FFCP PHASE1:Mm9::chrX:162782924..162782963,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14758|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=150bp_to_ENSMUST00000129731_5end|description=CAGE_peak_4_at_Gpm6b_5end|id=chrX:162782924..162782963,+|ontology_enrichment_celltype=CL:0000221!1.17e-18!44;CL:0000133!1.17e-18!44;CL:0002319!3.38e-18!43;CL:0000540!2.30e-17!33;CL:0000047!2.30e-17!33;CL:0000031!2.30e-17!33;CL:0000404!2.30e-17!33;CL:0000055!3.47e-14!50;CL:0000393!1.40e-13!39;CL:0000211!1.40e-13!39;CL:0000117!2.02e-12!23;CL:0000337!2.02e-12!23|ontology_enrichment_celltype_v019_2=CL:0000540,2.37e-24,33;CL:0000047,2.37e-24,33;CL:0000031,2.37e-24,33;CL:0000404,2.37e-24,33;CL:0000221,1.03e-23,44;CL:0000133,1.03e-23,44;CL:0002319,4.66e-23,43;CL:0000393,5.95e-20,39;CL:0000211,5.95e-20,39;CL:0000117,3.27e-17,23;CL:0000337,3.27e-17,23;CL:0002321,9.54e-11,70;CL:0000107,2.02e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!8.84e-36!75;UBERON:0001016!8.84e-36!75;UBERON:0001017!4.11e-35!73;UBERON:0005743!4.11e-35!73;UBERON:0004121!9.58e-35!102;UBERON:0000924!9.58e-35!102;UBERON:0006601!9.58e-35!102;UBERON:0000033!2.24e-28!63;UBERON:0002346!3.77e-28!71;UBERON:0003075!3.77e-28!71;UBERON:0007284!3.77e-28!71;UBERON:0001049!1.02e-24!52;UBERON:0005068!1.02e-24!52;UBERON:0006241!1.02e-24!52;UBERON:0007135!1.02e-24!52;UBERON:0000955!1.41e-23!50;UBERON:0006238!1.41e-23!50;UBERON:0002616!6.72e-23!49;UBERON:0003056!8.97e-23!49;UBERON:0002020!1.46e-21!34;UBERON:0003080!2.09e-19!40;UBERON:0002791!5.70e-19!29;UBERON:0003528!5.70e-19!29;UBERON:0001893!5.70e-19!29;UBERON:0002780!7.18e-19!39;UBERON:0001890!7.18e-19!39;UBERON:0006240!7.18e-19!39;UBERON:0000956!1.28e-14!21;UBERON:0001869!1.28e-14!21;UBERON:0000203!1.28e-14!21;UBERON:0007811!8.16e-14!86;UBERON:0002619!5.85e-12!17;UBERON:0000153!9.00e-11!94;UBERON:0002021!1.22e-08!10;UBERON:0000411!1.22e-08!10;UBERON:0001950!1.22e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.89e-43,73;UBERON:0001016,1.38e-42,75;UBERON:0004121,3.28e-40,95;UBERON:0000924,3.28e-40,95;UBERON:0006601,3.28e-40,95;UBERON:0002346,4.70e-36,64;UBERON:0003075,4.70e-36,64;UBERON:0007284,4.70e-36,64;UBERON:0010371,5.00e-32,73;UBERON:0000073,1.84e-31,54;UBERON:0002020,2.02e-30,34;UBERON:0001049,4.82e-30,52;UBERON:0005068,4.82e-30,52;UBERON:0006241,4.82e-30,52;UBERON:0007135,4.82e-30,52;UBERON:0003528,1.13e-26,29;UBERON:0002791,1.13e-26,29;UBERON:0001893,1.13e-26,29;UBERON:0000955,3.39e-26,47;UBERON:0006238,3.39e-26,47;UBERON:0003056,1.38e-25,49;UBERON:0002616,2.85e-25,46;UBERON:0010314,3.86e-22,92;UBERON:0003080,4.35e-22,40;UBERON:0002780,2.43e-21,39;UBERON:0001890,2.43e-21,39;UBERON:0006240,2.43e-21,39;UBERON:0000956,2.21e-20,21;UBERON:0001869,2.21e-20,21;UBERON:0000203,2.21e-20,21;UBERON:0002619,1.51e-16,17;UBERON:0002021,9.12e-12,10;UBERON:0000411,9.12e-12,10;UBERON:0001950,9.12e-12,10;UBERON:0003076,2.62e-08,12;UBERON:0003057,2.62e-08,12;UBERON:0002410,2.02e-07,9;UBERON:0002420,2.21e-07,8;UBERON:0007245,2.21e-07,8;UBERON:0010009,2.21e-07,8;UBERON:0010011,2.21e-07,8;UBERON:0000454,2.21e-07,8;UBERON:0000010,6.71e-07,11|phase1_expression=4.32401887182944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,1.30815093828268,1.5378032791413,1.74986909166855,1.67983705950435,1.43752564364972,0,0,0,0,1.43266719969378,0,3.03474691289397,2.64495489636016,1.90149421051854,0.338844532069132,0,0,0,0,0.599200221036809,0.384218305321555,9.7468235569969,7.42532660824299,8.62332341540666,3.14216082844184,2.65042249141936,6.85948475603743,5.46319184803947,2.75765635983006,3.30347642998166,4.21368215681119,4.45458946443106,2.63772575460388,3.38504281328916,5.73004707612436,3.35019598801657,6.19038871034848,4.5839474333043,7.36571463684169,6.97621235915604,3.72798891650601,0.984440513331393,1.96486056277642,0,0,0,0,0,0,0.842666520790511,0,0,0,3.23939865486365,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0.173485326766136,0.608930956624282,0,0.60289056221049,0.470354828542819,0.125666591329675,0,0.433798070759735,0,0.323533699894818,0,0.484875253135222,0,12.5895742714965,16.9651832518899,0.510914110417183,0,0,0,4.34392854273986,16.9275223042892,9.80103946480342,16.5133104182663,14.8314965251592,7.06479351502504,8.76102820565891,0.305518091550949,0,0,0.210441855886474,0.390361328888111,2.06911893990126,3.06105620669094,3.76762044589288,6.05524842446818,8.71173297936978,5.24729657534481,3.62184719034622,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0.405344047729279,0.292399974850665,0,0.402619256281115,17.6643556793867,18.7286394530298,0.330418782983798,0,0.426576501070468,0.232236671860439,0.902072229254653,0,0.22237804384487,0.190225626112559,0,0.494096864172033,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,1.43768206527355,0,0,0.25257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| ||
|EntrezGene=14758 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt= | |||
|association_with_transcript=150bp_to_ENSMUST00000129731_5end | |||
|description=CAGE_peak_4_at_Gpm6b_5end | |||
|id=chrX:162782924..162782963,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.17e-18!44;CL:0000133!1.17e-18!44;CL:0002319!3.38e-18!43;CL:0000540!2.30e-17!33;CL:0000047!2.30e-17!33;CL:0000031!2.30e-17!33;CL:0000404!2.30e-17!33;CL:0000055!3.47e-14!50;CL:0000393!1.40e-13!39;CL:0000211!1.40e-13!39;CL:0000117!2.02e-12!23;CL:0000337!2.02e-12!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.37e-24,33;CL:0000047,2.37e-24,33;CL:0000031,2.37e-24,33;CL:0000404,2.37e-24,33;CL:0000221,1.03e-23,44;CL:0000133,1.03e-23,44;CL:0002319,4.66e-23,43;CL:0000393,5.95e-20,39;CL:0000211,5.95e-20,39;CL:0000117,3.27e-17,23;CL:0000337,3.27e-17,23;CL:0002321,9.54e-11,70;CL:0000107,2.02e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.84e-36!75;UBERON:0001016!8.84e-36!75;UBERON:0001017!4.11e-35!73;UBERON:0005743!4.11e-35!73;UBERON:0004121!9.58e-35!102;UBERON:0000924!9.58e-35!102;UBERON:0006601!9.58e-35!102;UBERON:0000033!2.24e-28!63;UBERON:0002346!3.77e-28!71;UBERON:0003075!3.77e-28!71;UBERON:0007284!3.77e-28!71;UBERON:0001049!1.02e-24!52;UBERON:0005068!1.02e-24!52;UBERON:0006241!1.02e-24!52;UBERON:0007135!1.02e-24!52;UBERON:0000955!1.41e-23!50;UBERON:0006238!1.41e-23!50;UBERON:0002616!6.72e-23!49;UBERON:0003056!8.97e-23!49;UBERON:0002020!1.46e-21!34;UBERON:0003080!2.09e-19!40;UBERON:0002791!5.70e-19!29;UBERON:0003528!5.70e-19!29;UBERON:0001893!5.70e-19!29;UBERON:0002780!7.18e-19!39;UBERON:0001890!7.18e-19!39;UBERON:0006240!7.18e-19!39;UBERON:0000956!1.28e-14!21;UBERON:0001869!1.28e-14!21;UBERON:0000203!1.28e-14!21;UBERON:0007811!8.16e-14!86;UBERON:0002619!5.85e-12!17;UBERON:0000153!9.00e-11!94;UBERON:0002021!1.22e-08!10;UBERON:0000411!1.22e-08!10;UBERON:0001950!1.22e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.89e-43,73;UBERON:0001016,1.38e-42,75;UBERON:0004121,3.28e-40,95;UBERON:0000924,3.28e-40,95;UBERON:0006601,3.28e-40,95;UBERON:0002346,4.70e-36,64;UBERON:0003075,4.70e-36,64;UBERON:0007284,4.70e-36,64;UBERON:0010371,5.00e-32,73;UBERON:0000073,1.84e-31,54;UBERON:0002020,2.02e-30,34;UBERON:0001049,4.82e-30,52;UBERON:0005068,4.82e-30,52;UBERON:0006241,4.82e-30,52;UBERON:0007135,4.82e-30,52;UBERON:0003528,1.13e-26,29;UBERON:0002791,1.13e-26,29;UBERON:0001893,1.13e-26,29;UBERON:0000955,3.39e-26,47;UBERON:0006238,3.39e-26,47;UBERON:0003056,1.38e-25,49;UBERON:0002616,2.85e-25,46;UBERON:0010314,3.86e-22,92;UBERON:0003080,4.35e-22,40;UBERON:0002780,2.43e-21,39;UBERON:0001890,2.43e-21,39;UBERON:0006240,2.43e-21,39;UBERON:0000956,2.21e-20,21;UBERON:0001869,2.21e-20,21;UBERON:0000203,2.21e-20,21;UBERON:0002619,1.51e-16,17;UBERON:0002021,9.12e-12,10;UBERON:0000411,9.12e-12,10;UBERON:0001950,9.12e-12,10;UBERON:0003076,2.62e-08,12;UBERON:0003057,2.62e-08,12;UBERON:0002410,2.02e-07,9;UBERON:0002420,2.21e-07,8;UBERON:0007245,2.21e-07,8;UBERON:0010009,2.21e-07,8;UBERON:0010011,2.21e-07,8;UBERON:0000454,2.21e-07,8;UBERON:0000010,6.71e-07,11 | |||
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|short_description=p4@Gpm6b | |||
}} |
Revision as of 19:39, 14 September 2013
Short description: | p4@Gpm6b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gpm6b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 150bp_to_ENSMUST00000129731_5end |
EntrezGene: | Gpm6b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.37e-24 | 33 |
neuronal stem cell | 2.37e-24 | 33 |
neuroblast | 2.37e-24 | 33 |
electrically signaling cell | 2.37e-24 | 33 |
ectodermal cell | 1.03e-23 | 44 |
neurectodermal cell | 1.03e-23 | 44 |
neural cell | 4.66e-23 | 43 |
electrically responsive cell | 5.95e-20 | 39 |
electrically active cell | 5.95e-20 | 39 |
CNS neuron (sensu Vertebrata) | 3.27e-17 | 23 |
neuroblast (sensu Vertebrata) | 3.27e-17 | 23 |
embryonic cell | 9.54e-11 | 70 |
autonomic neuron | 2.02e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.