FFCP PHASE1:Mm9::chrX:56387556..56387569,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14168|HGNC=|MCL_coexpression_id=159|UniProt=Q8VCY9|association_with_transcript=43bp_to_ENSMUST00000033473,NM_010200,uc009tht.1_5end|description=CAGE_peak_11_at_Fgf13_5end|id=chrX:56387556..56387569,-|ontology_enrichment_celltype=CL:0000117!4.78e-14!23;CL:0000337!4.78e-14!23;CL:0000540!3.49e-08!33;CL:0000047!3.49e-08!33;CL:0000031!3.49e-08!33;CL:0000404!3.49e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,7.79e-25,23;CL:0000337,7.79e-25,23;CL:0000540,1.27e-15,33;CL:0000047,1.27e-15,33;CL:0000031,1.27e-15,33;CL:0000404,1.27e-15,33;CL:0000393,2.15e-12,39;CL:0000211,2.15e-12,39;CL:0002319,9.40e-11,43;CL:0000221,2.16e-10,44;CL:0000133,2.16e-10,44;CL:0002610,9.38e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.82e-19!52;UBERON:0005068!1.82e-19!52;UBERON:0006241!1.82e-19!52;UBERON:0007135!1.82e-19!52;UBERON:0001017!6.96e-19!73;UBERON:0005743!6.96e-19!73;UBERON:0000033!1.80e-18!63;UBERON:0003056!1.95e-18!49;UBERON:0000073!4.38e-18!75;UBERON:0001016!4.38e-18!75;UBERON:0002346!6.69e-18!71;UBERON:0003075!6.69e-18!71;UBERON:0007284!6.69e-18!71;UBERON:0000955!8.43e-18!50;UBERON:0006238!8.43e-18!50;UBERON:0002616!1.85e-17!49;UBERON:0002020!1.21e-16!34;UBERON:0004121!3.70e-16!102;UBERON:0000924!3.70e-16!102;UBERON:0006601!3.70e-16!102;UBERON:0003080!4.30e-16!40;UBERON:0002780!2.12e-15!39;UBERON:0001890!2.12e-15!39;UBERON:0006240!2.12e-15!39;UBERON:0002791!3.99e-13!29;UBERON:0003528!3.99e-13!29;UBERON:0001893!3.99e-13!29;UBERON:0000153!1.32e-11!94;UBERON:0007811!1.86e-11!86;UBERON:0000956!3.42e-08!21;UBERON:0001869!3.42e-08!21;UBERON:0000203!3.42e-08!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.65e-32,54;UBERON:0001049,9.12e-29,52;UBERON:0005068,9.12e-29,52;UBERON:0006241,9.12e-29,52;UBERON:0007135,9.12e-29,52;UBERON:0001017,4.23e-28,73;UBERON:0001016,4.53e-27,75;UBERON:0002020,1.08e-25,34;UBERON:0002346,7.78e-25,64;UBERON:0003075,7.78e-25,64;UBERON:0007284,7.78e-25,64;UBERON:0004121,9.83e-22,95;UBERON:0000924,9.83e-22,95;UBERON:0006601,9.83e-22,95;UBERON:0010371,1.34e-20,73;UBERON:0002616,2.14e-20,46;UBERON:0003080,3.65e-20,40;UBERON:0000955,8.39e-20,47;UBERON:0006238,8.39e-20,47;UBERON:0002780,7.92e-19,39;UBERON:0001890,7.92e-19,39;UBERON:0006240,7.92e-19,39;UBERON:0003528,2.42e-18,29;UBERON:0002791,2.42e-18,29;UBERON:0001893,2.42e-18,29;UBERON:0003056,3.60e-18,49;UBERON:0010314,2.06e-14,92;UBERON:0002420,4.23e-13,8;UBERON:0007245,4.23e-13,8;UBERON:0010009,4.23e-13,8;UBERON:0010011,4.23e-13,8;UBERON:0000454,4.23e-13,8;UBERON:0002240,4.01e-11,6;UBERON:0005174,4.01e-11,6;UBERON:0001137,4.01e-11,6;UBERON:0001948,1.63e-09,5;UBERON:0002315,1.63e-09,5;UBERON:0003076,4.41e-09,12;UBERON:0003057,4.41e-09,12;UBERON:0000956,1.29e-08,21;UBERON:0001869,1.29e-08,21;UBERON:0000203,1.29e-08,21;UBERON:0000025,2.43e-08,114;UBERON:0002950,2.72e-08,4;UBERON:0001891,2.72e-08,4;UBERON:0009616,2.72e-08,4;UBERON:0010286,2.72e-08,4;UBERON:0000369,5.15e-08,5;UBERON:0002435,5.15e-08,5;UBERON:0000204,5.15e-08,5;UBERON:0010082,5.15e-08,5;UBERON:0002619,1.16e-07,17;UBERON:0004111,2.92e-07,122;UBERON:0002021,4.50e-07,10;UBERON:0000411,4.50e-07,10;UBERON:0001950,4.50e-07,10;UBERON:0004684,9.38e-07,3;UBERON:0002275,9.38e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0.563154888606667,0.468129052643987,0.171217968225505,0,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0.55994568650145,0,0,0,0.336093799142464,0,0,0,3.03474691289397,6.34789175126439,3.1691570175309,0,0,0,0,0,0.299600110518405,0.384218305321555,0.933206510776299,1.89008313664367,0.630974884054146,6.85562362569129,8.39300455616131,0.734944795289724,1.0543001812006,0,4.40463523997555,9.70423769447427,10.4452442614246,3.29715719325485,2.65314166446988,1.56274011167028,5.862842979029,6.75315132038016,10.0846843532695,5.89257170947335,5.26775218956681,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.649473123033642,1.52015919285059,2.02209778005913,0,0,0,0.173485326766136,0.304465478312141,0,0,0.352766121407114,0,0,0.433798070759735,0,0,0,0,0,0,0,0.255457055208591,0,0,0,4.79330046095433,2.28750301409313,1.00523481690292,1.73824320192276,1.27857728665165,8.51930982694196,4.2182728397617,0,0.373220911830279,0,0.631325567659422,0.910843100738926,1.14951052216736,0.180062129805349,0.60281927134286,0.476255494059295,0.896796041993948,0.0937017245597288,1.81092359517311,0.215567992932842,0.189106080167819,0.703804496655795,0.657587197282725,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.540186184383045,0.23674473558521,0.590292695242212,0.617068451549513,0.465067889500816,0.804820204198858,0.350296027101508,0.329119699826961,0,0.0810688095458557,0,0,0,3.36463917702604,2.77842453424068,0,0,0,0.232236671860439,0.515469845288373,1.21010114774006,0.444756087689741,1.14135375667535,0,0,0.251335208800269,0.39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| ||
|EntrezGene=14168 | |||
|HGNC= | |||
|MCL_coexpression_id=159 | |||
|UniProt=Q8VCY9 | |||
|association_with_transcript=43bp_to_ENSMUST00000033473,NM_010200,uc009tht.1_5end | |||
|description=CAGE_peak_11_at_Fgf13_5end | |||
|id=chrX:56387556..56387569,- | |||
|ontology_enrichment_celltype=CL:0000117!4.78e-14!23;CL:0000337!4.78e-14!23;CL:0000540!3.49e-08!33;CL:0000047!3.49e-08!33;CL:0000031!3.49e-08!33;CL:0000404!3.49e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.79e-25,23;CL:0000337,7.79e-25,23;CL:0000540,1.27e-15,33;CL:0000047,1.27e-15,33;CL:0000031,1.27e-15,33;CL:0000404,1.27e-15,33;CL:0000393,2.15e-12,39;CL:0000211,2.15e-12,39;CL:0002319,9.40e-11,43;CL:0000221,2.16e-10,44;CL:0000133,2.16e-10,44;CL:0002610,9.38e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.65e-32,54;UBERON:0001049,9.12e-29,52;UBERON:0005068,9.12e-29,52;UBERON:0006241,9.12e-29,52;UBERON:0007135,9.12e-29,52;UBERON:0001017,4.23e-28,73;UBERON:0001016,4.53e-27,75;UBERON:0002020,1.08e-25,34;UBERON:0002346,7.78e-25,64;UBERON:0003075,7.78e-25,64;UBERON:0007284,7.78e-25,64;UBERON:0004121,9.83e-22,95;UBERON:0000924,9.83e-22,95;UBERON:0006601,9.83e-22,95;UBERON:0010371,1.34e-20,73;UBERON:0002616,2.14e-20,46;UBERON:0003080,3.65e-20,40;UBERON:0000955,8.39e-20,47;UBERON:0006238,8.39e-20,47;UBERON:0002780,7.92e-19,39;UBERON:0001890,7.92e-19,39;UBERON:0006240,7.92e-19,39;UBERON:0003528,2.42e-18,29;UBERON:0002791,2.42e-18,29;UBERON:0001893,2.42e-18,29;UBERON:0003056,3.60e-18,49;UBERON:0010314,2.06e-14,92;UBERON:0002420,4.23e-13,8;UBERON:0007245,4.23e-13,8;UBERON:0010009,4.23e-13,8;UBERON:0010011,4.23e-13,8;UBERON:0000454,4.23e-13,8;UBERON:0002240,4.01e-11,6;UBERON:0005174,4.01e-11,6;UBERON:0001137,4.01e-11,6;UBERON:0001948,1.63e-09,5;UBERON:0002315,1.63e-09,5;UBERON:0003076,4.41e-09,12;UBERON:0003057,4.41e-09,12;UBERON:0000956,1.29e-08,21;UBERON:0001869,1.29e-08,21;UBERON:0000203,1.29e-08,21;UBERON:0000025,2.43e-08,114;UBERON:0002950,2.72e-08,4;UBERON:0001891,2.72e-08,4;UBERON:0009616,2.72e-08,4;UBERON:0010286,2.72e-08,4;UBERON:0000369,5.15e-08,5;UBERON:0002435,5.15e-08,5;UBERON:0000204,5.15e-08,5;UBERON:0010082,5.15e-08,5;UBERON:0002619,1.16e-07,17;UBERON:0004111,2.92e-07,122;UBERON:0002021,4.50e-07,10;UBERON:0000411,4.50e-07,10;UBERON:0001950,4.50e-07,10;UBERON:0004684,9.38e-07,3;UBERON:0002275,9.38e-07,3 | |||
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|short_description=p11@Fgf13 | |||
}} |
Revision as of 19:57, 14 September 2013
Short description: | p11@Fgf13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Fgf13_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | 43bp_to_ENSMUST00000033473, NM_010200, uc009tht.1_5end |
EntrezGene: | Fgf13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.79e-25 | 23 |
neuroblast (sensu Vertebrata) | 7.79e-25 | 23 |
neuron | 1.27e-15 | 33 |
neuronal stem cell | 1.27e-15 | 33 |
neuroblast | 1.27e-15 | 33 |
electrically signaling cell | 1.27e-15 | 33 |
electrically responsive cell | 2.15e-12 | 39 |
electrically active cell | 2.15e-12 | 39 |
neural cell | 9.40e-11 | 43 |
ectodermal cell | 2.16e-10 | 44 |
neurectodermal cell | 2.16e-10 | 44 |
raphe nuclei neuron | 9.38e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.