FFCP PHASE1:Mm9::chrX:7497036..7497046,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=30052|HGNC=|MCL_coexpression_id=556|UniProt=E9Q3F0|association_with_transcript=15bp_to_ENSMUST00000163198_5end|description=CAGE_peak_2_at_Pcsk1n_5end|id=chrX:7497036..7497046,+|ontology_enrichment_celltype=CL:0000540!1.59e-18!33;CL:0000047!1.59e-18!33;CL:0000031!1.59e-18!33;CL:0000404!1.59e-18!33;CL:0000221!8.22e-17!44;CL:0000133!8.22e-17!44;CL:0002319!8.88e-17!43;CL:0000117!4.54e-16!23;CL:0000337!4.54e-16!23;CL:0000393!1.25e-13!39;CL:0000211!1.25e-13!39;CL:0000055!2.18e-12!50|ontology_enrichment_celltype_v019_2=CL:0000117,7.52e-24,23;CL:0000337,7.52e-24,23;CL:0000540,4.90e-17,33;CL:0000047,4.90e-17,33;CL:0000031,4.90e-17,33;CL:0000404,4.90e-17,33;CL:0002319,5.68e-15,43;CL:0000221,1.63e-14,44;CL:0000133,1.63e-14,44;CL:0000393,1.09e-13,39;CL:0000211,1.09e-13,39;CL:0002614,5.53e-08,3;CL:0002321,2.81e-07,70;CL:0002612,2.93e-07,3;CL:0002610,3.89e-07,3;CL:0002613,6.81e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.51e-40!75;UBERON:0001016!2.51e-40!75;UBERON:0001017!4.06e-40!73;UBERON:0005743!4.06e-40!73;UBERON:0004121!1.89e-36!102;UBERON:0000924!1.89e-36!102;UBERON:0006601!1.89e-36!102;UBERON:0002346!3.20e-35!71;UBERON:0003075!3.20e-35!71;UBERON:0007284!3.20e-35!71;UBERON:0001049!7.97e-31!52;UBERON:0005068!7.97e-31!52;UBERON:0006241!7.97e-31!52;UBERON:0007135!7.97e-31!52;UBERON:0000955!1.07e-28!50;UBERON:0006238!1.07e-28!50;UBERON:0002616!6.43e-28!49;UBERON:0000033!4.03e-27!63;UBERON:0003080!2.17e-23!40;UBERON:0003056!7.49e-23!49;UBERON:0002780!1.72e-22!39;UBERON:0001890!1.72e-22!39;UBERON:0006240!1.72e-22!39;UBERON:0002020!1.60e-20!34;UBERON:0002791!2.91e-16!29;UBERON:0003528!2.91e-16!29;UBERON:0001893!2.91e-16!29;UBERON:0007811!5.83e-14!86;UBERON:0000153!4.41e-11!94;UBERON:0000956!3.15e-10!21;UBERON:0001869!3.15e-10!21;UBERON:0000203!3.15e-10!21;UBERON:0002619!1.70e-09!17;UBERON:0002021!4.67e-08!10;UBERON:0000411!4.67e-08!10;UBERON:0001950!4.67e-08!10;UBERON:0003076!9.11e-08!12;UBERON:0003057!9.11e-08!12;UBERON:0002420!1.44e-07!8;UBERON:0007245!1.44e-07!8;UBERON:0010009!1.44e-07!8;UBERON:0010011!1.44e-07!8;UBERON:0000454!1.44e-07!8;UBERON:0001894!3.73e-07!10;UBERON:0006222!3.73e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.96e-44,73;UBERON:0001016,1.30e-42,75;UBERON:0000073,8.96e-40,54;UBERON:0001049,2.57e-36,52;UBERON:0005068,2.57e-36,52;UBERON:0006241,2.57e-36,52;UBERON:0007135,2.57e-36,52;UBERON:0004121,1.07e-31,95;UBERON:0000924,1.07e-31,95;UBERON:0006601,1.07e-31,95;UBERON:0002020,1.19e-31,34;UBERON:0002346,8.08e-30,64;UBERON:0003075,8.08e-30,64;UBERON:0007284,8.08e-30,64;UBERON:0000955,2.63e-27,47;UBERON:0006238,2.63e-27,47;UBERON:0002616,7.29e-26,46;UBERON:0003080,1.10e-25,40;UBERON:0010371,4.06e-25,73;UBERON:0002780,5.58e-24,39;UBERON:0001890,5.58e-24,39;UBERON:0006240,5.58e-24,39;UBERON:0003528,1.33e-22,29;UBERON:0002791,1.33e-22,29;UBERON:0001893,1.33e-22,29;UBERON:0003056,8.69e-20,49;UBERON:0010314,3.22e-18,92;UBERON:0002021,6.18e-17,10;UBERON:0000411,6.18e-17,10;UBERON:0001950,6.18e-17,10;UBERON:0002619,2.60e-13,17;UBERON:0002240,2.72e-13,6;UBERON:0005174,2.72e-13,6;UBERON:0001137,2.72e-13,6;UBERON:0002420,9.62e-13,8;UBERON:0007245,9.62e-13,8;UBERON:0010009,9.62e-13,8;UBERON:0010011,9.62e-13,8;UBERON:0000454,9.62e-13,8;UBERON:0000956,3.31e-12,21;UBERON:0001869,3.31e-12,21;UBERON:0000203,3.31e-12,21;UBERON:0000025,3.73e-12,114;UBERON:0001948,2.88e-11,5;UBERON:0002315,2.88e-11,5;UBERON:0004111,7.78e-11,122;UBERON:0003076,9.51e-11,12;UBERON:0003057,9.51e-11,12;UBERON:0011216,1.05e-10,194;UBERON:0002950,5.79e-10,4;UBERON:0001891,5.79e-10,4;UBERON:0009616,5.79e-10,4;UBERON:0010286,5.79e-10,4;UBERON:0002038,5.53e-08,3;UBERON:0009663,5.53e-08,3;UBERON:0009661,5.53e-08,3;UBERON:0000125,5.53e-08,3;UBERON:0002308,5.53e-08,3;UBERON:0002257,2.93e-07,3;UBERON:0004684,3.89e-07,3;UBERON:0002275,3.89e-07,3|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,3.84401275633236,1.05798195854407,6.97214543856797,0,0,0,0,0,1.19840044207362,2.68952813725088,0.207379224616955,0.135005938331691,0.210324961351382,9.71213346972932,5.30084498283872,0.489963196859816,0.479227355091182,0.919218786610021,4.40463523997555,5.36286819957788,5.06901559745603,5.40733779693795,4.11694396210843,3.12548022334056,10.6089539620525,14.069065250792,8.86229837105499,5.89257170947335,5.26775218956681,4.47358669980721,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.867426633830679,0.608930956624282,0.230615497256059,0.753613202763113,0.470354828542819,0.251333182659351,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,5.54225365797844,2.28750301409313,0.753926112677186,2.43354048269187,1.79000820131231,6.64921742590592,2.43361894601636,0,0,0,0.210441855886474,0.130120442962704,0.2299021044334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| ||
|EntrezGene=30052 | |||
|HGNC= | |||
|MCL_coexpression_id=556 | |||
|UniProt=E9Q3F0 | |||
|association_with_transcript=15bp_to_ENSMUST00000163198_5end | |||
|description=CAGE_peak_2_at_Pcsk1n_5end | |||
|id=chrX:7497036..7497046,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.59e-18!33;CL:0000047!1.59e-18!33;CL:0000031!1.59e-18!33;CL:0000404!1.59e-18!33;CL:0000221!8.22e-17!44;CL:0000133!8.22e-17!44;CL:0002319!8.88e-17!43;CL:0000117!4.54e-16!23;CL:0000337!4.54e-16!23;CL:0000393!1.25e-13!39;CL:0000211!1.25e-13!39;CL:0000055!2.18e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.52e-24,23;CL:0000337,7.52e-24,23;CL:0000540,4.90e-17,33;CL:0000047,4.90e-17,33;CL:0000031,4.90e-17,33;CL:0000404,4.90e-17,33;CL:0002319,5.68e-15,43;CL:0000221,1.63e-14,44;CL:0000133,1.63e-14,44;CL:0000393,1.09e-13,39;CL:0000211,1.09e-13,39;CL:0002614,5.53e-08,3;CL:0002321,2.81e-07,70;CL:0002612,2.93e-07,3;CL:0002610,3.89e-07,3;CL:0002613,6.81e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.51e-40!75;UBERON:0001016!2.51e-40!75;UBERON:0001017!4.06e-40!73;UBERON:0005743!4.06e-40!73;UBERON:0004121!1.89e-36!102;UBERON:0000924!1.89e-36!102;UBERON:0006601!1.89e-36!102;UBERON:0002346!3.20e-35!71;UBERON:0003075!3.20e-35!71;UBERON:0007284!3.20e-35!71;UBERON:0001049!7.97e-31!52;UBERON:0005068!7.97e-31!52;UBERON:0006241!7.97e-31!52;UBERON:0007135!7.97e-31!52;UBERON:0000955!1.07e-28!50;UBERON:0006238!1.07e-28!50;UBERON:0002616!6.43e-28!49;UBERON:0000033!4.03e-27!63;UBERON:0003080!2.17e-23!40;UBERON:0003056!7.49e-23!49;UBERON:0002780!1.72e-22!39;UBERON:0001890!1.72e-22!39;UBERON:0006240!1.72e-22!39;UBERON:0002020!1.60e-20!34;UBERON:0002791!2.91e-16!29;UBERON:0003528!2.91e-16!29;UBERON:0001893!2.91e-16!29;UBERON:0007811!5.83e-14!86;UBERON:0000153!4.41e-11!94;UBERON:0000956!3.15e-10!21;UBERON:0001869!3.15e-10!21;UBERON:0000203!3.15e-10!21;UBERON:0002619!1.70e-09!17;UBERON:0002021!4.67e-08!10;UBERON:0000411!4.67e-08!10;UBERON:0001950!4.67e-08!10;UBERON:0003076!9.11e-08!12;UBERON:0003057!9.11e-08!12;UBERON:0002420!1.44e-07!8;UBERON:0007245!1.44e-07!8;UBERON:0010009!1.44e-07!8;UBERON:0010011!1.44e-07!8;UBERON:0000454!1.44e-07!8;UBERON:0001894!3.73e-07!10;UBERON:0006222!3.73e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.96e-44,73;UBERON:0001016,1.30e-42,75;UBERON:0000073,8.96e-40,54;UBERON:0001049,2.57e-36,52;UBERON:0005068,2.57e-36,52;UBERON:0006241,2.57e-36,52;UBERON:0007135,2.57e-36,52;UBERON:0004121,1.07e-31,95;UBERON:0000924,1.07e-31,95;UBERON:0006601,1.07e-31,95;UBERON:0002020,1.19e-31,34;UBERON:0002346,8.08e-30,64;UBERON:0003075,8.08e-30,64;UBERON:0007284,8.08e-30,64;UBERON:0000955,2.63e-27,47;UBERON:0006238,2.63e-27,47;UBERON:0002616,7.29e-26,46;UBERON:0003080,1.10e-25,40;UBERON:0010371,4.06e-25,73;UBERON:0002780,5.58e-24,39;UBERON:0001890,5.58e-24,39;UBERON:0006240,5.58e-24,39;UBERON:0003528,1.33e-22,29;UBERON:0002791,1.33e-22,29;UBERON:0001893,1.33e-22,29;UBERON:0003056,8.69e-20,49;UBERON:0010314,3.22e-18,92;UBERON:0002021,6.18e-17,10;UBERON:0000411,6.18e-17,10;UBERON:0001950,6.18e-17,10;UBERON:0002619,2.60e-13,17;UBERON:0002240,2.72e-13,6;UBERON:0005174,2.72e-13,6;UBERON:0001137,2.72e-13,6;UBERON:0002420,9.62e-13,8;UBERON:0007245,9.62e-13,8;UBERON:0010009,9.62e-13,8;UBERON:0010011,9.62e-13,8;UBERON:0000454,9.62e-13,8;UBERON:0000956,3.31e-12,21;UBERON:0001869,3.31e-12,21;UBERON:0000203,3.31e-12,21;UBERON:0000025,3.73e-12,114;UBERON:0001948,2.88e-11,5;UBERON:0002315,2.88e-11,5;UBERON:0004111,7.78e-11,122;UBERON:0003076,9.51e-11,12;UBERON:0003057,9.51e-11,12;UBERON:0011216,1.05e-10,194;UBERON:0002950,5.79e-10,4;UBERON:0001891,5.79e-10,4;UBERON:0009616,5.79e-10,4;UBERON:0010286,5.79e-10,4;UBERON:0002038,5.53e-08,3;UBERON:0009663,5.53e-08,3;UBERON:0009661,5.53e-08,3;UBERON:0000125,5.53e-08,3;UBERON:0002308,5.53e-08,3;UBERON:0002257,2.93e-07,3;UBERON:0004684,3.89e-07,3;UBERON:0002275,3.89e-07,3 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,3.84401275633236,1.05798195854407,6.97214543856797,0,0,0,0,0,1.19840044207362,2.68952813725088,0.207379224616955,0.135005938331691,0.210324961351382,9.71213346972932,5.30084498283872,0.489963196859816,0.479227355091182,0.919218786610021,4.40463523997555,5.36286819957788,5.06901559745603,5.40733779693795,4.11694396210843,3.12548022334056,10.6089539620525,14.069065250792,8.86229837105499,5.89257170947335,5.26775218956681,4.47358669980721,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.867426633830679,0.608930956624282,0.230615497256059,0.753613202763113,0.470354828542819,0.251333182659351,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,5.54225365797844,2.28750301409313,0.753926112677186,2.43354048269187,1.79000820131231,6.64921742590592,2.43361894601636,0,0,0,0.210441855886474,0.130120442962704,0.229902104433473,0.180062129805349,0,0.408218994907967,0.640568601424249,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,1.3377599609307,0,0.264450566663544,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.342745537829186,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49541651965817,4.80567915028033,0,0,1.26203287766503,0.780877488593277,0.430846795465598,0.238968797952552,0.445597348164788,0.283076530788832,0.809621403349789,0.876767573733936,0,2.57057053137446,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,5.44703369206061,0.900305470156551,0.646793418913773,0.428674070063185,0.886701168211368,0.713475270408282,0.658196082408484,4.26250928760439,0,0.21183207086382,0.441056796109924,0,0,0,0,0,0,6.48988557036784,0.170870880797853,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.717710852875806,0,0.386379188064381,0,0,0,0,1.6942555278512,2.76195141904306,3.43737308063638,3.78077001156113,1.37016503954128,2.2661816921691,4.72515750162264,1.35096360967266,1.35942722695261,2.07104124700728,0,0,0.853668028770671,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0.64183841918363,0,0,0.188626341386076,0.468207537349412,0.0640251524048693,0.34461281373368,0,0.463537303779422,0.38581844092741,0,0.441596760403192,0,0.532427418478012,0.476872379894642,0.145346416632329,0.0941093804153306,0.169229215783353,0.73171189149109,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,0.492522411877817,0,0,0,1.49886346762768,0.467863216890817,0.644613162144895,0.191288332068843,0.661774257358546,0 | |||
|short_description=p2@Pcsk1n | |||
}} |
Revision as of 20:10, 14 September 2013
Short description: | p2@Pcsk1n |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pcsk1n_5end |
Coexpression cluster: | MCL_coexpression_mm9:556 |
Association with transcript: | 15bp_to_ENSMUST00000163198_5end |
EntrezGene: | Pcsk1n |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.52e-24 | 23 |
neuroblast (sensu Vertebrata) | 7.52e-24 | 23 |
neuron | 4.90e-17 | 33 |
neuronal stem cell | 4.90e-17 | 33 |
neuroblast | 4.90e-17 | 33 |
electrically signaling cell | 4.90e-17 | 33 |
neural cell | 5.68e-15 | 43 |
ectodermal cell | 1.63e-14 | 44 |
neurectodermal cell | 1.63e-14 | 44 |
electrically responsive cell | 1.09e-13 | 39 |
electrically active cell | 1.09e-13 | 39 |
neuron of the substantia nigra | 5.53e-08 | 3 |
embryonic cell | 2.81e-07 | 70 |
neuron of the ventral spinal cord | 2.93e-07 | 3 |
raphe nuclei neuron | 3.89e-07 | 3 |
striatum neuron | 6.81e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.