FFCP PHASE1:Mm9::chr9:57352338..57352369,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3713|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:57352338..57352369,+|id=chr9:57352338..57352369,+|ontology_enrichment_celltype=CL:0000117!3.23e-09!23;CL:0000337!3.23e-09!23;CL:0000540!1.23e-08!33;CL:0000047!1.23e-08!33;CL:0000031!1.23e-08!33;CL:0000404!1.23e-08!33;CL:0000393!3.38e-07!39;CL:0000211!3.38e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.50e-11,23;CL:0000337,3.50e-11,23;CL:0000540,5.57e-09,33;CL:0000047,5.57e-09,33;CL:0000031,5.57e-09,33;CL:0000404,5.57e-09,33;CL:0000393,1.18e-08,39;CL:0000211,1.18e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.23e-13!73;UBERON:0005743!1.23e-13!73;UBERON:0000073!2.46e-13!75;UBERON:0001016!2.46e-13!75;UBERON:0002346!7.92e-13!71;UBERON:0003075!7.92e-13!71;UBERON:0007284!7.92e-13!71;UBERON:0002020!2.22e-12!34;UBERON:0000955!3.34e-12!50;UBERON:0006238!3.34e-12!50;UBERON:0002791!1.14e-11!29;UBERON:0003528!1.14e-11!29;UBERON:0001893!1.14e-11!29;UBERON:0002616!1.50e-11!49;UBERON:0001049!1.89e-11!52;UBERON:0005068!1.89e-11!52;UBERON:0006241!1.89e-11!52;UBERON:0007135!1.89e-11!52;UBERON:0004121!2.61e-11!102;UBERON:0000924!2.61e-11!102;UBERON:0006601!2.61e-11!102;UBERON:0000033!1.11e-09!63;UBERON:0003080!1.78e-09!40;UBERON:0002780!7.30e-09!39;UBERON:0001890!7.30e-09!39;UBERON:0006240!7.30e-09!39;UBERON:0003056!1.12e-08!49;UBERON:0000956!1.19e-07!21;UBERON:0001869!1.19e-07!21;UBERON:0000203!1.19e-07!21;UBERON:0000991!3.12e-07!18;UBERON:0005564!3.12e-07!18;UBERON:0002619!4.19e-07!17;UBERON:0002021!4.91e-07!10;UBERON:0000411!4.91e-07!10;UBERON:0001950!4.91e-07!10;UBERON:0004176!9.26e-07!17;UBERON:0009196!9.26e-07!17;UBERON:0009117!9.26e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.83e-21,73;UBERON:0001016,6.38e-20,75;UBERON:0000073,1.43e-19,54;UBERON:0002020,7.45e-18,34;UBERON:0001049,8.65e-18,52;UBERON:0005068,8.65e-18,52;UBERON:0006241,8.65e-18,52;UBERON:0007135,8.65e-18,52;UBERON:0003528,3.50e-17,29;UBERON:0002791,3.50e-17,29;UBERON:0001893,3.50e-17,29;UBERON:0000955,7.75e-17,47;UBERON:0006238,7.75e-17,47;UBERON:0002616,9.49e-16,46;UBERON:0002346,2.05e-15,64;UBERON:0003075,2.05e-15,64;UBERON:0007284,2.05e-15,64;UBERON:0010314,2.30e-15,92;UBERON:0003080,8.58e-15,40;UBERON:0004121,6.99e-14,95;UBERON:0000924,6.99e-14,95;UBERON:0006601,6.99e-14,95;UBERON:0002780,1.00e-13,39;UBERON:0001890,1.00e-13,39;UBERON:0006240,1.00e-13,39;UBERON:0010371,3.38e-12,73;UBERON:0003056,1.22e-11,49;UBERON:0002619,1.58e-11,17;UBERON:0002021,2.51e-11,10;UBERON:0000411,2.51e-11,10;UBERON:0001950,2.51e-11,10;UBERON:0000991,1.75e-10,18;UBERON:0005564,1.75e-10,18;UBERON:0000956,2.75e-10,21;UBERON:0001869,2.75e-10,21;UBERON:0000203,2.75e-10,21;UBERON:0004176,1.15e-09,17;UBERON:0009196,1.15e-09,17;UBERON:0009117,1.15e-09,17;UBERON:0002420,1.29e-08,8;UBERON:0007245,1.29e-08,8;UBERON:0010009,1.29e-08,8;UBERON:0010011,1.29e-08,8;UBERON:0000454,1.29e-08,8;UBERON:0000025,3.19e-08,114;UBERON:0004111,5.82e-07,122;UBERON:0000473,6.53e-07,14;UBERON:0003133,6.60e-07,24|phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,1.02903774414379,4.01146815914259,0,4.85559506063035,3.1739458756322,3.1691570175309,2.03306719241479,0.889294796111139,0,0,0,0,0,0.518448061542388,0.540023753326763,0.210324961351382,0.856952953211411,1.10434270475807,0.61245399607477,1.15014565221884,3.67687514644008,3.30347642998166,3.31987079021488,2.30409799884365,2.1101806036831,2.56165402086747,1.56274011167028,3.35019598801657,1.12552522006336,3.0559649555362,0,2.98980529678116,1.4911955666024,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.890652834388949,0.867426633830679,0.608930956624282,0.461230994512117,1.05505848386836,0.823120949949934,0.251333182659351,0.741584903203122,0,0,0,0,0,0,1.46390398505774,0.628340120440365,0.255457055208591,0,0,0,9.13722900369418,4.11750542536764,2.1361239859187,5.73620256634512,3.83573185995496,4.57133698031032,2.59586020908412,2.13862664085664,0,0,0.631325567659422,0,0,0.180062129805349,0.30140963567143,0.272145996605311,0.2562274405697,0.281105173679186,1.81092359517311,0,0,0,0.219195732427575,0,0,0,2.18937693500343,0,0,0,0.828503090142008,0.938104239924385,0.36012412292203,1.65721314909647,2.55793501271625,1.3884040159864,1.39520366850245,0.804820204198858,1.28441876603886,1.97471819896177,1.64167464079095,0.891756905004413,0.584799949701329,0.439100230582101,0.671032093801859,2.94405927989778,2.26390147234426,0,0,0.426576501070468,0.696710015581316,0.77320476793256,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.823494773620054,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0.324270453550071,0,0,0,0.31203767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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3713 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:57352338..57352369,+ | |||
|id=chr9:57352338..57352369,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.23e-09!23;CL:0000337!3.23e-09!23;CL:0000540!1.23e-08!33;CL:0000047!1.23e-08!33;CL:0000031!1.23e-08!33;CL:0000404!1.23e-08!33;CL:0000393!3.38e-07!39;CL:0000211!3.38e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.50e-11,23;CL:0000337,3.50e-11,23;CL:0000540,5.57e-09,33;CL:0000047,5.57e-09,33;CL:0000031,5.57e-09,33;CL:0000404,5.57e-09,33;CL:0000393,1.18e-08,39;CL:0000211,1.18e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.23e-13!73;UBERON:0005743!1.23e-13!73;UBERON:0000073!2.46e-13!75;UBERON:0001016!2.46e-13!75;UBERON:0002346!7.92e-13!71;UBERON:0003075!7.92e-13!71;UBERON:0007284!7.92e-13!71;UBERON:0002020!2.22e-12!34;UBERON:0000955!3.34e-12!50;UBERON:0006238!3.34e-12!50;UBERON:0002791!1.14e-11!29;UBERON:0003528!1.14e-11!29;UBERON:0001893!1.14e-11!29;UBERON:0002616!1.50e-11!49;UBERON:0001049!1.89e-11!52;UBERON:0005068!1.89e-11!52;UBERON:0006241!1.89e-11!52;UBERON:0007135!1.89e-11!52;UBERON:0004121!2.61e-11!102;UBERON:0000924!2.61e-11!102;UBERON:0006601!2.61e-11!102;UBERON:0000033!1.11e-09!63;UBERON:0003080!1.78e-09!40;UBERON:0002780!7.30e-09!39;UBERON:0001890!7.30e-09!39;UBERON:0006240!7.30e-09!39;UBERON:0003056!1.12e-08!49;UBERON:0000956!1.19e-07!21;UBERON:0001869!1.19e-07!21;UBERON:0000203!1.19e-07!21;UBERON:0000991!3.12e-07!18;UBERON:0005564!3.12e-07!18;UBERON:0002619!4.19e-07!17;UBERON:0002021!4.91e-07!10;UBERON:0000411!4.91e-07!10;UBERON:0001950!4.91e-07!10;UBERON:0004176!9.26e-07!17;UBERON:0009196!9.26e-07!17;UBERON:0009117!9.26e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.83e-21,73;UBERON:0001016,6.38e-20,75;UBERON:0000073,1.43e-19,54;UBERON:0002020,7.45e-18,34;UBERON:0001049,8.65e-18,52;UBERON:0005068,8.65e-18,52;UBERON:0006241,8.65e-18,52;UBERON:0007135,8.65e-18,52;UBERON:0003528,3.50e-17,29;UBERON:0002791,3.50e-17,29;UBERON:0001893,3.50e-17,29;UBERON:0000955,7.75e-17,47;UBERON:0006238,7.75e-17,47;UBERON:0002616,9.49e-16,46;UBERON:0002346,2.05e-15,64;UBERON:0003075,2.05e-15,64;UBERON:0007284,2.05e-15,64;UBERON:0010314,2.30e-15,92;UBERON:0003080,8.58e-15,40;UBERON:0004121,6.99e-14,95;UBERON:0000924,6.99e-14,95;UBERON:0006601,6.99e-14,95;UBERON:0002780,1.00e-13,39;UBERON:0001890,1.00e-13,39;UBERON:0006240,1.00e-13,39;UBERON:0010371,3.38e-12,73;UBERON:0003056,1.22e-11,49;UBERON:0002619,1.58e-11,17;UBERON:0002021,2.51e-11,10;UBERON:0000411,2.51e-11,10;UBERON:0001950,2.51e-11,10;UBERON:0000991,1.75e-10,18;UBERON:0005564,1.75e-10,18;UBERON:0000956,2.75e-10,21;UBERON:0001869,2.75e-10,21;UBERON:0000203,2.75e-10,21;UBERON:0004176,1.15e-09,17;UBERON:0009196,1.15e-09,17;UBERON:0009117,1.15e-09,17;UBERON:0002420,1.29e-08,8;UBERON:0007245,1.29e-08,8;UBERON:0010009,1.29e-08,8;UBERON:0010011,1.29e-08,8;UBERON:0000454,1.29e-08,8;UBERON:0000025,3.19e-08,114;UBERON:0004111,5.82e-07,122;UBERON:0000473,6.53e-07,14;UBERON:0003133,6.60e-07,24 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,1.02903774414379,4.01146815914259,0,4.85559506063035,3.1739458756322,3.1691570175309,2.03306719241479,0.889294796111139,0,0,0,0,0,0.518448061542388,0.540023753326763,0.210324961351382,0.856952953211411,1.10434270475807,0.61245399607477,1.15014565221884,3.67687514644008,3.30347642998166,3.31987079021488,2.30409799884365,2.1101806036831,2.56165402086747,1.56274011167028,3.35019598801657,1.12552522006336,3.0559649555362,0,2.98980529678116,1.4911955666024,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.890652834388949,0.867426633830679,0.608930956624282,0.461230994512117,1.05505848386836,0.823120949949934,0.251333182659351,0.741584903203122,0,0,0,0,0,0,1.46390398505774,0.628340120440365,0.255457055208591,0,0,0,9.13722900369418,4.11750542536764,2.1361239859187,5.73620256634512,3.83573185995496,4.57133698031032,2.59586020908412,2.13862664085664,0,0,0.631325567659422,0,0,0.180062129805349,0.30140963567143,0.272145996605311,0.2562274405697,0.281105173679186,1.81092359517311,0,0,0,0.219195732427575,0,0,0,2.18937693500343,0,0,0,0.828503090142008,0.938104239924385,0.36012412292203,1.65721314909647,2.55793501271625,1.3884040159864,1.39520366850245,0.804820204198858,1.28441876603886,1.97471819896177,1.64167464079095,0.891756905004413,0.584799949701329,0.439100230582101,0.671032093801859,2.94405927989778,2.26390147234426,0,0,0.426576501070468,0.696710015581316,0.77320476793256,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.823494773620054,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0.324270453550071,0,0,0,0.312037673114561,0,0,0,0,0,0.325929952884052,0.169745085775188,0,0.335012514883631,0,0.585400943573396,0,0,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,4.17431533968259,3.39913891117389,0,0,0.315508219416257,1.17131623288992,1.07711698866399,0,0.445597348164788,0.283076530788832,0.404810701674894,1.16902343164525,0.395287777946524,15.4234231882467,5.10984306749767,3.20518086601059,1.79175655288934,0.329940245945071,0,1.21390318077491,0.302323556964751,0.377210159511796,0.590603785761546,0.614870295887855,0.775284879504663,0,0,0,1.05418608574999,0,0.680879211507576,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0,0.120625849856312,0.238744688006273,0,0.291480836629851,3.70850604021019,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,2.86401185404534,0,0.203319467126849,0.216010681643603,0,0.218362563746178,1.21377911746339,0.578574190077352,1.30877970992015,0,0,2.25477175473676,4.48549638131936,3.97100377097034,3.69457257853691,2.0665571756437,3.04121025883401,2.22978753426933,1.5624526181274,0.943734099831398,1.20792060413003,0.576060012515731,0,0.202725215290164,0,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,0,0.221985953374065,0.0897138566094757,0.335769232728157,0.772758376128762,0.187682475451182,0.36630324853453,0.214368379079066,0,2.82375921308533,2.76195141904306,1.14579102687879,1.89038500578056,2.74033007908257,2.2661816921691,5.40018000185445,4.05289082901798,2.71885445390523,5.1776031175182,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,1.04806581313991,0.183843508450014,0.44449345560323,0.206035057238894,1.60459604795908,0.505394423527595,0.50695859978048,0.943131706930381,0.561849044819294,0.832326981263301,0.574354689556133,0.476293691283074,0.695305955669133,0.578727661391115,0.412085900803307,0.147198920134397,1.71434626192708,0.354951612318675,0.715308569841963,0.726732083161643,0.282328141245992,0.507687647350059,0.548783918618318,1.05227884575137,0.543216455383447,0.561142271657738,0.830445126869219,0.591026894253381,0.409231043169689,0.619747364743864,0,1.74867404556562,0.935726433781634,1.50409737833809,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr9:57352338..57352369,+ | |||
}} |
Revision as of 18:19, 14 September 2013
Short description: | p@chr9:57352338..57352369, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:57352338..57352369, + |
Coexpression cluster: | MCL_coexpression_mm9:3713 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.50e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.50e-11 | 23 |
neuron | 5.57e-09 | 33 |
neuronal stem cell | 5.57e-09 | 33 |
neuroblast | 5.57e-09 | 33 |
electrically signaling cell | 5.57e-09 | 33 |
electrically responsive cell | 1.18e-08 | 39 |
electrically active cell | 1.18e-08 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.