FFCP PHASE1:Hg19::chr2:233497961..233497995,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80303 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29556 | |||
|TSSclassifier=strong | |||
|UniProt=B4DEE0 | |||
|association_with_transcript=0bp_to_ENST00000540187_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_EFHD1_5end | |||
|id=chr2:233497961..233497995,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.41e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,7.38e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.74e-16;82!UBERON:0006215;2.18e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.30e-72!115;UBERON:0001049!9.85e-45!57;UBERON:0005068!9.85e-45!57;UBERON:0006241!9.85e-45!57;UBERON:0007135!9.85e-45!57;UBERON:0001017!7.59e-39!82;UBERON:0005743!1.47e-37!86;UBERON:0000955!8.50e-37!69;UBERON:0006238!8.50e-37!69;UBERON:0002616!1.59e-36!59;UBERON:0000073!1.99e-34!94;UBERON:0001016!1.99e-34!94;UBERON:0003080!1.00e-33!42;UBERON:0003075!6.97e-33!86;UBERON:0007284!6.97e-33!86;UBERON:0002780!1.04e-32!41;UBERON:0001890!1.04e-32!41;UBERON:0006240!1.04e-32!41;UBERON:0002346!1.97e-30!90;UBERON:0002020!1.59e-26!34;UBERON:0003528!1.59e-26!34;UBERON:0001893!1.64e-26!34;UBERON:0002791!1.80e-25!33;UBERON:0001869!3.20e-24!32;UBERON:0003056!2.45e-22!61;UBERON:0000153!3.37e-20!129;UBERON:0007811!3.37e-20!129;UBERON:0004121!3.39e-20!169;UBERON:0000033!9.03e-20!123;UBERON:0000924!3.82e-19!173;UBERON:0006601!3.82e-19!173;UBERON:0002619!1.40e-18!22;UBERON:0000956!6.05e-17!25;UBERON:0000203!6.05e-17!25;UBERON:0001950!1.72e-16!20;UBERON:0003076!7.78e-12!15;UBERON:0003057!7.78e-12!15;UBERON:0002308!1.58e-11!9;UBERON:0000125!1.58e-11!9;UBERON:0002420!2.55e-11!9;UBERON:0007245!2.55e-11!9;UBERON:0010009!2.55e-11!9;UBERON:0010011!2.55e-11!9;UBERON:0000454!2.55e-11!9;UBERON:0000475!1.53e-10!365;UBERON:0002298!2.28e-10!8;UBERON:0004732!3.90e-10!13;UBERON:0000064!2.04e-09!219;UBERON:0009663!2.60e-09!7;UBERON:0004733!5.00e-09!12;UBERON:0002028!5.00e-09!12;UBERON:0007277!5.00e-09!12;UBERON:0000025!8.36e-09!194;UBERON:0000062!9.38e-09!511;UBERON:0000200!5.13e-08!6;UBERON:0001894!1.33e-07!7;UBERON:0006222!1.33e-07!7;UBERON:0004111!5.93e-07!241;UBERON:0000349!7.87e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.10e-41;34!UBERON:0003528;1.64e-40;34!UBERON:0002020;1.64e-40;34!UBERON:0002791;1.98e-39;32!UBERON:0001869;3.22e-39;32!UBERON:0002780;3.83e-39;41!UBERON:0001890;3.83e-39;41!UBERON:0000073;1.86e-38;53!UBERON:0002616;1.86e-38;53!UBERON:0002619;2.93e-34;22!UBERON:0001950;4.22e-30;20!UBERON:0000956;1.23e-29;25!UBERON:0000203;1.23e-29;25!UBERON:0000955;9.65e-27;68!UBERON:0001017;1.12e-24;75!UBERON:0007023;8.10e-24;114!UBERON:0000125;1.52e-21;9!UBERON:0002308;1.52e-21;9!UBERON:0002420;4.44e-21;9!UBERON:0007245;4.44e-21;9!UBERON:0010009;4.44e-21;9!UBERON:0010011;4.44e-21;9!UBERON:0000454;4.44e-21;9!UBERON:0001016;2.72e-19;83!UBERON:0009663;4.25e-17;7!UBERON:0004732;4.61e-17;13!UBERON:0004733;6.80e-15;12!UBERON:0002028;6.80e-15;12!UBERON:0002298;7.57e-15;6!UBERON:0000200;1.79e-14;6!UBERON:0000349;4.66e-12;5!UBERON:0000369;4.91e-10;4!UBERON:0002435;4.91e-10;4!UBERON:0000204;4.91e-10;4!UBERON:0002784;1.53e-09;4!UBERON:0002680;4.78e-09;9!UBERON:0001895;4.78e-09;9!UBERON:0001871;1.41e-08;6!UBERON:0002021;1.71e-08;5!UBERON:0001894;2.60e-08;7!UBERON:0001872;2.71e-08;5!UBERON:0000988;2.73e-08;3!UBERON:0001896;3.08e-08;3!UBERON:0005290;3.08e-08;3!UBERON:0001870;4.20e-08;3!UBERON:0005383;6.64e-08;3!UBERON:0005382;6.64e-08;3!UBERON:0011216;9.33e-08;132!UBERON:0003124;6.41e-07;3!UBERON:0000920;6.41e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.32e-78,114;UBERON:0001049,8.93e-73,56;UBERON:0005068,8.93e-73,56;UBERON:0006241,8.93e-73,56;UBERON:0007135,8.93e-73,56;UBERON:0000073,6.65e-70,53;UBERON:0002616,6.65e-70,53;UBERON:0000955,1.55e-59,68;UBERON:0006238,1.55e-59,68;UBERON:0001017,7.93e-56,81;UBERON:0002780,1.39e-55,41;UBERON:0001890,1.39e-55,41;UBERON:0003080,1.39e-55,41;UBERON:0006240,1.39e-55,41;UBERON:0003075,4.80e-53,82;UBERON:0007284,4.80e-53,82;UBERON:0001016,1.57e-51,89;UBERON:0002346,5.88e-50,86;UBERON:0003528,9.69e-49,34;UBERON:0002020,9.69e-49,34;UBERON:0001893,1.03e-48,34;UBERON:0002791,2.22e-44,32;UBERON:0001869,3.78e-44,32;UBERON:0003056,3.06e-39,61;UBERON:0010371,5.43e-39,104;UBERON:0002619,2.50e-34,22;UBERON:0001950,3.82e-30,20;UBERON:0000956,1.07e-29,25;UBERON:0000203,1.07e-29,25;UBERON:0010314,1.80e-29,132;UBERON:0004121,5.02e-25,171;UBERON:0000924,5.02e-25,171;UBERON:0006601,5.02e-25,171;UBERON:0000125,1.49e-21,9;UBERON:0002308,1.49e-21,9;UBERON:0002420,3.91e-21,9;UBERON:0007245,3.91e-21,9;UBERON:0010009,3.91e-21,9;UBERON:0010011,3.91e-21,9;UBERON:0000454,3.91e-21,9;UBERON:0003076,1.52e-17,15;UBERON:0003057,1.52e-17,15;UBERON:0009663,4.21e-17,7;UBERON:0004732,4.35e-17,13;UBERON:0011216,9.93e-17,223;UBERON:0004733,6.42e-15,12;UBERON:0002028,6.42e-15,12;UBERON:0007277,6.42e-15,12;UBERON:0002298,7.41e-15,6;UBERON:0000200,1.65e-14,6;UBERON:0000025,3.64e-14,192;UBERON:0000349,3.84e-12,5;UBERON:0004111,3.36e-10,240;UBERON:0000369,4.80e-10,4;UBERON:0002435,4.80e-10,4;UBERON:0000204,4.80e-10,4;UBERON:0010082,4.80e-10,4;UBERON:0002784,1.85e-09,4;UBERON:0002680,4.61e-09,9;UBERON:0001895,4.61e-09,9;UBERON:0010092,4.61e-09,9;UBERON:0001871,1.28e-08,6;UBERON:0002021,1.75e-08,5;UBERON:0001872,2.59e-08,5;UBERON:0000988,2.73e-08,3;UBERON:0001894,2.97e-08,7;UBERON:0006222,2.97e-08,7;UBERON:0001896,3.01e-08,3;UBERON:0005290,3.01e-08,3;UBERON:0010096,3.01e-08,3;UBERON:0001870,4.40e-08,3;UBERON:0005383,6.57e-08,3;UBERON:0005382,6.57e-08,3;UBERON:0000483,4.41e-07,306;UBERON:0000119,6.69e-07,309;UBERON:0000920,7.38e-07,3 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.704772020479856,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,4.71524671791765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0.103325781175765,0,0,0,0,0,0.250237039743928,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,4.29243081047436,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.190493682876507,0,3.51652341630141,0,1.02827492703324,0,2.00078502841405,0,0,0,0,0,0,1.86156681609409,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.535286966391485,0.788512075169673,0.35142424497814,0,0,2.0694614258501,0,0,0,1.37060810223918,1.37257369524342,0,0,0,0,0,0.30239029332968,0,0.767309866440312,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.812839312631559,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,1.64865618636356,0.915694648183434,0.907604499126468,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0.23874448473769,0.296964680832639,0,2.98244294329889,21.663090127219,0,0,0.211125408127993,3.58646378851925,0.552567831062295,0,0,0,0.311039587661807,0,0,0,0.887790650732402,0,0,8.72399471485697,21.9860392643587,3.99227596002388,1.30213880542617,0.524759999977174,5.79999660347835,0,0,0,0,0,0,7.08593108651071,11.4566616694138,9.15490417902499,3.64911557773041,2.36438095162838,4.60709334023342,0,0,3.61666214967846,0,0.23056390438806,0.359030577639089,0.108647371922008,3.50901275705111,2.28993983504656,1.06606955203727,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.884575645033392,0.611030144933625,0,0,0,38.7556514638893,0,26.7061468126887,0,0,0,0.394584402849391,0,0,0.695052375913368,0.450970258243478,0.207376382794494,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.484945082442097,0,0.677942222341597,0,0,11.0793892922788,0,0,0.640358984218058,0,0,0.114536596165916,0,0,0,0,0,0,0.203996435272644,0,24.0168115483916,79.9527412729239,0,0,0,0.279282401272254,0.687481272035051,1.43574604915363,0.798716001995964,2.14613024068285,2.4548860318606,0.470284307407084,0,0,0,0,0,0.984274815147488,0,4.77137813885582,28.7389186895425,0.160753148465019,0.137539436597234,0,0,0,6.74320078904074,0,3.07342258466873,3.82918493385486,0,0,0,0.714695326373367,0.662091970365432,0.25426853765475,0.542999601753713,0,0,0,0,0,0,0.879313402068495,0,9.82550468347784,43.9012237785731,0,0,0.854299300541557,0,0.414239055347196,0,0,0,0,0.544017803369474,1.0027595760908,0.612691153526923,0.327872630709804,0.471162288750703,4.43034089983493,5.97928698019619,33.300787567929,6.88091034828085,39.7126004501931,13.2886302294561,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0.256241518587947,0,0.303859956177382,41.3392724093675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,10.6620513660123,11.3357261060468,43.5800435226023,15.7939600465381,0.504143392443436,14.5230230174858,14.6942837524984,54.2523796984787,0,0,0,0,0,0,0,5.94161593959132,0,0,0,0,0,9.99556252352241,10.15401528198,27.6960307311587,14.7124679649864,0,0.548257766857182,1.98484471355718,0,0.127762427639595,1.07140367175657,1.00885116665647,0.606965604236632,0.227662191351298,2.30626162422861,0,0,11.2150059411772,9.99746158155306,0,0.111231401892069,1.02041020705668,6.59885477647208,0,0,0,0,3.21644448794954,0.632054446930906,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,3.23714418593947,0.821302454849976,2.3196288626764,0.485710993059139,0,2.38740930193642,0,0,0,0,0.694567422971502,0.218559560503957,0,0.245148321753905,0,9.22649795440243,28.2194080310732,0.8453114551668,0,1.4097587696978,0.773494655682926,0,0,0,0,2.19100916473955,0,75.1099415713605,0,12.8503916460829,0,0,0,0,0,0,0.218531143927391,0,0.203977659483963,0,0.0918948995348449,0.50141507858475,4.39516449665789,2.94760543171796,24.8750831837634,76.5404169378025,0.426467963801962,0.714193294391221,0,0.186224142887574,0,0.572824424503484,0.404234377916439,0.653150243690884,0,0.134704106029175,0.502055437748735,0,0.0814032686109745,0,0,0.0898252021065869,0,3.54500188130313,0.406896178315738,1.33151354837103,0.201273793591026,0 | |||
|short_description=p2@EFHD1 | |||
}} |
Revision as of 09:14, 21 January 2014
Short description: | p2@EFHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EFHD1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000540187_5end |
EntrezGene: | EFHD1 |
HGNC: | 29556 |
UniProt: | B4DEE0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 7.38e-07 | 3 |