FFCP PHASE1:Hg19::chrX:50386648..50386697,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57477 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29215 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000460112,uc004dpf.1_5end | |||
|coexpression_cluster_id=C2447 | |||
|description=CAGE_peak_2_at_SHROOM4_5end | |||
|id=chrX:50386648..50386697,- | |||
|ontology_enrichment_celltype=CL:0002139!2.24e-28!24;CL:0000115!4.17e-26!35;CL:0000071!3.22e-21!18;CL:0002546!3.22e-21!18;CL:0002078!2.09e-18!44;CL:0000213!2.27e-13!57;CL:0000215!2.27e-13!57;CL:1000413!1.46e-11!9;CL:0005020!1.04e-08!6;CL:0002138!1.04e-08!6;CL:0005022!1.04e-08!6;CL:0002543!2.17e-08!6;CL:0002544!2.33e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.77e-32;24!CL:0000115;1.54e-26;36!CL:0000071;8.59e-24;18!CL:0002078;1.37e-14;45!CL:1000413;6.64e-13;9!CL:0000213;5.40e-10;58!CL:0000215;5.40e-10;58!CL:0002138;1.21e-09;6!CL:0002543;2.75e-09;6!CL:0002544;2.97e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.55e-32,24;CL:0000115,4.20e-31,36;CL:0000071,8.39e-24,18;CL:0002546,8.39e-24,18;CL:0002078,1.38e-22,45;CL:0000213,4.11e-15,58;CL:0000215,4.11e-15,58;CL:1000413,7.12e-13,9;CL:0005020,1.20e-09,6;CL:0002138,1.20e-09,6;CL:0005022,1.20e-09,6;CL:0002543,2.75e-09,6;CL:0002544,2.98e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002546;8.59e-24;18!UBERON:0006601;1.15e-09;82!CL:0005022;1.21e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.90e-69!115;UBERON:0004111!6.75e-30!241;UBERON:0001049!3.28e-28!57;UBERON:0005068!3.28e-28!57;UBERON:0006241!3.28e-28!57;UBERON:0007135!3.28e-28!57;UBERON:0000025!3.64e-27!194;UBERON:0000477!1.16e-25!286;UBERON:0003080!2.09e-23!42;UBERON:0002616!8.27e-23!59;UBERON:0002780!2.45e-22!41;UBERON:0001890!2.45e-22!41;UBERON:0006240!2.45e-22!41;UBERON:0002346!1.53e-21!90;UBERON:0001986!3.22e-21!18;UBERON:0004638!3.22e-21!18;UBERON:0004852!3.22e-21!18;UBERON:0003075!5.64e-21!86;UBERON:0007284!5.64e-21!86;UBERON:0001017!2.03e-19!82;UBERON:0000955!3.11e-19!69;UBERON:0006238!3.11e-19!69;UBERON:0005743!6.39e-19!86;UBERON:0002020!1.04e-18!34;UBERON:0003528!1.04e-18!34;UBERON:0001893!3.17e-18!34;UBERON:0002791!1.19e-17!33;UBERON:0001869!4.88e-17!32;UBERON:0000073!1.27e-16!94;UBERON:0001016!1.27e-16!94;UBERON:0000487!4.32e-16!22;UBERON:0002619!1.12e-14!22;UBERON:0003056!1.57e-14!61;UBERON:0000483!3.67e-14!309;UBERON:0000119!9.72e-14!312;UBERON:0006914!2.33e-13!25;UBERON:0001950!3.28e-13!20;UBERON:0000956!3.09e-12!25;UBERON:0000203!3.09e-12!25;UBERON:0003915!1.46e-11!9;UBERON:0004700!1.46e-11!9;UBERON:0001917!1.46e-11!9;UBERON:0000153!3.04e-11!129;UBERON:0007811!3.04e-11!129;UBERON:0000055!4.97e-11!69;UBERON:0004872!3.37e-10!84;UBERON:0000033!5.60e-10!123;UBERON:0000468!9.68e-10!659;UBERON:0001009!1.95e-09!113;UBERON:0000924!3.03e-09!173;UBERON:0006601!3.03e-09!173;UBERON:0002049!7.12e-09!79;UBERON:0007798!7.12e-09!79;UBERON:0004121!9.62e-09!169;UBERON:0000467!1.94e-08!625;UBERON:0000480!2.34e-08!626;UBERON:0002308!2.81e-08!9;UBERON:0000125!2.81e-08!9;UBERON:0002298!3.48e-08!8;UBERON:0002420!3.71e-08!9;UBERON:0007245!3.71e-08!9;UBERON:0010009!3.71e-08!9;UBERON:0010011!3.71e-08!9;UBERON:0000454!3.71e-08!9;UBERON:0004535!5.53e-08!110;UBERON:0001981!6.36e-08!60;UBERON:0007500!6.36e-08!60;UBERON:0004537!6.36e-08!60;UBERON:0006965!6.36e-08!60;UBERON:0000064!6.47e-08!219;UBERON:0003914!6.67e-08!118;UBERON:0003103!1.93e-07!69;UBERON:0002465!2.17e-07!10;UBERON:0001871!4.85e-07!7;UBERON:0000481!6.32e-07!347;UBERON:0001638!8.23e-07!9;UBERON:0003920!8.23e-07!9;UBERON:0004582!8.23e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.59e-24;18!UBERON:0001986;8.59e-24;18!UBERON:0004852;8.59e-24;18!UBERON:0000487;2.88e-18;22!UBERON:0007023;8.23e-18;114!UBERON:0002780;6.68e-16;41!UBERON:0001890;6.68e-16;41!UBERON:0003528;1.45e-15;34!UBERON:0002020;1.45e-15;34!UBERON:0006914;2.60e-15;25!UBERON:0001893;7.08e-15;34!UBERON:0000073;8.78e-15;53!UBERON:0002616;8.78e-15;53!UBERON:0002791;1.38e-14;32!UBERON:0001869;1.47e-14;32!UBERON:0002619;1.89e-13;22!UBERON:0003915;6.64e-13;9!UBERON:0004700;6.64e-13;9!UBERON:0001917;6.64e-13;9!UBERON:0001950;7.38e-12;20!UBERON:0000956;2.80e-11;25!UBERON:0000203;2.80e-11;25!UBERON:0000490;2.04e-09;33!UBERON:0000125;3.29e-09;9!UBERON:0002308;3.29e-09;9!UBERON:0001017;4.61e-09;75!UBERON:0002420;5.45e-09;9!UBERON:0007245;5.45e-09;9!UBERON:0010009;5.45e-09;9!UBERON:0010011;5.45e-09;9!UBERON:0000454;5.45e-09;9!UBERON:0000955;1.64e-08;68!UBERON:0002465;3.55e-08;10!UBERON:0001638;1.24e-07;9!UBERON:0003920;1.24e-07;9!UBERON:0004582;1.24e-07;9!UBERON:0001016;1.34e-07;83!UBERON:0009663;2.67e-07;7!UBERON:0002298;5.05e-07;6!UBERON:0001473;6.84e-07;8!UBERON:0004536;6.84e-07;8!UBERON:0006558;6.84e-07;8!UBERON:0000055;9.91e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.99e-69,114;UBERON:0004111,2.71e-29,240;UBERON:0001049,2.84e-28,56;UBERON:0005068,2.84e-28,56;UBERON:0006241,2.84e-28,56;UBERON:0007135,2.84e-28,56;UBERON:0000025,3.30e-26,192;UBERON:0000073,4.13e-26,53;UBERON:0002616,4.13e-26,53;UBERON:0004638,8.39e-24,18;UBERON:0001986,8.39e-24,18;UBERON:0004852,8.39e-24,18;UBERON:0002780,1.63e-22,41;UBERON:0001890,1.63e-22,41;UBERON:0003080,1.63e-22,41;UBERON:0006240,1.63e-22,41;UBERON:0002346,5.49e-22,86;UBERON:0003075,2.88e-21,82;UBERON:0007284,2.88e-21,82;UBERON:0000955,1.71e-19,68;UBERON:0006238,1.71e-19,68;UBERON:0001017,3.22e-19,81;UBERON:0003528,1.92e-18,34;UBERON:0002020,1.92e-18,34;UBERON:0000487,2.82e-18,22;UBERON:0001893,6.22e-18,34;UBERON:0010314,1.75e-17,132;UBERON:0001016,5.42e-17,89;UBERON:0002791,1.20e-16,32;UBERON:0001869,1.29e-16,32;UBERON:0006914,2.56e-15,25;UBERON:0010371,1.25e-14,104;UBERON:0003056,3.14e-14,61;UBERON:0000483,7.93e-14,306;UBERON:0002619,1.47e-13,22;UBERON:0000119,1.92e-13,309;UBERON:0003915,7.12e-13,9;UBERON:0004700,7.12e-13,9;UBERON:0001917,7.12e-13,9;UBERON:0000055,3.01e-12,68;UBERON:0001950,5.89e-12,20;UBERON:0000956,2.25e-11,25;UBERON:0000203,2.25e-11,25;UBERON:0011216,6.24e-11,223;UBERON:0002049,1.95e-09,78;UBERON:0007798,1.95e-09,78;UBERON:0000125,3.68e-09,9;UBERON:0002308,3.68e-09,9;UBERON:0004872,4.71e-09,83;UBERON:0002420,5.04e-09,9;UBERON:0007245,5.04e-09,9;UBERON:0010009,5.04e-09,9;UBERON:0010011,5.04e-09,9;UBERON:0000454,5.04e-09,9;UBERON:0001009,5.09e-09,112;UBERON:0004121,8.75e-09,171;UBERON:0000924,8.75e-09,171;UBERON:0006601,8.75e-09,171;UBERON:0007500,1.22e-08,59;UBERON:0001981,1.22e-08,59;UBERON:0004537,1.22e-08,59;UBERON:0006965,1.22e-08,59;UBERON:0002465,2.74e-08,10;UBERON:0003103,1.22e-07,68;UBERON:0001638,1.23e-07,9;UBERON:0003920,1.23e-07,9;UBERON:0004582,1.23e-07,9;UBERON:0004535,1.68e-07,109;UBERON:0002050,1.78e-07,564;UBERON:0000923,2.39e-07,560;UBERON:0010316,2.39e-07,560;UBERON:0005291,2.39e-07,560;UBERON:0006598,2.39e-07,560;UBERON:0010317,2.39e-07,560;UBERON:0002532,2.39e-07,560;UBERON:0009663,3.13e-07,7;UBERON:0000922,3.27e-07,592;UBERON:0005423,3.81e-07,581;UBERON:0002298,4.22e-07,6;UBERON:0003914,4.24e-07,117;UBERON:0003076,5.13e-07,15;UBERON:0003057,5.13e-07,15;UBERON:0001473,6.80e-07,8;UBERON:0004536,6.80e-07,8;UBERON:0006558,6.80e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77408061658038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.02290049474824,0,0,0,0,0,0,0,0.175669571386252,7.13835961462534,0,0,0,0,0,0,0,0,15.7022301819697,10.3228151412735,27.4240996269999,16.9592382577203,7.55098985177831,15.6817283905838,17.1375872560185,32.3020948961661,33.086262429864,38.8275910807018,12.8905381474927,3.80136052859256,8.7862340717341,15.4418493745265,16.2028389576352,24.2895260932697,21.7793491447385,26.8015323550307,4.5994991239765,25.6301728083395,17.2209639294583,0,0,0,0,0,0,0,0,0,7.47242970107935,0.24666754841716,0,0.942974704487816,1.14423332179421,0,0,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.5262181849859,4.20725321410337,0,0,0,0,4.72631925345123,0,0,0,0,0,0,0,0,0,0,0,0,15.0141105671517,17.5934494779112,15.9813487877063,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,3.25736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.0813521062317,25.8542432020304,9.50030030849413,24.6763604304463,0,0,0,0,0,0,0,0,0,0,10.7162652113631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.92947049429925,0,0,0,0,0,0,0,0,0,0,0,0,12.5211255033116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3307196799782,0,0,20.9506696358808,0,0,0,0.71623345421307,0.593929361665277,0,6.95903353436409,1.96937182974718,0,0,0.211125408127993,4.38345574152353,3.03912307084262,0,0,0,0,0,0,0,3.25523238601881,0,0,7.75466196876175,1.48428957058962,0,0,0,22.4749868384786,0,0,0,0,0.583209226766509,0,3.54296554325536,2.05013945663194,1.52581736317083,1.76926815889959,0,1.75508317723178,0,0,6.69467248983034,0,0,0.448788222048861,0,5.10401855571071,1.55715908783166,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,2.12298154808014,1.83309043480088,0,0,0,1.61762719153625,8.82835412028668,1.1713222286267,0,0,0,3.15667522279512,3.62972148145992,0.91821828489147,4.10712767585172,0,0,0,0,0,0,0,0,0,0,0,5.2418000472609,0,0,0,0,3.10364852762942,0,5.42353777873278,0,0,1.7727022867646,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,2.19048606227189,0,0,0,18.1533560826965,11.6871816245959,30.1506670322262,6.19004901546872,9.87219910714113,13.3902874465124,16.191216869301,0,0,0,0,0,0,0,3.97614844904652,2.04305109167363,0,0,0,0,0,1.94398581305679,0,5.98923375473906,5.5601863423098,0,0,0,7.86164859010704,17.8764831998667,0,0,0,0,0,0,0,0,0.879313402068495,1.32506888912221,8.01554329441613,2.6446520348538,0,0,39.1909804123439,50.4625819369928,17.3980403245822,1.9846640872478,0,0,0,3.80812462358632,12.534494701135,6.43325711203269,4.59021682993726,0,0.886068179966986,3.05065662254908,1.752673029891,6.30750115259078,2.44043913381075,3.91207338530716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,3.31820246764154,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.2901469631498,0,1.98297222814403,0,0,0,0,0,0,2.11956442818316,0,2.87340946302872,2.05116364240755,1.26035848110859,1.45230230174858,1.45328081068666,5.71077681036618,0,0,0,0,0,0,0,3.38446477571658,0,0.781514011233092,0,0,0,1.48582686160468,2.34323429584154,1.86018116851066,1.71222687523548,1.09394961803644,1.64477330057155,11.4128571029538,0,0,1.07140367175657,1.3451348888753,1.82089681270989,1.13831095675649,7.89451094447486,0,0,2.17503145525861,1.38122824481983,0,0,3.3752029925721,4.39923651764805,0,2.73947616152849,0,0,7.93389640360885,0,0,0,0,0,0,0,0.860454717640555,0,0,4.23387050190929,0,0,0,0,0,0,9.06400372063053,5.85177999080608,4.6392577253528,3.88568794447312,0,0,0,0,0,0,1.31196068783506,1.74847648403166,0,3.43207650455468,0,4.51509474364374,1.18818560130834,1.2679671827502,0,0.375935671919414,1.22469987149797,0,0,0,0,3.65168194123259,1.83491713361816,1.72007499781742,0,1.22384682343646,0.436350690340377,3.1741610430924,0,0,0,0,0,0,0,0,0,0,3.03114792872958,1.33982065078089,2.48750831837634,1.86179392551411,7.67642334843531,3.80903090341985,0.516711278688049,2.17261500035503,0,2.48223917284843,7.88257036937055,9.14410341167238,5.13349951627922,1.68380132536469,5.95294304759214,4.9899053481902,0,0,0,0,4.69281884806909,10.8794885322751,4.47585796147312,7.98908129022615,5.63566622054873,0 | |||
|short_description=p2@SHROOM4 | |||
}} |
Revision as of 05:42, 23 January 2014
Short description: | p2@SHROOM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SHROOM4_5end |
Coexpression cluster: | C2447_Renal_lung_Endothelial_adipose_heart_Hepatic_mature |
Association with transcript: | 0bp_to_ENST00000460112, uc004dpf.1_5end |
EntrezGene: | SHROOM4 |
HGNC: | 29215 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.55e-32 | 24 |
endothelial cell | 4.20e-31 | 36 |
blood vessel endothelial cell | 8.39e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.39e-24 | 18 |
meso-epithelial cell | 1.38e-22 | 45 |
lining cell | 4.11e-15 | 58 |
barrier cell | 4.11e-15 | 58 |
endothelial cell of artery | 7.12e-13 | 9 |
lymphangioblast | 1.20e-09 | 6 |
endothelial cell of lymphatic vessel | 1.20e-09 | 6 |
vascular lymphangioblast | 1.20e-09 | 6 |
vein endothelial cell | 2.75e-09 | 6 |
aortic endothelial cell | 2.98e-09 | 6 |