1.75400245523236,0.983179888294428,0.690739927463582,1.01254341007058,0,0,0.491764273019036,0,10.1146871692309,13.5965556446956,0,0,0,0.390438744296638,0.646270193198397,0,0.891194696329576,1.41538265394416,0,1.16902343164525,0.395287777946524,0.642642632843614,0.283880170416537,0.35613120733451,0,0,0,0.242780636154981,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0.258428293168221,0.727067458955011,2.13898427030833,0,1.05418608574999,0,0,0.18006109403131,0.258717367565509,0.428674070063185,0,0.535106452806212,1.64549020602121,3.95804433848979,0,0,0.882113592219848,0,1.61464426695906,0.422190474497091,0.119372344003136,0.328281799490123,0,11.4963687246516,0.170870880797853,0,0,0,0,0,0,0.279902904647316,0.276399947608848,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.539457385539283,0.330613822901344,0.785267825952089,0.518459893167171,0,0.56369293868419,0,0.165458490457098,0.583353565032143,0.129159823477731,0.168956125490778,0,0,0.314578033277133,0.241584120826006,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0.292373642219257,0,0,0.680191150845634,0,0,0.167884616364078,1.35232715822533,0.563047426353546,0.36630324853453,0.214368379079066,0,0.564751842617067,1.38097570952153,0.572895513439397,0.343706364687375,1.37016503954128,1.5107877947794,0.675022500231806,1.35096360967266,1.81256963593682,0.51776031175182,0.726511433089237,0,1.36586884603307,0.972426868273176,1.25767897576789,2.20612210140017,2.889207461421,2.26638562962784,2.56735367673452,1.26348605881899,2.02783439912192,1.88626341386076,1.87283014939765,1.02440243847791,1.7230640686684,1.42888107384922,1.50649623728312,1.35036454324594,0.824171801606613,2.64958056241915,2.40008476669791,2.8396128985494,2.14592570952589,1.30811774969096,1.78807822789128,1.4384483341585,0.548783918618318,0.789209134313529,1.22223702461276,1.12228454331548,1.77952527186261,1.47756723563345,2.86461730218783,1.70430525304563,1.35034627686799,1.99848462350357,0.701794825336225,0.644613162144895,1.14772999241306,1.76473135295612,0.695603506861264 | |||
|short_description=p3@Tppp3 | |||
}} |
Revision as of 14:35, 14 September 2013
Short description: | p3@Tppp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tppp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:464 |
Association with transcript: | -25bp_to_ENSMUST00000014990, NM_026481, uc009ndc.2_5end |
EntrezGene: | Tppp3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.23e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.23e-12 | 23 |
neural cell | 1.14e-09 | 43 |
ectodermal cell | 2.77e-09 | 44 |
neurectodermal cell | 2.77e-09 | 44 |
neuron | 6.53e-09 | 33 |
neuronal stem cell | 6.53e-09 | 33 |
neuroblast | 6.53e-09 | 33 |
electrically signaling cell | 6.53e-09 | 33 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.