FFCP PHASE1:Hg19::chr15:49170219..49170261,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=399694 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16743 | |||
|TSSclassifier=strong | |||
|UniProt=F5H5M1 | |||
|association_with_transcript=0bp_to_ENST00000537958,ENST00000558220,uc010uez.1_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_SHC4_5end | |||
|id=chr15:49170219..49170261,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.71e-16;82!UBERON:0006241;7.07e-08;3!UBERON:0003057;7.07e-08;3!UBERON:0006215;4.40e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.45e-34!57;UBERON:0005068!5.45e-34!57;UBERON:0006241!5.45e-34!57;UBERON:0007135!5.45e-34!57;UBERON:0001017!3.47e-31!82;UBERON:0005743!3.95e-31!86;UBERON:0002616!1.28e-30!59;UBERON:0000955!4.61e-30!69;UBERON:0006238!4.61e-30!69;UBERON:0000073!1.81e-29!94;UBERON:0001016!1.81e-29!94;UBERON:0003075!1.15e-28!86;UBERON:0007284!1.15e-28!86;UBERON:0002346!4.12e-28!90;UBERON:0003080!1.45e-24!42;UBERON:0002780!3.34e-24!41;UBERON:0001890!3.34e-24!41;UBERON:0006240!3.34e-24!41;UBERON:0003056!2.27e-22!61;UBERON:0000033!2.03e-21!123;UBERON:0000153!2.36e-21!129;UBERON:0007811!2.36e-21!129;UBERON:0002020!5.16e-20!34;UBERON:0003528!5.16e-20!34;UBERON:0001893!5.91e-20!34;UBERON:0002791!2.62e-19!33;UBERON:0007023!1.48e-18!115;UBERON:0001869!1.70e-18!32;UBERON:0000924!3.34e-18!173;UBERON:0006601!3.34e-18!173;UBERON:0004121!3.46e-18!169;UBERON:0002619!4.35e-14!22;UBERON:0000956!9.38e-14!25;UBERON:0000203!9.38e-14!25;UBERON:0001950!9.48e-13!20;UBERON:0003076!1.86e-10!15;UBERON:0003057!1.86e-10!15;UBERON:0004732!4.07e-09!13;UBERON:0000475!1.02e-08!365;UBERON:0004733!2.09e-08!12;UBERON:0002028!2.09e-08!12;UBERON:0007277!2.09e-08!12;UBERON:0000477!2.95e-08!286;UBERON:0000064!4.65e-08!219;UBERON:0000025!6.91e-08!194;UBERON:0002308!6.97e-08!9;UBERON:0000125!6.97e-08!9;UBERON:0004111!8.47e-08!241;UBERON:0002420!9.79e-08!9;UBERON:0007245!9.79e-08!9;UBERON:0010009!9.79e-08!9;UBERON:0010011!9.79e-08!9;UBERON:0000454!9.79e-08!9;UBERON:0000119!1.37e-07!312;UBERON:0000483!1.90e-07!309;UBERON:0002298!8.56e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.49e-44;41!UBERON:0001890;6.49e-44;41!UBERON:0001893;1.69e-43;34!UBERON:0003528;3.96e-43;34!UBERON:0002020;3.96e-43;34!UBERON:0000073;4.79e-43;53!UBERON:0002616;4.79e-43;53!UBERON:0002791;1.39e-42;32!UBERON:0001869;2.19e-42;32!UBERON:0002619;2.84e-38;22!UBERON:0001950;3.10e-34;20!UBERON:0000956;4.32e-33;25!UBERON:0000203;4.32e-33;25!UBERON:0000955;3.90e-28;68!UBERON:0001017;5.91e-28;75!UBERON:0001016;5.07e-22;83!UBERON:0000125;1.31e-20;9!UBERON:0002308;1.31e-20;9!UBERON:0002420;3.71e-20;9!UBERON:0007245;3.71e-20;9!UBERON:0010009;3.71e-20;9!UBERON:0010011;3.71e-20;9!UBERON:0000454;3.71e-20;9!UBERON:0004732;2.95e-19;13!UBERON:0004733;3.41e-17;12!UBERON:0002028;3.41e-17;12!UBERON:0009663;2.50e-16;7!UBERON:0002298;3.23e-14;6!UBERON:0007023;4.38e-14;114!UBERON:0000200;1.46e-13;6!UBERON:0000349;1.53e-11;5!UBERON:0002680;2.61e-11;9!UBERON:0001895;2.61e-11;9!UBERON:0002021;2.68e-11;5!UBERON:0001894;4.65e-11;7!UBERON:0001871;4.69e-11;6!UBERON:0000369;1.18e-09;4!UBERON:0002435;1.18e-09;4!UBERON:0000204;1.18e-09;4!UBERON:0002784;2.08e-09;4!UBERON:0011216;2.97e-08;132!UBERON:0000988;5.71e-08;3!UBERON:0001896;6.39e-08;3!UBERON:0005290;6.39e-08;3!UBERON:0002240;7.07e-08;3!UBERON:0005174;7.07e-08;3!UBERON:0001137;7.07e-08;3!UBERON:0001872;1.16e-07;5!UBERON:0005383;1.19e-07;3!UBERON:0005382;1.19e-07;3!UBERON:0010314;1.39e-07;132!UBERON:0001870;1.41e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.30e-85,56;UBERON:0005068,4.30e-85,56;UBERON:0006241,4.30e-85,56;UBERON:0007135,4.30e-85,56;UBERON:0000073,1.34e-78,53;UBERON:0002616,1.34e-78,53;UBERON:0001017,2.65e-66,81;UBERON:0003075,1.16e-63,82;UBERON:0007284,1.16e-63,82;UBERON:0000955,4.32e-63,68;UBERON:0006238,4.32e-63,68;UBERON:0002346,2.60e-62,86;UBERON:0002780,6.14e-62,41;UBERON:0001890,6.14e-62,41;UBERON:0003080,6.14e-62,41;UBERON:0006240,6.14e-62,41;UBERON:0001016,6.72e-61,89;UBERON:0003528,6.17e-52,34;UBERON:0002020,6.17e-52,34;UBERON:0001893,9.13e-52,34;UBERON:0010371,6.54e-49,104;UBERON:0002791,1.18e-47,32;UBERON:0001869,2.12e-47,32;UBERON:0003056,1.39e-45,61;UBERON:0007023,2.77e-44,114;UBERON:0002619,1.72e-38,22;UBERON:0010314,1.94e-38,132;UBERON:0001950,1.94e-34,20;UBERON:0000956,2.79e-33,25;UBERON:0000203,2.79e-33,25;UBERON:0004121,1.07e-31,171;UBERON:0000924,1.07e-31,171;UBERON:0006601,1.07e-31,171;UBERON:0000025,2.68e-23,192;UBERON:0003076,4.52e-23,15;UBERON:0003057,4.52e-23,15;UBERON:0011216,1.56e-21,223;UBERON:0000125,1.32e-20,9;UBERON:0002308,1.32e-20,9;UBERON:0002420,3.66e-20,9;UBERON:0007245,3.66e-20,9;UBERON:0010009,3.66e-20,9;UBERON:0010011,3.66e-20,9;UBERON:0000454,3.66e-20,9;UBERON:0004732,3.96e-19,13;UBERON:0004733,4.54e-17,12;UBERON:0002028,4.54e-17,12;UBERON:0007277,4.54e-17,12;UBERON:0009663,2.51e-16,7;UBERON:0004111,2.51e-16,240;UBERON:0002298,3.27e-14,6;UBERON:0000200,1.56e-13,6;UBERON:0000483,4.89e-12,306;UBERON:0000119,9.10e-12,309;UBERON:0000349,1.46e-11,5;UBERON:0002021,1.82e-11,5;UBERON:0001894,2.76e-11,7;UBERON:0006222,2.76e-11,7;UBERON:0002680,3.38e-11,9;UBERON:0001895,3.38e-11,9;UBERON:0010092,3.38e-11,9;UBERON:0001871,4.03e-11,6;UBERON:0000369,1.19e-09,4;UBERON:0002435,1.19e-09,4;UBERON:0000204,1.19e-09,4;UBERON:0010082,1.19e-09,4;UBERON:0002784,1.48e-09,4;UBERON:0000988,5.75e-08,3;UBERON:0001896,6.43e-08,3;UBERON:0005290,6.43e-08,3;UBERON:0010096,6.43e-08,3;UBERON:0002240,7.04e-08,3;UBERON:0005174,7.04e-08,3;UBERON:0001137,7.04e-08,3;UBERON:0001872,1.18e-07,5;UBERON:0005383,1.20e-07,3;UBERON:0005382,1.20e-07,3;UBERON:0001870,1.43e-07,3 | |||
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| |||
|short_description=p1@SHC4 | |||
}} |
Revision as of 23:26, 11 January 2014
Short description: | p1@SHC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SHC4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000537958, ENST00000558220, uc010uez.1_5end |
EntrezGene: | SHC4 |
HGNC: | 16743 |
UniProt: | F5H5M1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data