FFCP PHASE1:Hg19::chr19:38085768..38085821,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=163255 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25331 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002ogu.2,uc010efq.2_5end | |||
|coexpression_cluster_id=C652 | |||
|description=CAGE_peak_1_at_ZNF540_5end | |||
|id=chr19:38085768..38085821,+ | |||
|ontology_enrichment_celltype=CL:0000838!4.66e-09!52;CL:0000542!7.00e-09!53;CL:0000051!7.00e-09!53;CL:0000791!1.72e-08!18;CL:0000789!1.72e-08!18;CL:0002420!1.72e-08!18;CL:0002419!1.72e-08!18;CL:0000790!1.72e-08!18;CL:0000625!3.42e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.32e-11;18!CL:0000789;4.32e-11;18!CL:0002419;4.32e-11;18!CL:0000625;5.69e-09;11!CL:0000084;3.21e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.08e-11,18;CL:0000789,4.08e-11,18;CL:0002420,4.08e-11,18;CL:0002419,4.08e-11,18;CL:0000790,4.08e-11,18;CL:0000838,7.29e-10,52;CL:0000542,1.91e-09,53;CL:0000051,1.91e-09,53;CL:0000625,6.04e-09,11;CL:0000084,2.19e-08,25;CL:0000827,2.19e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000790;4.32e-11;18!UBERON:0006601;7.60e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.10e-51!115;UBERON:0001049!2.56e-30!57;UBERON:0005068!2.56e-30!57;UBERON:0006241!2.56e-30!57;UBERON:0007135!2.56e-30!57;UBERON:0002616!1.26e-25!59;UBERON:0001017!1.56e-25!82;UBERON:0003080!7.75e-25!42;UBERON:0002780!1.25e-24!41;UBERON:0001890!1.25e-24!41;UBERON:0006240!1.25e-24!41;UBERON:0000955!8.73e-24!69;UBERON:0006238!8.73e-24!69;UBERON:0005743!1.65e-23!86;UBERON:0000073!7.72e-22!94;UBERON:0001016!7.72e-22!94;UBERON:0001893!3.22e-20!34;UBERON:0002020!3.47e-20!34;UBERON:0003528!3.47e-20!34;UBERON:0002791!1.50e-19!33;UBERON:0001869!4.51e-19!32;UBERON:0003075!1.03e-18!86;UBERON:0007284!1.03e-18!86;UBERON:0002346!5.02e-18!90;UBERON:0002619!2.15e-15!22;UBERON:0000956!1.50e-14!25;UBERON:0000203!1.50e-14!25;UBERON:0001950!3.51e-14!20;UBERON:0003056!2.49e-13!61;UBERON:0000153!5.35e-12!129;UBERON:0007811!5.35e-12!129;UBERON:0000033!4.26e-11!123;UBERON:0004121!4.62e-10!169;UBERON:0000924!6.67e-10!173;UBERON:0006601!6.67e-10!173;UBERON:0002420!2.77e-07!9;UBERON:0007245!2.77e-07!9;UBERON:0010009!2.77e-07!9;UBERON:0010011!2.77e-07!9;UBERON:0000454!2.77e-07!9;UBERON:0002308!3.81e-07!9;UBERON:0000125!3.81e-07!9;UBERON:0003076!8.21e-07!15;UBERON:0003057!8.21e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.50e-22;41!UBERON:0001890;7.50e-22;41!UBERON:0001893;6.44e-21;34!UBERON:0003528;7.43e-21;34!UBERON:0002020;7.43e-21;34!UBERON:0001869;9.83e-21;32!UBERON:0002791;1.07e-20;32!UBERON:0000073;5.01e-20;53!UBERON:0002616;5.01e-20;53!UBERON:0002619;1.03e-19;22!UBERON:0001950;4.01e-18;20!UBERON:0000956;3.34e-17;25!UBERON:0000203;3.34e-17;25!UBERON:0007023;1.40e-16;114!UBERON:0001017;1.78e-12;75!UBERON:0000955;2.72e-12;68!UBERON:0001016;8.23e-11;83!UBERON:0002420;4.44e-09;9!UBERON:0007245;4.44e-09;9!UBERON:0010009;4.44e-09;9!UBERON:0010011;4.44e-09;9!UBERON:0000454;4.44e-09;9!UBERON:0000125;6.72e-09;9!UBERON:0002308;6.72e-09;9!UBERON:0009663;1.94e-07;7!UBERON:0001894;3.41e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.10e-64,114;UBERON:0001049,1.96e-36,56;UBERON:0005068,1.96e-36,56;UBERON:0006241,1.96e-36,56;UBERON:0007135,1.96e-36,56;UBERON:0000073,3.35e-34,53;UBERON:0002616,3.35e-34,53;UBERON:0002780,3.14e-30,41;UBERON:0001890,3.14e-30,41;UBERON:0003080,3.14e-30,41;UBERON:0006240,3.14e-30,41;UBERON:0001017,5.90e-29,81;UBERON:0001016,4.70e-26,89;UBERON:0000955,9.80e-26,68;UBERON:0006238,9.80e-26,68;UBERON:0001893,1.80e-24,34;UBERON:0003528,1.98e-24,34;UBERON:0002020,1.98e-24,34;UBERON:0003075,2.02e-23,82;UBERON:0007284,2.02e-23,82;UBERON:0001869,5.69e-23,32;UBERON:0002791,6.36e-23,32;UBERON:0002346,3.71e-21,86;UBERON:0002619,1.09e-19,22;UBERON:0001950,4.26e-18,20;UBERON:0003056,1.49e-17,61;UBERON:0000956,4.29e-17,25;UBERON:0000203,4.29e-17,25;UBERON:0010371,9.15e-16,104;UBERON:0010314,1.29e-12,132;UBERON:0011216,3.47e-12,223;UBERON:0004121,1.45e-10,171;UBERON:0000924,1.45e-10,171;UBERON:0006601,1.45e-10,171;UBERON:0002420,4.58e-09,9;UBERON:0007245,4.58e-09,9;UBERON:0010009,4.58e-09,9;UBERON:0010011,4.58e-09,9;UBERON:0000454,4.58e-09,9;UBERON:0000125,6.96e-09,9;UBERON:0002308,6.96e-09,9;UBERON:0003076,1.30e-07,15;UBERON:0003057,1.30e-07,15;UBERON:0009663,2.01e-07,7;UBERON:0001894,3.46e-07,7;UBERON:0006222,3.46e-07,7 | |||
|phase1_expression=1.09007027562334,0.642301571672949,0.845726424575827,1.0007329835313,1.34088328328186,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0,0,0.495065411840187,0,0,0,0,0,0.492484232307152,0.204000691244253,0.313454721478088,1.14494394852423,0.547497700291537,0.753255837568817,1.06978768047132,0.656804715599566,1.10195093839151,1.18009283054671,2.68680578668049,1.23852898652861,0.919421224478927,0,0,0.309868802321207,0.568676929949686,0.293600439334847,2.21598163412751,2.4065333696417,2.82114131930607,2.01523926815932,6.47787332037959,3.09090681161024,0.290796477559129,0,0.485168122375632,0.464858073811369,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,0,0,1.60464513538047,0.639337125799041,0.329851300186716,0.398927315243264,0,0.290209238628584,0.56738522469114,0,0,0,0.217188844705117,0.605399502633369,0,0.632924774881769,0.422510572623884,0,0,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0,5.27988733383968,8.7382177801941,8.89509253863555,7.25441378363062,6.4063357925762,10.3455439191807,11.2377628373427,7.63243003628291,4.55370375287559,5.87237189370939,7.64546456250458,2.64342657158052,3.36305137788922,1.31692042387539,13.7696839079683,7.8602152549833,6.99045096598331,6.68745981562712,9.12582346574053,13.2565385605725,9.74133642039557,0.557052284425868,7.36514768687093,5.98141515375777,8.6657236404805,1.79327847615945,1.04047478047903,2.30213066445147,2.76350017785848,6.0858648004361,14.0872235003957,18.1927763101005,20.9071047609954,1.69964014046349,6.89796888483458,8.24705869158312,10.8798467568386,12.4240511586398,15.626002892554,15.207232711174,11.895434407144,17.4061791170009,11.2437653897111,14.206635122641,12.3169199538157,11.0883708773603,5.34880391567015,9.55841065626473,0,0,0.12786256184353,0,0.50133791063589,0.579386075843295,1.5905718941022,1.45990461090791,0.378139268656271,0.221729397462564,0.263504357079378,5.04269440666194,0.364295288292542,0,3.24547393654683,1.21890816109487,1.59549552622638,10.0166062208244,2.85997455390064,10.7722675385574,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0,0.633152558322899,1.45650098894541,0.573673241497627,0,0,0,0.24666754841716,1.24484414159907,0.404132016209064,0.326923806226917,0.454072282934794,0,0,0.312160076830321,0,0.149448680551801,0.352303495931295,0.323745888736263,0.421352420106746,0.61246251376468,0,0.826606249406124,0,0.494533858557114,0,0,0.673344455816265,0.125118519871964,1.10825646193673,0,0,0.150238058906597,0.113432183160021,0.717558542755448,1.06778694409284,0.211931901159562,1.50045548042201,0.103052529238439,0.515281080091258,0.37223371266318,1.35021065793013,0.194874010322397,1.26216887122057,0.920498986422993,4.36444353410792,1.06502877754984,0.503760491138201,0.169560592310488,0.193260853163297,0.272746120590835,0.573609190778008,0,0,0.116193942869518,0.414644220061482,0,0,0,0.643240938192885,0,1.39310378409594,0.721879481669586,0.354920400119532,0.337169380156203,0.964044119533928,0.661763836394364,0.435758888184812,0,0.269662616320329,0.588664395376038,0,0,0,0,0,2.53510069643662,0.982827216677626,0.590789906681404,1.32438929824395,0.737930631258681,0.171567810298526,0.109750285408626,0,0.502644862058154,0.0925884451585296,0,0,0,0.579652024875384,0.117408694235822,0.288732895522148,0,0,0,0,1.47730203652438,0.468008530278475,0.594524649154913,1.87467667973554,1.00789276919316,0.141775097242386,0.0895585227028483,0.290633938513962,0.383382679165211,13.3019074231905,6.51558411697873,9.12243708379397,10.6648765528551,8.07951573928832,0.698476837213859,0,0,1.71072446022705,0.616964956219941,0,0.285826432630578,0.224262168690721,0,0.51336800074665,1.03417372606222,0,0,0,0,0.771622122786426,0,0,0.857867961948885,0.542621605391443,0,0,0,0,1.20575750823834,0.871533458600294,0.299918973546171,1.2162378064119,1.50677127429638,0,0.239624855491583,1.14861935834114,0,1.44781306667579,0.61642896765115,0.537182889719687,0,8.86638420908672,5.82194452120697,6.54549485026717,1.01637849688985,7.8083912314573,8.50617694055465,7.70574820538004,8.93114252314428,0.749007023947182,0,0.414415513436035,1.10422342547226,0,0,1.03985430765404,0.713715955188647,0.157702415033935,1.17141414992713,1.20378439891088,2.27407504055985,0,0,0.184369168541703,1.39013783148933,0.587403472388222,0,11.1654734106359,7.33428282783297,5.44310544797566,0.909382714338778,0,0,0.992431231275107,1.84154367945675,0.841980283299221,0.256278298511402,0.511707249066704,1.12597744800525,1.48418066444991,0.154209693802656,0,0.164254312027618,0.519254429183621,0.348631135379878,0.120859449591622,0.40101294060657,0.276242966807689,0.229628896329213,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0,0,0,0,3.91555844261345,0.732555718546747,0.82509499920588,0,0,0,0.193341436584244,0.462145851343933,0,0.137836572484531,0.859361958946189,0.290033387828457,0.255679882248303,0.267096106940212,0.330569830721956,0,0.638063562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| |||
|short_description=p1@ZNF540 | |||
}} |
Revision as of 23:03, 20 January 2014
Short description: | p1@ZNF540 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF540_5end |
Coexpression cluster: | C652_cerebellum_occipital_pineal_pituitary_medial_parietal_amygdala |
Association with transcript: | 0bp_to_uc002ogu.2, uc010efq.2_5end |
EntrezGene: | ZNF540 |
HGNC: | 25331 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.08e-11 | 18 |
alpha-beta T cell | 4.08e-11 | 18 |
immature T cell | 4.08e-11 | 18 |
mature T cell | 4.08e-11 | 18 |
immature alpha-beta T cell | 4.08e-11 | 18 |
lymphoid lineage restricted progenitor cell | 7.29e-10 | 52 |
lymphocyte | 1.91e-09 | 53 |
common lymphoid progenitor | 1.91e-09 | 53 |
CD8-positive, alpha-beta T cell | 6.04e-09 | 11 |
T cell | 2.19e-08 | 25 |
pro-T cell | 2.19e-08 | 25 |