FFCP PHASE1:Hg19::chr17:30814070..30814107,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8851 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1775 | |||
|TSSclassifier=strong | |||
|UniProt=Q15078,Q8N619 | |||
|association_with_transcript=0bp_to_NM_003885,uc002hhn.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_CDK5R1_5end | |||
|id=chr17:30814070..30814107,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.70e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.32e-08,10;CL:0000541,2.32e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.15e-13;82!UBERON:0006215;2.44e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!4.92e-35!86;UBERON:0001017!9.45e-35!82;UBERON:0000073!3.11e-34!94;UBERON:0001016!3.11e-34!94;UBERON:0001049!8.21e-30!57;UBERON:0005068!8.21e-30!57;UBERON:0006241!8.21e-30!57;UBERON:0007135!8.21e-30!57;UBERON:0000955!9.01e-28!69;UBERON:0006238!9.01e-28!69;UBERON:0002616!1.04e-24!59;UBERON:0002780!3.52e-24!41;UBERON:0001890!3.52e-24!41;UBERON:0006240!3.52e-24!41;UBERON:0003080!3.98e-23!42;UBERON:0003075!1.95e-22!86;UBERON:0007284!1.95e-22!86;UBERON:0001869!5.38e-22!32;UBERON:0001893!1.77e-21!34;UBERON:0002020!1.94e-21!34;UBERON:0003528!1.94e-21!34;UBERON:0002346!3.50e-21!90;UBERON:0004121!6.93e-21!169;UBERON:0002791!1.08e-20!33;UBERON:0000924!3.17e-20!173;UBERON:0006601!3.17e-20!173;UBERON:0003056!1.35e-18!61;UBERON:0000956!6.34e-18!25;UBERON:0000203!6.34e-18!25;UBERON:0002619!2.27e-17!22;UBERON:0000153!8.43e-17!129;UBERON:0007811!8.43e-17!129;UBERON:0000033!1.52e-16!123;UBERON:0001950!6.85e-16!20;UBERON:0007023!1.12e-12!115;UBERON:0000064!1.11e-09!219;UBERON:0003076!7.80e-08!15;UBERON:0003057!7.80e-08!15;UBERON:0000025!1.44e-07!194;UBERON:0000119!3.20e-07!312;UBERON:0000483!3.22e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.07e-45;32!UBERON:0003528;2.03e-44;34!UBERON:0002020;2.03e-44;34!UBERON:0001893;3.17e-44;34!UBERON:0002619;5.56e-44;22!UBERON:0002791;1.25e-42;32!UBERON:0000956;2.11e-41;25!UBERON:0000203;2.11e-41;25!UBERON:0002780;4.24e-40;41!UBERON:0001890;4.24e-40;41!UBERON:0001950;4.30e-40;20!UBERON:0000073;6.92e-35;53!UBERON:0002616;6.92e-35;53!UBERON:0000955;1.17e-28;68!UBERON:0001017;1.83e-28;75!UBERON:0001016;5.04e-23;83!UBERON:0000200;7.06e-14;6!UBERON:0002021;5.60e-12;5!UBERON:0001871;1.05e-11;6!UBERON:0001872;1.15e-11;5!UBERON:0000349;2.38e-11;5!UBERON:0002420;3.94e-11;9!UBERON:0007245;3.94e-11;9!UBERON:0010009;3.94e-11;9!UBERON:0010011;3.94e-11;9!UBERON:0000454;3.94e-11;9!UBERON:0000125;1.05e-10;9!UBERON:0002308;1.05e-10;9!UBERON:0007023;2.69e-10;114!UBERON:0004733;6.23e-10;12!UBERON:0002028;6.23e-10;12!UBERON:0011216;1.22e-09;132!UBERON:0000369;4.45e-09;4!UBERON:0002435;4.45e-09;4!UBERON:0000204;4.45e-09;4!UBERON:0004732;4.78e-09;13!UBERON:0002784;2.11e-08;4!UBERON:0002298;2.67e-08;6!UBERON:0002680;4.92e-08;9!UBERON:0001895;4.92e-08;9!UBERON:0001870;9.08e-08;3!UBERON:0009663;1.41e-07;7!UBERON:0001894;3.74e-07;7!UBERON:0005383;4.34e-07;3!UBERON:0005382;4.34e-07;3!UBERON:0000988;8.19e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.07e-70,56;UBERON:0005068,6.07e-70,56;UBERON:0006241,6.07e-70,56;UBERON:0007135,6.07e-70,56;UBERON:0001017,1.08e-68,81;UBERON:0000073,5.32e-65,53;UBERON:0002616,5.32e-65,53;UBERON:0001016,9.24e-63,89;UBERON:0000955,1.34e-60,68;UBERON:0006238,1.34e-60,68;UBERON:0002780,2.33e-56,41;UBERON:0001890,2.33e-56,41;UBERON:0003080,2.33e-56,41;UBERON:0006240,2.33e-56,41;UBERON:0001869,7.59e-51,32;UBERON:0001893,9.63e-51,34;UBERON:0003528,1.22e-50,34;UBERON:0002020,1.22e-50,34;UBERON:0003075,1.91e-47,82;UBERON:0007284,1.91e-47,82;UBERON:0002791,5.00e-47,32;UBERON:0002346,1.62e-46,86;UBERON:0002619,6.03e-44,22;UBERON:0000956,2.28e-41,25;UBERON:0000203,2.28e-41,25;UBERON:0001950,4.54e-40,20;UBERON:0003056,1.49e-38,61;UBERON:0010371,1.40e-37,104;UBERON:0004121,2.10e-33,171;UBERON:0000924,2.10e-33,171;UBERON:0006601,2.10e-33,171;UBERON:0007023,3.07e-29,114;UBERON:0010314,1.54e-25,132;UBERON:0011216,5.54e-22,223;UBERON:0003076,1.95e-14,15;UBERON:0003057,1.95e-14,15;UBERON:0000200,7.50e-14,6;UBERON:0000025,2.87e-13,192;UBERON:0002021,6.13e-12,5;UBERON:0001871,1.02e-11,6;UBERON:0001872,1.12e-11,5;UBERON:0000349,2.42e-11,5;UBERON:0002420,4.28e-11,9;UBERON:0007245,4.28e-11,9;UBERON:0010009,4.28e-11,9;UBERON:0010011,4.28e-11,9;UBERON:0000454,4.28e-11,9;UBERON:0000125,8.08e-11,9;UBERON:0002308,8.08e-11,9;UBERON:0004733,3.78e-10,12;UBERON:0002028,3.78e-10,12;UBERON:0007277,3.78e-10,12;UBERON:0004111,2.97e-09,240;UBERON:0004732,3.03e-09,13;UBERON:0000369,5.04e-09,4;UBERON:0002435,5.04e-09,4;UBERON:0000204,5.04e-09,4;UBERON:0010082,5.04e-09,4;UBERON:0002298,1.37e-08,6;UBERON:0002784,1.49e-08,4;UBERON:0002680,3.66e-08,9;UBERON:0001895,3.66e-08,9;UBERON:0010092,3.66e-08,9;UBERON:0001870,9.46e-08,3;UBERON:0009663,1.55e-07,7;UBERON:0001894,2.86e-07,7;UBERON:0006222,2.86e-07,7;UBERON:0000483,3.33e-07,306;UBERON:0005383,4.85e-07,3;UBERON:0005382,4.85e-07,3;UBERON:0000988,4.95e-07,3;UBERON:0000119,5.20e-07,309 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0.527533956456907,0.123766352960047,0,0.672325146451775,0,0,0.975865597581014,0.123121058076788,0.204000691244253,0,0.572471974262113,0.136874425072884,1.25542639594803,1.06978768047132,0.738905305049512,0.629686250509434,0,0.383829398097213,0.154816123316076,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.336985893439485,0,0,0.570025487482497,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0,0.954053754535364,0.569212969109448,2.93618594685469,1.52909291250092,0,0,0,0.590129310341499,0.393010762749165,0.616804496998528,0,1.62961133316795,0.473447805734733,1.94826728407911,0.111410456885174,0.294605907474837,0.443067789167242,0,0,0,0.164437904603676,0.276350017785848,0.579606171470105,1.18629250529648,0.802622484269139,0,0.339928028092699,1.14966148080576,0.68725489096526,0,0,0.651083453856419,0,0.451725357233318,0.383959833463255,0,0.473554504088034,0,0.403213486449465,0,0.868946423296794,0,0,0,0,0,0,0,0,0.283604451492204,0,0.175669571386252,2.42311289670768,0.364295288292542,1.11235332835329,0,0,0,0.953962497221368,1.14398982156026,1.11437250398869,0,0.860234595106124,0.347140501607594,0,0.838998872419812,0,0.208994966536811,0,0,0.66944122552934,0,0.760272105718513,0.24406205754817,0,0,0.267899184852239,0,0.337834441449967,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0.252433774244115,0,0,0,0.201504196455281,0,0,0,0.286804595389004,0.975789649036763,0.662648841607426,0.348581828608555,0.518305275076852,0.252320850875628,1.45990943630332,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.878002283269004,0,0.201057944823262,0.740707561268237,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,1.15014803749563,0,0,0,0,0,1.14296209725904,1.90994212779139,1.17217447210047,1.71072446022705,1.33675740514321,1.50171528921959,1.42913216315289,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0.224170287987055,0.788123040807709,0.431255149719035,0.385029108839245,0.76228387266739,1.30139853857622,2.31986643833309,4.69045542936177,3.82763250991898,1.49801404789436,0,0.828831026872071,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0.664225598535437,0,0.0868836144680828,0.391602314925481,1.71571711905428,1.03384013061444,0.862856803274467,0.533637789017222,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0,0,0.519254429183621,0,0,0.200506470303285,0.368323955743585,0,0,0,0.451199612907412,0.308061348417659,0.784349769176855,0,0.211103257785751,1.13733384070897,0.680374821106063,0.215915916102139,0,0.541892875087706,0,0.509752546090077,0,0.447749509444357,0,0,0.256450125116389,0.656029291399411,0,0,0.366277859273374,0.330037999682352,0.574265537996172,0.650060246036521,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0,0,0.426133137080504,0.0890320356467374,0,0.384380134730212,0,0.30347334256665,0,0,0,0,0,0,0,0.143124886741991,0.744316738719335,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0.288666338176536,0.670302275535787,0,0,0,1.68471475667626,0.886860307073351,0.918893600827838,0,0,0,0.476463550915578,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,1.4098700508785,0.748562161632879,0,0,0,0.568272293612826,0.71623345421307,0,0,9.94147647766298,6.04878490565205,0.111308705022906,0,0.844501632511974,0,0,0,1.53403023753232,0.492339221844278,0.311039587661807,0.179736702294654,0,0.511572370226872,0,0,0,18.4173221758092,11.874316564717,35.930483640215,0,0.174919999992391,0,1.0241410345695,0,0,0.689486746482929,0,0.694499979733169,3.54296554325536,3.13550740426061,6.10326945268333,3.98085335752409,9.16197618755997,9.87234287192876,0,0,0.0769502585037971,0.113942055847001,0.23056390438806,0.0897576444097721,0,0,0.0915975934018623,0,0,0.156980256395025,0,0.225595660617181,0,0.167821586975843,0,0,0.421996129056054,0,0.282706142867882,1.51472047819464,0,0.176915129006678,0,0,0,0,1.61762719153625,0,3.98249557733077,0,0,0,0,0,14.385419796633,0.252746318513952,0.150323419414493,0.414752765588989,0,0,0,0,0,0,0,0.195984794828755,0.34823682632161,0,0,0,0,0,0.484945082442097,0,1.35588444468319,0.137041924646751,0.397429223405979,13.3585779466904,0,0.400794101257669,0.426905989478705,0.19980960958213,0,0.114536596165916,0.857974989309823,0,0,0.471388069233591,0.815425236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| |||
|short_description=p5@CDK5R1 | |||
}} |
Revision as of 14:39, 20 January 2014
Short description: | p5@CDK5R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CDK5R1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_003885, uc002hhn.2_5end |
EntrezGene: | CDK5R1 |
HGNC: | 1775 |
UniProt: | Q15078Q8N619 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.32e-08 | 10 |
melanoblast | 2.32e-08 | 10 |