FFCP PHASE1:Hg19::chr14:33403930..33403943,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64067 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19311 | |||
|TSSclassifier=weak | |||
|UniProt=F8VR32,F8VS42 | |||
|association_with_transcript=-195bp_to_ENST00000551492,ENST00000551634_5end | |||
|coexpression_cluster_id=C1030 | |||
|description=CAGE_peak_7_at_NPAS3_5end | |||
|id=chr14:33403930..33403943,+ | |||
|ontology_enrichment_celltype=CL:0002319!4.99e-12!25;CL:0000128!1.43e-08!7;CL:0000126!1.43e-08!7;CL:0000127!1.43e-08!7;CL:0002453!1.43e-08!7;CL:0000133!6.89e-08!59;CL:0000047!2.11e-07!8;CL:0002605!4.83e-07!3;CL:0000095!9.08e-07!17;CL:0000123!9.08e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0002605;7.20e-12;3!CL:0000047;6.40e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,7.10e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.81e-16;82!UBERON:0006241;5.96e-11;3!UBERON:0003057;5.96e-11;3!UBERON:0010122;9.64e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.06e-77!82;UBERON:0005743!7.67e-75!86;UBERON:0001049!2.89e-72!57;UBERON:0005068!2.89e-72!57;UBERON:0006241!2.89e-72!57;UBERON:0007135!2.89e-72!57;UBERON:0000073!5.15e-68!94;UBERON:0001016!5.15e-68!94;UBERON:0000955!3.44e-65!69;UBERON:0006238!3.44e-65!69;UBERON:0002616!3.85e-60!59;UBERON:0002780!2.14e-56!41;UBERON:0001890!2.14e-56!41;UBERON:0006240!2.14e-56!41;UBERON:0003075!7.64e-56!86;UBERON:0007284!7.64e-56!86;UBERON:0002020!9.20e-56!34;UBERON:0003528!9.20e-56!34;UBERON:0001893!1.06e-55!34;UBERON:0003080!9.08e-55!42;UBERON:0002346!1.32e-54!90;UBERON:0002791!5.00e-54!33;UBERON:0001869!2.08e-52!32;UBERON:0003056!1.16e-43!61;UBERON:0004121!1.23e-41!169;UBERON:0000924!1.59e-41!173;UBERON:0006601!1.59e-41!173;UBERON:0000956!8.60e-41!25;UBERON:0000203!8.60e-41!25;UBERON:0000033!1.78e-40!123;UBERON:0000153!3.93e-39!129;UBERON:0007811!3.93e-39!129;UBERON:0002619!2.44e-35!22;UBERON:0001950!7.17e-32!20;UBERON:0007023!2.43e-28!115;UBERON:0003076!8.85e-18!15;UBERON:0003057!8.85e-18!15;UBERON:0002308!4.10e-16!9;UBERON:0000125!4.10e-16!9;UBERON:0002420!4.72e-16!9;UBERON:0007245!4.72e-16!9;UBERON:0010009!4.72e-16!9;UBERON:0010011!4.72e-16!9;UBERON:0000454!4.72e-16!9;UBERON:0000025!1.43e-13!194;UBERON:0004733!4.07e-13!12;UBERON:0002028!4.07e-13!12;UBERON:0007277!4.07e-13!12;UBERON:0000064!4.78e-13!219;UBERON:0009663!9.08e-13!7;UBERON:0004732!6.47e-12!13;UBERON:0000477!9.85e-12!286;UBERON:0000200!2.37e-11!6;UBERON:0004111!2.44e-11!241;UBERON:0001871!3.74e-11!7;UBERON:0000483!3.85e-11!309;UBERON:0000119!7.42e-11!312;UBERON:0002298!8.71e-11!8;UBERON:0000475!2.31e-10!365;UBERON:0000349!4.38e-10!5;UBERON:0002021!7.38e-10!5;UBERON:0001872!1.79e-09!5;UBERON:0002680!9.76e-09!9;UBERON:0001895!9.76e-09!9;UBERON:0010092!9.76e-09!9;UBERON:0000369!2.40e-08!4;UBERON:0002435!2.40e-08!4;UBERON:0000204!2.40e-08!4;UBERON:0010082!2.40e-08!4;UBERON:0000062!4.48e-08!511;UBERON:0000922!7.69e-07!612;UBERON:0002050!8.59e-07!605;UBERON:0005423!8.59e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.72e-83;34!UBERON:0003528;1.86e-83;34!UBERON:0002020;1.86e-83;34!UBERON:0001869;4.46e-83;32!UBERON:0002791;6.23e-83;32!UBERON:0000956;2.09e-70;25!UBERON:0000203;2.09e-70;25!UBERON:0002780;5.46e-68;41!UBERON:0001890;5.46e-68;41!UBERON:0002619;3.66e-60;22!UBERON:0000073;4.67e-60;53!UBERON:0002616;4.67e-60;53!UBERON:0001950;9.59e-54;20!UBERON:0001017;1.76e-40;75!UBERON:0000955;1.91e-39;68!UBERON:0001016;5.16e-34;83!UBERON:0000125;1.50e-28;9!UBERON:0002308;1.50e-28;9!UBERON:0002420;1.96e-28;9!UBERON:0007245;1.96e-28;9!UBERON:0010009;1.96e-28;9!UBERON:0010011;1.96e-28;9!UBERON:0000454;1.96e-28;9!UBERON:0009663;2.15e-22;7!UBERON:0002298;1.50e-19;6!UBERON:0002021;2.01e-17;5!UBERON:0000349;3.35e-17;5!UBERON:0001872;1.78e-16;5!UBERON:0004733;2.88e-16;12!UBERON:0002028;2.88e-16;12!UBERON:0004732;6.53e-15;13!UBERON:0000200;2.26e-14;6!UBERON:0000369;3.97e-14;4!UBERON:0002435;3.97e-14;4!UBERON:0000204;3.97e-14;4!UBERON:0007023;2.87e-12;114!UBERON:0011216;4.08e-12;132!UBERON:0001871;5.72e-12;6!UBERON:0005383;4.78e-11;3!UBERON:0005382;4.78e-11;3!UBERON:0001870;5.96e-11;3!UBERON:0002240;5.96e-11;3!UBERON:0005174;5.96e-11;3!UBERON:0001137;5.96e-11;3!UBERON:0000988;1.23e-10;3!UBERON:0001896;1.23e-10;3!UBERON:0005290;1.23e-10;3!UBERON:0002680;7.49e-09;9!UBERON:0001895;7.49e-09;9!UBERON:0001954;4.53e-08;2!UBERON:0003022;4.53e-08;2!UBERON:0002421;4.53e-08;2!UBERON:0002600;4.53e-08;2!UBERON:0002148;7.34e-08;2!UBERON:0006331;7.34e-08;2!UBERON:0009662;7.34e-08;2!UBERON:0002702;7.47e-08;2!UBERON:0001876;9.64e-08;2!UBERON:0001873;9.64e-08;2!UBERON:0010314;1.55e-07;132!UBERON:0001875;3.18e-07;2!UBERON:0006514;3.18e-07;2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,5.15224776835902,4.65373045247806,3.51519390865448,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.221729397462564,0.263504357079378,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35236560556159,1.30139853857622,1.54657762555539,1.00509759200609,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0.182091168006717,0.393373244878272,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.485442086998054,0,0,0,0.296964680832639,0,1.9882952955326,3.65740482667333,0,0,4.85588438694385,0,0,3.02319297425131,0.102268682502155,0,0,0,0,0,0,0,0,3.87733098438087,1.39152147242777,1.99613798001194,0,0,0,0,0,0,0,0.291604613383254,0,1.77148277162768,3.73848959738765,1.52581736317083,1.76926815889959,0,0.658156191461918,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,2.89824871816911,0,1.40558667435203,0,0,0,0,0,1.53036380815245,0,0,0.103688191397247,0,0,0,0,0,0,1.04135843001079,0,0,0,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,2.15256706249988,0,0,0,0,0,0,3.94668495082519,0,0.124252535565433,0,0.271808412147228,0.418411385249333,0.509991088181609,0,1.20084057741958,1.77976992559591,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,2.38568906942791,3.94989877723569,0.160753148465019,0,0,0,0,2.36923270966296,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.566560457600628,0,0,2.97350799631566,2.38018683136842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.976210119215705,4.50687350543399,1.14681839138014,2.10765197920019,2.79433813236226,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45646090379327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.509197589862076,0,0,0,0,0,0,0,0.6124909547064,2.95454435443714,1.41696576325585,4.15048033548593,4.1023272848151,2.26864526599546,2.07471757392654,1.77623210195036,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,2.22874029240702,1.56215619722769,2.27355476151302,2.34638497717455,1.09394961803644,0,0,0,0,0,0.672567444437648,0,0,0,0,0,1.15548546060614,2.56513816895111,0,0.111231401892069,0,3.29942738823604,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0.430227358820278,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0.971421986118279,0,0,0,0.11294608203896,0,0,0,0,0,0,0,2.1593931382644,1.48523200163543,4.226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,1.43339583151451,1.41994405973866,2.3117106664911,2.18175345170189,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0.829169439458779,2.58582489654738,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0.733448665097199,0.813792356631477,0,0,0 | |||
|short_description=p7@NPAS3 | |||
}} |
Revision as of 19:38, 11 January 2014
Short description: | p7@NPAS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NPAS3_5end |
Coexpression cluster: | C1030_Astrocyte_anaplastic_Neural_parietal_hippocampus_occipital_spinal |
Association with transcript: | -195bp_to_ENST00000551492, ENST00000551634_5end |
EntrezGene: | NPAS3 |
HGNC: | 19311 |
UniProt: | F8VR32F8VS42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 7.10e-12 | 3 |