FFCP PHASE1:Hg19::chr17:8063791..8063808,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6844 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12643 | |||
|TSSclassifier=weak | |||
|UniProt=Q69Z01 | |||
|association_with_transcript=138bp_to_AL050223_5end | |||
|coexpression_cluster_id=C32 | |||
|description=CAGE_peak_11_at_VAMP2_5end | |||
|id=chr17:8063791..8063808,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.93e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.05e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.40e-12;82!UBERON:0006215;1.45e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.51e-38!57;UBERON:0005068!3.51e-38!57;UBERON:0006241!3.51e-38!57;UBERON:0007135!3.51e-38!57;UBERON:0007023!4.20e-35!115;UBERON:0001017!6.79e-35!82;UBERON:0005743!1.22e-34!86;UBERON:0002780!8.59e-33!41;UBERON:0001890!8.59e-33!41;UBERON:0006240!8.59e-33!41;UBERON:0000955!9.54e-33!69;UBERON:0006238!9.54e-33!69;UBERON:0000073!4.02e-32!94;UBERON:0001016!4.02e-32!94;UBERON:0003080!1.38e-31!42;UBERON:0002616!3.46e-31!59;UBERON:0002346!2.07e-27!90;UBERON:0002020!2.47e-27!34;UBERON:0003528!2.47e-27!34;UBERON:0001893!1.02e-26!34;UBERON:0003075!1.60e-26!86;UBERON:0007284!1.60e-26!86;UBERON:0002791!5.75e-26!33;UBERON:0001869!2.10e-25!32;UBERON:0002619!8.50e-22!22;UBERON:0003056!1.74e-21!61;UBERON:0001950!8.31e-20!20;UBERON:0000956!1.22e-19!25;UBERON:0000203!1.22e-19!25;UBERON:0000924!9.53e-15!173;UBERON:0006601!9.53e-15!173;UBERON:0000153!1.65e-14!129;UBERON:0007811!1.65e-14!129;UBERON:0000033!1.94e-14!123;UBERON:0004121!5.98e-14!169;UBERON:0002420!3.02e-09!9;UBERON:0007245!3.02e-09!9;UBERON:0010009!3.02e-09!9;UBERON:0010011!3.02e-09!9;UBERON:0000454!3.02e-09!9;UBERON:0002308!3.69e-09!9;UBERON:0000125!3.69e-09!9;UBERON:0001871!6.24e-09!7;UBERON:0003076!6.18e-08!15;UBERON:0003057!6.18e-08!15;UBERON:0001894!1.80e-07!7;UBERON:0006222!1.80e-07!7;UBERON:0009663!2.60e-07!7;UBERON:0000200!5.59e-07!6;UBERON:0000025!7.41e-07!194;UBERON:0004732!7.67e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.16e-53;22!UBERON:0003528;1.32e-52;34!UBERON:0002020;1.32e-52;34!UBERON:0002791;1.56e-51;32!UBERON:0001869;9.27e-48;32!UBERON:0002780;5.59e-47;41!UBERON:0001890;5.59e-47;41!UBERON:0000956;1.70e-46;25!UBERON:0000203;1.70e-46;25!UBERON:0001950;2.50e-46;20!UBERON:0001893;2.24e-44;34!UBERON:0000073;4.60e-41;53!UBERON:0002616;4.60e-41;53!UBERON:0000955;4.60e-32;68!UBERON:0001017;1.99e-26;75!UBERON:0001871;1.26e-24;6!UBERON:0001016;5.69e-23;83!UBERON:0002420;2.09e-18;9!UBERON:0007245;2.09e-18;9!UBERON:0010009;2.09e-18;9!UBERON:0010011;2.09e-18;9!UBERON:0000454;2.09e-18;9!UBERON:0000125;3.24e-18;9!UBERON:0002308;3.24e-18;9!UBERON:0004732;3.90e-16;13!UBERON:0002784;5.16e-15;4!UBERON:0004733;1.19e-13;12!UBERON:0002028;1.19e-13;12!UBERON:0007023;3.22e-13;114!UBERON:0001894;9.87e-13;7!UBERON:0000349;1.22e-12;5!UBERON:0002021;3.00e-12;5!UBERON:0009663;4.37e-12;7!UBERON:0001870;8.03e-12;3!UBERON:0000200;1.07e-10;6!UBERON:0011216;1.38e-10;132!UBERON:0002680;5.42e-10;9!UBERON:0001895;5.42e-10;9!UBERON:0002298;1.47e-09;6!UBERON:0002702;6.96e-09;2!UBERON:0002771;7.09e-09;2!UBERON:0001954;7.93e-09;2!UBERON:0003022;7.93e-09;2!UBERON:0002421;7.93e-09;2!UBERON:0002600;7.93e-09;2!UBERON:0001876;1.13e-08;2!UBERON:0001905;2.07e-08;2!UBERON:0002148;2.07e-08;2!UBERON:0002757;2.07e-08;2!UBERON:0010134;2.07e-08;2!UBERON:0006331;2.07e-08;2!UBERON:0009662;2.07e-08;2!UBERON:0005408;2.07e-08;2!UBERON:0001899;2.07e-08;2!UBERON:0001897;2.67e-08;2!UBERON:0010225;2.67e-08;2!UBERON:0001875;7.90e-08;2!UBERON:0006514;7.90e-08;2!UBERON:0010314;4.05e-07;132!UBERON:0001872;4.73e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.91e-78,53;UBERON:0002616,2.91e-78,53;UBERON:0001049,4.52e-78,56;UBERON:0005068,4.52e-78,56;UBERON:0006241,4.52e-78,56;UBERON:0007135,4.52e-78,56;UBERON:0000955,3.12e-69,68;UBERON:0006238,3.12e-69,68;UBERON:0001017,1.02e-66,81;UBERON:0002780,2.68e-65,41;UBERON:0001890,2.68e-65,41;UBERON:0003080,2.68e-65,41;UBERON:0006240,2.68e-65,41;UBERON:0003528,1.28e-63,34;UBERON:0002020,1.28e-63,34;UBERON:0001016,2.76e-62,89;UBERON:0002791,2.85e-57,32;UBERON:0003075,1.13e-53,82;UBERON:0007284,1.13e-53,82;UBERON:0001893,1.25e-53,34;UBERON:0002619,4.13e-53,22;UBERON:0001869,1.03e-52,32;UBERON:0002346,9.13e-51,86;UBERON:0000956,2.15e-46,25;UBERON:0000203,2.15e-46,25;UBERON:0001950,3.25e-46,20;UBERON:0003056,7.53e-45,61;UBERON:0007023,5.29e-43,114;UBERON:0010371,1.96e-40,104;UBERON:0010314,9.22e-36,132;UBERON:0004121,4.34e-28,171;UBERON:0000924,4.34e-28,171;UBERON:0006601,4.34e-28,171;UBERON:0001871,1.75e-24,6;UBERON:0011216,2.50e-24,223;UBERON:0000025,3.62e-20,192;UBERON:0002420,1.60e-18,9;UBERON:0007245,1.60e-18,9;UBERON:0010009,1.60e-18,9;UBERON:0010011,1.60e-18,9;UBERON:0000454,1.60e-18,9;UBERON:0000125,2.81e-18,9;UBERON:0002308,2.81e-18,9;UBERON:0004732,2.28e-16,13;UBERON:0002784,6.66e-15,4;UBERON:0004111,3.04e-14,240;UBERON:0003076,4.35e-14,15;UBERON:0003057,4.35e-14,15;UBERON:0004733,7.53e-14,12;UBERON:0002028,7.53e-14,12;UBERON:0007277,7.53e-14,12;UBERON:0001894,9.54e-13,7;UBERON:0006222,9.54e-13,7;UBERON:0000349,1.14e-12,5;UBERON:0002021,3.05e-12,5;UBERON:0009663,3.66e-12,7;UBERON:0001870,1.12e-11,3;UBERON:0000483,1.90e-11,306;UBERON:0000119,3.06e-11,309;UBERON:0000200,1.06e-10,6;UBERON:0002680,5.08e-10,9;UBERON:0001895,5.08e-10,9;UBERON:0010092,5.08e-10,9;UBERON:0002298,9.74e-10,6;UBERON:0002702,6.84e-09,2;UBERON:0002771,7.11e-09,2;UBERON:0001954,7.95e-09,2;UBERON:0003022,7.95e-09,2;UBERON:0002421,7.95e-09,2;UBERON:0002600,7.95e-09,2;UBERON:0001876,1.03e-08,2;UBERON:0002148,2.24e-08,2;UBERON:0006331,2.24e-08,2;UBERON:0009662,2.24e-08,2;UBERON:0001905,2.58e-08,2;UBERON:0002757,2.58e-08,2;UBERON:0010134,2.58e-08,2;UBERON:0005408,2.58e-08,2;UBERON:0001899,2.58e-08,2;UBERON:0001897,2.78e-08,2;UBERON:0010225,2.78e-08,2;UBERON:0001875,5.29e-08,2;UBERON:0006514,5.29e-08,2;UBERON:0001872,3.84e-07,5 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.893922188854576,0,0,0,0,0,0,0,0,0.123766352960047,0,1.34465029290355,0,0,0.487932798790507,0,0,0,0,0.273748850145768,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0.154934401160603,0,0,0.553995408531877,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0.786021525498329,0.411202997999018,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,1.24930726552346,0,0,0.80642697289893,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.862510299438069,0.898401253958239,0,0,1.54657762555539,0.167516265334349,1.27587750330633,3.74503511973591,5.9832291840805,1.24324654030811,0.12269149171914,0,0,1.03985430765404,0.892144943985809,0.315404830067869,0.35142424497814,0,0,0,0,0,0,0,0.343143423810856,0.620304078368662,0.215714200818617,0.426910231213777,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0,0.200506470303285,0.0920809889358963,0,0.364182336013434,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0.35667105148125,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0,0,0,4.97073823883149,7.59614848616769,0,0,0.422250816255987,0.796991953004279,0.276283915531148,0,0,0.123084805461069,0,0,0.179021174675609,0,0,0,0,2.90799823828566,1.20598527610407,3.99227596002388,0,0,0,0.227586896570999,0.254253650292766,0.236387681767936,0.689486746482929,0.291604613383254,0.868124974666461,0.885741385813839,1.80894657938112,1.52581736317083,5.19722521676756,4.72876190325676,0.87754158861589,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0,2.4441205797345,0,0,0,0.337005664903385,0,1.63985112007737,0.182454789215666,0,0.242780379534093,0.394584402849391,1.20990716048664,1.22429104652196,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0,0,0,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0.451961481561065,0,0,1.2029051231617,0.391102765469606,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0.104602846312333,0.203996435272644,0,1.80126086612937,2.46429682005587,0,0.429765441419957,0,0,0.916641696046735,0,0.599037001496973,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0.338693328263138,5.56660782866512,10.3514588644797,0.160753148465019,0,0,0,0,0.607495566580247,0.335434687599266,0,0.0524545881349981,0.105600336519406,0,0,1.42939065274673,0,0,0,0,0,0,0,0.170388021785422,0,0,0,4.65418642901582,3.43804764530994,0,0,0.106787412567695,0.314408610199332,1.24271716604159,0,0.197611631897944,0,0,0,0,0,0,0,9.74674997963685,6.34536577490208,8.26260142662899,1.72022758707021,1.66393577305278,0.372578417648301,0.138348634936231,0,0,0.285465333544967,0,0.468334905806882,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0.358177682162975,0,0,0,0,0.337884881306145,0,0,0.303859956177382,11.1989333282902,0.194860308839388,0,0,0,0.245772908753719,0.211312123358627,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0.637724760305049,0.123935764259002,0,0.318004350653419,0.0788617450012534,0,0,0,0.642292250964595,4.25089728976755,9.25876382531477,3.48697819209284,3.78107544332577,0.414943514785307,4.68279372332368,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,1.56302802246618,0,0,0,0.810451015420736,1.56215619722769,7.85409826704499,0.634158101939068,3.82882366312754,0,0,0,0.127762427639595,3.21421101526972,4.03540466662589,0.606965604236632,0.682986574053893,0,0,0,0.815636795721981,0.657727735628491,0,0,0.078493092850514,3.14231179832004,0,0,0,0.9555033757741,0.500335809236594,0.158013611732727,0.116241425368125,0,0,0,0.51215543128185,0,0,0,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0.111855431797792,0.098150233615243,0,1.29485767437579,0.205325613712494,0,0,0,0.994753875806841,0.237840181555137,0,0.109940516745429,0.150962843566674,0.231522474323834,0,0,0.490296643507811,0,2.1593931382644,0.297046400327086,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0,0.352894871715692,0.0802413666891683,0,0,1.00337708206016,0,1.35982980381829,3.49080552272302,0.5290268405154,0,0,0,0,0.109265571963696,0,0,0,0,0,0.378893491091197,1.07185652062471,4.1458471972939,2.68925789240928,0.213233981900981,0,0.129177819672012,0.248298857183432,0,0,1.21270313374932,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.366724332548599,0,0,0.402547587182052,0 | |||
|short_description=p11@VAMP2 | |||
}} |
Revision as of 13:46, 20 January 2014
Short description: | p11@VAMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_VAMP2_5end |
Coexpression cluster: | C32_middle_occipital_parietal_hippocampus_amygdala_medial_olfactory |
Association with transcript: | 138bp_to_AL050223_5end |
EntrezGene: | VAMP2 |
HGNC: | 12643 |
UniProt: | Q69Z01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.05e-11 | 3 |