FFCP PHASE1:Mm9::chrX:98579120..98579141,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14618|HGNC=|MCL_coexpression_id=270|UniProt=P28230|association_with_transcript=45bp_to_ENSMUST00000119190_5end|description=CAGE_peak_6_at_Gjb1_5end|id=chrX:98579120..98579141,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,2.49e-12,23;CL:0000337,2.49e-12,23;CL:0000221,1.88e-11,44;CL:0000133,1.88e-11,44;CL:0002614,6.18e-11,3;CL:0002610,1.20e-10,3;CL:0002319,4.54e-10,43;CL:0000540,4.90e-08,33;CL:0000047,4.90e-08,33;CL:0000031,4.90e-08,33;CL:0000404,4.90e-08,33;CL:0000217,1.45e-07,2;CL:0000328,1.45e-07,2;CL:0002573,1.45e-07,2;CL:0002376,1.45e-07,2;CL:0000218,1.45e-07,2;CL:0000692,1.45e-07,2;CL:0002377,1.45e-07,2;CL:0002375,1.45e-07,2;CL:0002611,2.25e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.56e-23!102;UBERON:0000924!5.56e-23!102;UBERON:0006601!5.56e-23!102;UBERON:0000073!2.73e-19!75;UBERON:0001016!2.73e-19!75;UBERON:0000033!3.14e-19!63;UBERON:0001017!3.17e-17!73;UBERON:0005743!3.17e-17!73;UBERON:0001049!8.70e-17!52;UBERON:0005068!8.70e-17!52;UBERON:0006241!8.70e-17!52;UBERON:0007135!8.70e-17!52;UBERON:0002346!1.05e-15!71;UBERON:0003075!1.05e-15!71;UBERON:0007284!1.05e-15!71;UBERON:0000955!4.42e-15!50;UBERON:0006238!4.42e-15!50;UBERON:0002616!3.46e-14!49;UBERON:0003076!8.17e-14!12;UBERON:0003057!8.17e-14!12;UBERON:0002020!5.16e-12!34;UBERON:0007811!2.48e-11!86;UBERON:0002298!4.53e-10!6;UBERON:0000153!1.54e-09!94;UBERON:0003056!3.88e-09!49;UBERON:0002240!9.26e-09!6;UBERON:0005174!9.26e-09!6;UBERON:0001137!9.26e-09!6;UBERON:0002021!8.45e-08!10;UBERON:0000411!8.45e-08!10;UBERON:0001950!8.45e-08!10;UBERON:0002791!1.20e-07!29;UBERON:0003528!1.20e-07!29;UBERON:0001893!1.20e-07!29;UBERON:0003080!2.44e-07!40;UBERON:0001948!2.76e-07!5;UBERON:0002315!2.76e-07!5;UBERON:0002950!3.76e-07!4;UBERON:0001891!3.76e-07!4;UBERON:0009616!3.76e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.47e-29,54;UBERON:0001016,5.61e-26,75;UBERON:0001049,1.05e-24,52;UBERON:0005068,1.05e-24,52;UBERON:0006241,1.05e-24,52;UBERON:0007135,1.05e-24,52;UBERON:0003076,1.55e-24,12;UBERON:0003057,1.55e-24,12;UBERON:0001017,2.62e-22,73;UBERON:0004121,3.01e-21,95;UBERON:0000924,3.01e-21,95;UBERON:0006601,3.01e-21,95;UBERON:0002346,3.00e-19,64;UBERON:0003075,3.00e-19,64;UBERON:0007284,3.00e-19,64;UBERON:0010371,4.13e-18,73;UBERON:0002616,4.71e-16,46;UBERON:0000955,1.23e-15,47;UBERON:0006238,1.23e-15,47;UBERON:0002950,1.27e-13,4;UBERON:0001891,1.27e-13,4;UBERON:0009616,1.27e-13,4;UBERON:0010286,1.27e-13,4;UBERON:0010314,1.99e-13,92;UBERON:0004733,4.30e-13,6;UBERON:0004732,4.30e-13,6;UBERON:0002028,4.30e-13,6;UBERON:0007277,4.30e-13,6;UBERON:0002240,6.47e-13,6;UBERON:0005174,6.47e-13,6;UBERON:0001137,6.47e-13,6;UBERON:0002020,1.30e-12,34;UBERON:0002038,6.18e-11,3;UBERON:0009663,6.18e-11,3;UBERON:0009661,6.18e-11,3;UBERON:0000125,6.18e-11,3;UBERON:0002308,6.18e-11,3;UBERON:0004684,1.20e-10,3;UBERON:0002275,1.20e-10,3;UBERON:0001948,6.58e-10,5;UBERON:0002315,6.58e-10,5;UBERON:0004111,5.41e-09,122;UBERON:0000025,7.31e-09,114;UBERON:0003080,8.59e-09,40;UBERON:0001896,6.39e-08,2;UBERON:0002298,6.39e-08,2;UBERON:0005290,6.39e-08,2;UBERON:0010096,6.39e-08,2;UBERON:0011216,8.70e-08,194;UBERON:0002780,1.54e-07,39;UBERON:0001890,1.54e-07,39;UBERON:0006240,1.54e-07,39;UBERON:0002256,2.25e-07,2;UBERON:0002037,3.08e-07,4;UBERON:0002680,3.08e-07,4;UBERON:0001895,3.08e-07,4;UBERON:0010092,3.08e-07,4;UBERON:0006215,3.08e-07,4;UBERON:0003528,4.30e-07,29;UBERON:0002791,4.30e-07,29;UBERON:0001893,4.30e-07,29;UBERON:0002420,7.02e-07,8;UBERON:0007245,7.02e-07,8;UBERON:0010009,7.02e-07,8;UBERON:0010011,7.02e-07,8;UBERON:0000454,7.02e-07,8;UBERON:0003056,9.13e-07,49|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,4.85606673486466,5.30084498283872,0,0,0,6.60695285996332,6.76742891851495,6.91229399653096,0,0,0,13.1216009530649,6.75315132038016,7.02871939773326,1.76777151284201,1.13897344639282,0.186399445825301,8.25415507331706,3.92972112555285,0,0,0,0,0,0,0.280888840263504,0,0,0,2.39433813620357,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34224637609238,3.35114730901528,0,0,0,0,3.14560342750128,4.11750542536764,0,1.21677024134594,2.04572365864264,6.02585329222724,3.73154905055843,0,0,0,0.420883711772948,0,0,0,0,0.204109497453984,0.384341160854549,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.70642831941401,8.43924143463863,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0.485561272309963,0,0.188605079755898,0.885905678642318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294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| ||
|EntrezGene=14618 | |||
|HGNC= | |||
|MCL_coexpression_id=270 | |||
|UniProt=P28230 | |||
|association_with_transcript=45bp_to_ENSMUST00000119190_5end | |||
|description=CAGE_peak_6_at_Gjb1_5end | |||
|id=chrX:98579120..98579141,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.49e-12,23;CL:0000337,2.49e-12,23;CL:0000221,1.88e-11,44;CL:0000133,1.88e-11,44;CL:0002614,6.18e-11,3;CL:0002610,1.20e-10,3;CL:0002319,4.54e-10,43;CL:0000540,4.90e-08,33;CL:0000047,4.90e-08,33;CL:0000031,4.90e-08,33;CL:0000404,4.90e-08,33;CL:0000217,1.45e-07,2;CL:0000328,1.45e-07,2;CL:0002573,1.45e-07,2;CL:0002376,1.45e-07,2;CL:0000218,1.45e-07,2;CL:0000692,1.45e-07,2;CL:0002377,1.45e-07,2;CL:0002375,1.45e-07,2;CL:0002611,2.25e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.56e-23!102;UBERON:0000924!5.56e-23!102;UBERON:0006601!5.56e-23!102;UBERON:0000073!2.73e-19!75;UBERON:0001016!2.73e-19!75;UBERON:0000033!3.14e-19!63;UBERON:0001017!3.17e-17!73;UBERON:0005743!3.17e-17!73;UBERON:0001049!8.70e-17!52;UBERON:0005068!8.70e-17!52;UBERON:0006241!8.70e-17!52;UBERON:0007135!8.70e-17!52;UBERON:0002346!1.05e-15!71;UBERON:0003075!1.05e-15!71;UBERON:0007284!1.05e-15!71;UBERON:0000955!4.42e-15!50;UBERON:0006238!4.42e-15!50;UBERON:0002616!3.46e-14!49;UBERON:0003076!8.17e-14!12;UBERON:0003057!8.17e-14!12;UBERON:0002020!5.16e-12!34;UBERON:0007811!2.48e-11!86;UBERON:0002298!4.53e-10!6;UBERON:0000153!1.54e-09!94;UBERON:0003056!3.88e-09!49;UBERON:0002240!9.26e-09!6;UBERON:0005174!9.26e-09!6;UBERON:0001137!9.26e-09!6;UBERON:0002021!8.45e-08!10;UBERON:0000411!8.45e-08!10;UBERON:0001950!8.45e-08!10;UBERON:0002791!1.20e-07!29;UBERON:0003528!1.20e-07!29;UBERON:0001893!1.20e-07!29;UBERON:0003080!2.44e-07!40;UBERON:0001948!2.76e-07!5;UBERON:0002315!2.76e-07!5;UBERON:0002950!3.76e-07!4;UBERON:0001891!3.76e-07!4;UBERON:0009616!3.76e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.47e-29,54;UBERON:0001016,5.61e-26,75;UBERON:0001049,1.05e-24,52;UBERON:0005068,1.05e-24,52;UBERON:0006241,1.05e-24,52;UBERON:0007135,1.05e-24,52;UBERON:0003076,1.55e-24,12;UBERON:0003057,1.55e-24,12;UBERON:0001017,2.62e-22,73;UBERON:0004121,3.01e-21,95;UBERON:0000924,3.01e-21,95;UBERON:0006601,3.01e-21,95;UBERON:0002346,3.00e-19,64;UBERON:0003075,3.00e-19,64;UBERON:0007284,3.00e-19,64;UBERON:0010371,4.13e-18,73;UBERON:0002616,4.71e-16,46;UBERON:0000955,1.23e-15,47;UBERON:0006238,1.23e-15,47;UBERON:0002950,1.27e-13,4;UBERON:0001891,1.27e-13,4;UBERON:0009616,1.27e-13,4;UBERON:0010286,1.27e-13,4;UBERON:0010314,1.99e-13,92;UBERON:0004733,4.30e-13,6;UBERON:0004732,4.30e-13,6;UBERON:0002028,4.30e-13,6;UBERON:0007277,4.30e-13,6;UBERON:0002240,6.47e-13,6;UBERON:0005174,6.47e-13,6;UBERON:0001137,6.47e-13,6;UBERON:0002020,1.30e-12,34;UBERON:0002038,6.18e-11,3;UBERON:0009663,6.18e-11,3;UBERON:0009661,6.18e-11,3;UBERON:0000125,6.18e-11,3;UBERON:0002308,6.18e-11,3;UBERON:0004684,1.20e-10,3;UBERON:0002275,1.20e-10,3;UBERON:0001948,6.58e-10,5;UBERON:0002315,6.58e-10,5;UBERON:0004111,5.41e-09,122;UBERON:0000025,7.31e-09,114;UBERON:0003080,8.59e-09,40;UBERON:0001896,6.39e-08,2;UBERON:0002298,6.39e-08,2;UBERON:0005290,6.39e-08,2;UBERON:0010096,6.39e-08,2;UBERON:0011216,8.70e-08,194;UBERON:0002780,1.54e-07,39;UBERON:0001890,1.54e-07,39;UBERON:0006240,1.54e-07,39;UBERON:0002256,2.25e-07,2;UBERON:0002037,3.08e-07,4;UBERON:0002680,3.08e-07,4;UBERON:0001895,3.08e-07,4;UBERON:0010092,3.08e-07,4;UBERON:0006215,3.08e-07,4;UBERON:0003528,4.30e-07,29;UBERON:0002791,4.30e-07,29;UBERON:0001893,4.30e-07,29;UBERON:0002420,7.02e-07,8;UBERON:0007245,7.02e-07,8;UBERON:0010009,7.02e-07,8;UBERON:0010011,7.02e-07,8;UBERON:0000454,7.02e-07,8;UBERON:0003056,9.13e-07,49 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,4.85606673486466,5.30084498283872,0,0,0,6.60695285996332,6.76742891851495,6.91229399653096,0,0,0,13.1216009530649,6.75315132038016,7.02871939773326,1.76777151284201,1.13897344639282,0.186399445825301,8.25415507331706,3.92972112555285,0,0,0,0,0,0,0.280888840263504,0,0,0,2.39433813620357,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34224637609238,3.35114730901528,0,0,0,0,3.14560342750128,4.11750542536764,0,1.21677024134594,2.04572365864264,6.02585329222724,3.73154905055843,0,0,0,0.420883711772948,0,0,0,0,0.204109497453984,0.384341160854549,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.70642831941401,8.43924143463863,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0.485561272309963,0,0.188605079755898,0.885905678642318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0.180938774784468,0,0.328281799490123,0,11.8672193286726,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,1.6942555278512,0,0,0.68741272937475,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p6@Gjb1 | |||
}} |
Revision as of 20:20, 14 September 2013
Short description: | p6@Gjb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Gjb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:270 |
Association with transcript: | 45bp_to_ENSMUST00000119190_5end |
EntrezGene: | Gjb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.49e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.49e-12 | 23 |
ectodermal cell | 1.88e-11 | 44 |
neurectodermal cell | 1.88e-11 | 44 |
neuron of the substantia nigra | 6.18e-11 | 3 |
raphe nuclei neuron | 1.20e-10 | 3 |
neural cell | 4.54e-10 | 43 |
neuron | 4.90e-08 | 33 |
neuronal stem cell | 4.90e-08 | 33 |
neuroblast | 4.90e-08 | 33 |
electrically signaling cell | 4.90e-08 | 33 |
insulating cell | 1.45e-07 | 2 |
myelin accumulating cell | 1.45e-07 | 2 |
Schwann cell | 1.45e-07 | 2 |
non-myelinating Schwann cell | 1.45e-07 | 2 |
myelinating Schwann cell;;Schwann cell | 1.45e-07 | 2 |
terminal Schwann cell | 1.45e-07 | 2 |
immature Schwann cell | 1.45e-07 | 2 |
Schwann cell precursor | 1.45e-07 | 2 |
neuron of the dorsal spinal cord | 2.25e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.