FFCP PHASE1:Hg19::chr2:27651478..27651507,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29959 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7993 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UHY1 | |||
|association_with_transcript=0bp_to_ENST00000379852_5end | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_1_at_NRBP1_5end | |||
|id=chr2:27651478..27651507,+ | |||
|ontology_enrichment_celltype=CL:0000144!3.44e-25!625;CL:0000548!3.51e-23!679;CL:0000004!3.51e-23!679;CL:0000255!3.51e-23!679;CL:0002371!9.57e-23!591;CL:0000012!4.99e-22!682;CL:0002321!9.57e-19!248;CL:0000220!1.49e-18!246;CL:0000222!2.45e-16!119;CL:0000003!3.12e-14!722;CL:0000055!1.25e-13!180;CL:0000183!1.73e-10!59;CL:0000063!1.30e-09!578;CL:0000680!9.07e-09!57;CL:0000056!9.07e-09!57;CL:0000355!9.07e-09!57;CL:0002078!1.28e-08!44;CL:0000187!1.29e-08!54;CL:0000192!1.75e-08!42;CL:0000514!1.75e-08!42;CL:0000066!4.80e-08!254;CL:0000115!7.92e-08!35;CL:0000359!2.13e-07!32;CL:0000213!2.65e-07!57;CL:0000215!2.65e-07!57;CL:0002139!5.50e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.94e-08;19!CL:0002139;5.14e-07;24!CL:0000359;6.62e-07;32!CL:0000115;8.16e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.92e-19,250;CL:0000222,1.73e-16,121;CL:0000680,7.95e-09,58;CL:0000056,7.95e-09,58;CL:0000355,7.95e-09,58;CL:0000187,1.14e-08,55;CL:0002078,1.15e-08,45;CL:0000192,1.59e-08,43;CL:0000514,1.59e-08,43;CL:0000349,3.10e-08,19;CL:0000066,5.70e-08,253;CL:0000115,7.27e-08,36;CL:0000359,2.13e-07,32;CL:0000213,2.29e-07,58;CL:0000215,2.29e-07,58;CL:0002139,5.50e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.47e-14!79;UBERON:0007798!4.47e-14!79;UBERON:0003914!6.51e-12!118;UBERON:0000926!1.89e-11!448;UBERON:0004120!1.89e-11!448;UBERON:0006603!1.89e-11!448;UBERON:0000055!4.00e-11!69;UBERON:0000468!4.49e-10!659;UBERON:0004872!4.64e-10!84;UBERON:0001981!7.72e-10!60;UBERON:0007500!7.72e-10!60;UBERON:0004537!7.72e-10!60;UBERON:0006965!7.72e-10!60;UBERON:0000490!8.69e-10!138;UBERON:0004535!8.76e-10!110;UBERON:0005256!1.69e-09!143;UBERON:0001009!1.99e-09!113;UBERON:0000486!1.10e-08!82;UBERON:0001637!1.11e-08!42;UBERON:0003509!1.11e-08!42;UBERON:0004572!1.11e-08!42;UBERON:0002100!1.68e-08!216;UBERON:0001134!3.57e-08!61;UBERON:0002036!3.57e-08!61;UBERON:0003082!3.57e-08!61;UBERON:0003081!3.93e-08!216;UBERON:0005631!5.26e-08!14;UBERON:0000158!5.26e-08!14;UBERON:0002385!6.80e-08!63;UBERON:0001015!6.80e-08!63;UBERON:0000383!6.80e-08!63;UBERON:0000914!1.22e-07!83;UBERON:0002329!1.22e-07!83;UBERON:0003077!1.22e-07!83;UBERON:0003059!1.22e-07!83;UBERON:0007282!1.22e-07!83;UBERON:0009618!1.22e-07!83;UBERON:0007285!1.22e-07!83;UBERON:0004290!1.84e-07!70;UBERON:0000467!4.82e-07!625;UBERON:0000480!8.40e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;6.44e-07;56!UBERON:0001981;6.44e-07;56!UBERON:0004537;6.44e-07;56!UBERON:0002049;8.52e-07;75!UBERON:0007798;8.52e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,3.84e-14,78;UBERON:0007798,3.84e-14,78;UBERON:0003914,7.76e-12,117;UBERON:0000926,2.10e-11,315;UBERON:0004120,2.10e-11,315;UBERON:0006603,2.10e-11,315;UBERON:0000055,3.52e-11,68;UBERON:0004872,4.34e-10,83;UBERON:0007500,6.77e-10,59;UBERON:0001981,6.77e-10,59;UBERON:0004537,6.77e-10,59;UBERON:0006965,6.77e-10,59;UBERON:0004535,8.56e-10,109;UBERON:0000490,1.63e-09,148;UBERON:0001009,1.96e-09,112;UBERON:0000486,9.40e-09,83;UBERON:0001637,1.11e-08,42;UBERON:0003509,1.11e-08,42;UBERON:0004572,1.11e-08,42;UBERON:0002100,1.52e-08,199;UBERON:0007503,1.58e-08,78;UBERON:0001134,3.09e-08,62;UBERON:0002036,3.09e-08,62;UBERON:0003082,3.09e-08,62;UBERON:0003104,3.53e-08,160;UBERON:0009142,3.53e-08,160;UBERON:0005631,5.26e-08,14;UBERON:0000158,5.26e-08,14;UBERON:0002385,5.86e-08,64;UBERON:0001015,5.86e-08,64;UBERON:0000383,5.86e-08,64;UBERON:0005256,6.73e-08,122;UBERON:0003081,8.04e-08,203;UBERON:0002329,1.58e-07,71;UBERON:0003059,1.58e-07,71;UBERON:0007282,1.58e-07,71;UBERON:0004290,1.58e-07,71;UBERON:0009618,1.58e-07,71;UBERON:0007524,2.05e-07,73;UBERON:0003077,3.28e-07,72;UBERON:0007285,3.28e-07,72;UBERON:0002204,3.76e-07,167 | |||
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| |||
|short_description=p1@NRBP1 | |||
}} |
Revision as of 02:16, 21 January 2014
Short description: | p1@NRBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NRBP1_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 0bp_to_ENST00000379852_5end |
EntrezGene: | NRBP1 |
HGNC: | 7993 |
UniProt: | Q9UHY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.92e-19 | 250 |
mesodermal cell | 1.73e-16 | 121 |
muscle precursor cell | 7.95e-09 | 58 |
myoblast | 7.95e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.95e-09 | 58 |
muscle cell | 1.14e-08 | 55 |
meso-epithelial cell | 1.15e-08 | 45 |
smooth muscle cell | 1.59e-08 | 43 |
smooth muscle myoblast | 1.59e-08 | 43 |
extraembryonic cell | 3.10e-08 | 19 |
epithelial cell | 5.70e-08 | 253 |
endothelial cell | 7.27e-08 | 36 |
vascular associated smooth muscle cell | 2.13e-07 | 32 |
lining cell | 2.29e-07 | 58 |
barrier cell | 2.29e-07 | 58 |
endothelial cell of vascular tree | 5.50e-07 | 24 |