FFCP PHASE1:Hg19::chr14:51562745..51562773,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114088 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16288 | |||
|TSSclassifier=strong | |||
|UniProt=Q9C026 | |||
|association_with_transcript=5bp_to_ENST00000298355_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_TRIM9_5end | |||
|id=chr14:51562745..51562773,- | |||
|ontology_enrichment_celltype=CL:0002057!3.45e-08!42;CL:0000860!2.66e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.67e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.47e-19;82!UBERON:0006241;3.42e-11;3!UBERON:0003057;3.42e-11;3!UBERON:0010122;7.63e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.72e-56!57;UBERON:0005068!4.72e-56!57;UBERON:0006241!4.72e-56!57;UBERON:0007135!4.72e-56!57;UBERON:0001017!6.63e-52!82;UBERON:0005743!3.30e-50!86;UBERON:0000073!1.02e-48!94;UBERON:0001016!1.02e-48!94;UBERON:0002616!8.96e-46!59;UBERON:0003080!9.85e-46!42;UBERON:0002780!1.57e-44!41;UBERON:0001890!1.57e-44!41;UBERON:0006240!1.57e-44!41;UBERON:0000955!5.38e-42!69;UBERON:0006238!5.38e-42!69;UBERON:0007023!8.05e-42!115;UBERON:0003075!1.90e-37!86;UBERON:0007284!1.90e-37!86;UBERON:0002020!2.23e-35!34;UBERON:0003528!2.23e-35!34;UBERON:0001893!2.96e-35!34;UBERON:0002346!5.48e-35!90;UBERON:0002791!6.73e-34!33;UBERON:0001869!2.77e-32!32;UBERON:0003056!6.94e-29!61;UBERON:0004121!8.43e-23!169;UBERON:0000956!1.05e-22!25;UBERON:0000203!1.05e-22!25;UBERON:0002619!4.22e-22!22;UBERON:0000924!8.34e-22!173;UBERON:0006601!8.34e-22!173;UBERON:0000033!2.13e-20!123;UBERON:0000153!1.64e-19!129;UBERON:0007811!1.64e-19!129;UBERON:0001950!2.97e-19!20;UBERON:0002308!1.32e-14!9;UBERON:0000125!1.32e-14!9;UBERON:0002420!2.12e-14!9;UBERON:0007245!2.12e-14!9;UBERON:0010009!2.12e-14!9;UBERON:0010011!2.12e-14!9;UBERON:0000454!2.12e-14!9;UBERON:0002298!1.07e-12!8;UBERON:0009663!1.26e-11!7;UBERON:0003076!2.12e-11!15;UBERON:0003057!2.12e-11!15;UBERON:0000025!7.89e-11!194;UBERON:0001894!1.10e-10!7;UBERON:0006222!1.10e-10!7;UBERON:0000200!5.81e-10!6;UBERON:0000062!2.43e-09!511;UBERON:0004732!8.02e-09!13;UBERON:0000349!9.80e-09!5;UBERON:0000923!2.53e-08!604;UBERON:0005291!2.53e-08!604;UBERON:0006598!2.53e-08!604;UBERON:0002532!2.53e-08!604;UBERON:0000467!2.84e-08!625;UBERON:0002050!2.95e-08!605;UBERON:0005423!2.95e-08!605;UBERON:0000480!3.30e-08!626;UBERON:0000922!8.39e-08!612;UBERON:0004733!1.55e-07!12;UBERON:0002028!1.55e-07!12;UBERON:0007277!1.55e-07!12;UBERON:0001871!2.29e-07!7;UBERON:0000369!4.68e-07!4;UBERON:0002435!4.68e-07!4;UBERON:0000204!4.68e-07!4;UBERON:0010082!4.68e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;7.07e-57;34!UBERON:0002020;7.07e-57;34!UBERON:0001893;2.50e-55;34!UBERON:0002780;2.49e-54;41!UBERON:0001890;2.49e-54;41!UBERON:0002791;3.42e-54;32!UBERON:0001869;5.49e-54;32!UBERON:0000073;1.71e-50;53!UBERON:0002616;1.71e-50;53!UBERON:0002619;4.12e-47;22!UBERON:0000956;4.39e-41;25!UBERON:0000203;4.39e-41;25!UBERON:0001950;5.30e-41;20!UBERON:0001017;1.52e-33;75!UBERON:0000955;2.35e-29;68!UBERON:0000125;2.48e-29;9!UBERON:0002308;2.48e-29;9!UBERON:0001016;3.81e-29;83!UBERON:0002420;7.10e-29;9!UBERON:0007245;7.10e-29;9!UBERON:0010009;7.10e-29;9!UBERON:0010011;7.10e-29;9!UBERON:0000454;7.10e-29;9!UBERON:0009663;5.00e-23;7!UBERON:0002298;1.27e-19;6!UBERON:0000200;2.17e-19;6!UBERON:0000349;1.09e-16;5!UBERON:0004732;4.00e-15;13!UBERON:0007023;6.63e-15;114!UBERON:0000369;2.79e-13;4!UBERON:0002435;2.79e-13;4!UBERON:0000204;2.79e-13;4!UBERON:0004733;1.59e-12;12!UBERON:0002028;1.59e-12;12!UBERON:0001894;5.72e-12;7!UBERON:0001871;6.42e-12;6!UBERON:0002240;3.42e-11;3!UBERON:0005174;3.42e-11;3!UBERON:0001137;3.42e-11;3!UBERON:0011216;3.54e-11;132!UBERON:0001872;5.41e-11;5!UBERON:0000988;7.65e-11;3!UBERON:0002021;1.49e-10;5!UBERON:0001896;1.66e-10;3!UBERON:0005290;1.66e-10;3!UBERON:0005383;1.86e-10;3!UBERON:0005382;1.86e-10;3!UBERON:0001870;3.83e-10;3!UBERON:0002784;1.43e-08;4!UBERON:0010314;1.88e-08;132!UBERON:0001897;2.69e-08;2!UBERON:0010225;2.69e-08;2!UBERON:0001875;3.14e-08;2!UBERON:0006514;3.14e-08;2!UBERON:0005162;4.07e-08;2!UBERON:0000122;4.07e-08;2!UBERON:0001954;5.17e-08;2!UBERON:0002148;5.17e-08;2!UBERON:0006331;5.17e-08;2!UBERON:0009662;5.17e-08;2!UBERON:0003022;5.17e-08;2!UBERON:0002421;5.17e-08;2!UBERON:0002600;5.17e-08;2!UBERON:0002771;5.82e-08;2!UBERON:0001873;7.63e-08;2!UBERON:0001876;1.51e-07;2!UBERON:0002702;2.67e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.24e-98,56;UBERON:0005068,1.24e-98,56;UBERON:0006241,1.24e-98,56;UBERON:0007135,1.24e-98,56;UBERON:0000073,3.07e-89,53;UBERON:0002616,3.07e-89,53;UBERON:0001017,5.22e-89,81;UBERON:0001016,6.74e-83,89;UBERON:0002780,1.91e-78,41;UBERON:0001890,1.91e-78,41;UBERON:0003080,1.91e-78,41;UBERON:0006240,1.91e-78,41;UBERON:0000955,9.79e-74,68;UBERON:0006238,9.79e-74,68;UBERON:0003075,7.29e-68,82;UBERON:0007284,7.29e-68,82;UBERON:0003528,9.00e-68,34;UBERON:0002020,9.00e-68,34;UBERON:0001893,1.60e-67,34;UBERON:0002346,3.09e-64,86;UBERON:0002791,1.46e-61,32;UBERON:0001869,2.85e-61,32;UBERON:0003056,7.87e-54,61;UBERON:0010371,2.49e-51,104;UBERON:0002619,2.90e-47,22;UBERON:0007023,1.86e-46,114;UBERON:0000956,3.22e-41,25;UBERON:0000203,3.22e-41,25;UBERON:0001950,4.07e-41,20;UBERON:0010314,2.56e-40,132;UBERON:0004121,3.38e-38,171;UBERON:0000924,3.38e-38,171;UBERON:0006601,3.38e-38,171;UBERON:0000125,2.93e-29,9;UBERON:0002308,2.93e-29,9;UBERON:0002420,8.13e-29,9;UBERON:0007245,8.13e-29,9;UBERON:0010009,8.13e-29,9;UBERON:0010011,8.13e-29,9;UBERON:0000454,8.13e-29,9;UBERON:0011216,6.57e-28,223;UBERON:0009663,6.53e-23,7;UBERON:0000025,1.63e-21,192;UBERON:0003076,1.77e-20,15;UBERON:0003057,1.77e-20,15;UBERON:0002298,1.43e-19,6;UBERON:0000200,2.25e-19,6;UBERON:0000349,8.96e-17,5;UBERON:0004732,3.60e-15,13;UBERON:0004111,3.94e-15,240;UBERON:0000369,3.17e-13,4;UBERON:0002435,3.17e-13,4;UBERON:0000204,3.17e-13,4;UBERON:0010082,3.17e-13,4;UBERON:0004733,1.48e-12,12;UBERON:0002028,1.48e-12,12;UBERON:0007277,1.48e-12,12;UBERON:0001894,5.05e-12,7;UBERON:0006222,5.05e-12,7;UBERON:0001871,5.41e-12,6;UBERON:0002240,3.00e-11,3;UBERON:0005174,3.00e-11,3;UBERON:0001137,3.00e-11,3;UBERON:0001872,7.20e-11,5;UBERON:0000988,8.18e-11,3;UBERON:0002021,1.33e-10,5;UBERON:0001896,1.74e-10,3;UBERON:0005290,1.74e-10,3;UBERON:0010096,1.74e-10,3;UBERON:0000483,1.81e-10,306;UBERON:0005383,2.05e-10,3;UBERON:0005382,2.05e-10,3;UBERON:0000119,2.87e-10,309;UBERON:0001870,3.32e-10,3;UBERON:0000923,5.61e-09,560;UBERON:0010316,5.61e-09,560;UBERON:0005291,5.61e-09,560;UBERON:0006598,5.61e-09,560;UBERON:0010317,5.61e-09,560;UBERON:0002532,5.61e-09,560;UBERON:0002050,8.04e-09,564;UBERON:0002784,1.23e-08,4;UBERON:0001897,2.42e-08,2;UBERON:0010225,2.42e-08,2;UBERON:0001875,3.43e-08,2;UBERON:0006514,3.43e-08,2;UBERON:0005423,3.54e-08,581;UBERON:0005162,3.67e-08,2;UBERON:0000122,3.67e-08,2;UBERON:0001954,4.67e-08,2;UBERON:0002148,4.67e-08,2;UBERON:0006331,4.67e-08,2;UBERON:0009662,4.67e-08,2;UBERON:0003022,4.67e-08,2;UBERON:0002421,4.67e-08,2;UBERON:0002600,4.67e-08,2;UBERON:0002771,6.13e-08,2;UBERON:0001873,8.59e-08,2;UBERON:0010122,8.59e-08,2;UBERON:0000922,8.83e-08,592;UBERON:0001876,1.32e-07,2;UBERON:0002702,2.38e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,1.23350366406548,0.309706370895104,0.28769239232215,1.0246428261164,0.236482229888585,0,3.87290810150296,2.70852973188684,0,0.272906150057846,0,0.612167784741805,1.28371610830437,1.27867425159808,0,0.199463657621632,0,0,0.56738522469114,0,0.502497330513487,2.60741459210101,0.65156653411535,0,0.368277635987565,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30323011489202,1.30139853857622,1.54657762555539,0.837581326671744,4.46557126157214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,1.9882952955326,5.06409899077846,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,2.41197055220813,1.99613798001194,0,0,0.724999575434793,0,0,0,0,0,0,6.20018970069687,2.41192877250816,0,1.99042667876204,0.295547618953547,2.19385397153973,0,0,0.0769502585037971,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78548044162807,0,3.04543779442941,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65905343014691,0,0.0801588202515337,0,0,0,0,0.171594997861965,0.288109595976299,0,0,0,0,0,0,4.20294202096853,7.25598508127563,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,4.77137813885582,4.90332262001672,0,0,0,0,0,2.97672827624321,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0.979762080328227,0,0,0.340776043570843,0,0,0,4.91275234173892,4.62814106099415,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0.612691153526923,0,0,1.77213635993397,3.29470915235301,3.505346059782,4.0138643698305,2.3295100822739,2.98062734118641,0,0,0.303298235083296,0.285465333544967,0,0,0,0,0,0.554805861502613,1.32582103692562,0.251567901752575,1.77962244319307,0,0,0,0,0.318593534327405,0.899606224327209,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3920790099175,0,0,0,0,0.245772908753719,0,0,0,0,0,1.47284760201473,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,2.56916900385838,0,5.26791734888599,3.89721092057435,1.26035848110859,1.9364030689981,3.39098855826887,5.71077681036618,0,0,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0,2.83657855397258,3.12431239445539,3.72036233702131,3.17079050969534,0,0,0.992422356778588,0,0,3.74991285114801,0.336283722218824,1.82089681270989,0.227662191351298,0,0,0,2.31097092121228,3.02554758389106,0,0,0.078493092850514,1.57115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0.233939463462106,0,0,0,0,0,0,0.218559560503957,0,0,0,6.0855624805633,6.83206720752298,2.9585900930838,0,0,0,0,0,0,0,0,0,5.16022499345225,0,3.87551494088214,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0.227336094654718,0,5.80418607621146,6.5162787392994,0,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | |||
|short_description=p4@TRIM9 | |||
}} |
Revision as of 20:03, 11 January 2014
Short description: | p4@TRIM9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRIM9_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 5bp_to_ENST00000298355_5end |
EntrezGene: | TRIM9 |
HGNC: | 16288 |
UniProt: | Q9C026 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data