FFCP PHASE1:Hg19::chr11:102661517..102661541,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:102661517..102661541,- | |||
|coexpression_cluster_id=C422 | |coexpression_cluster_id=C422 | ||
|description=CAGE_peak_at_chr11:102661517..102661541,- | |description=CAGE_peak_at_chr11:102661517..102661541,- | ||
|id=chr11:102661517..102661541,- | |id=chr11:102661517..102661541,- | ||
|ontology_enrichment_celltype=CL:0000359!1.57e-29!32;CL:0000192!1.17e-24!42;CL:0000514!1.17e-24!42;CL:0000055!1.63e-17!180;CL:0000187!2.20e-17!54;CL:0000183!1.26e-16!59;CL:0000680!4.67e-16!57;CL:0000056!4.67e-16!57;CL:0000355!4.67e-16!57;CL:0000222!2.80e-15!119;CL:0000393!7.20e-15!60;CL:0000211!7.20e-15!60;CL:0002539!6.82e-13!10;CL:0002494!1.14e-10!16;CL:0005020!2.69e-10!6;CL:0002138!2.69e-10!6;CL:0005022!2.69e-10!6;CL:0002139!8.14e-10!24;CL:0002594!4.94e-09!4;CL:0000220!6.45e-09!246;CL:0002321!9.75e-09!248;CL:0000057!3.86e-08!75;CL:1000306!4.32e-08!4;CL:0002547!4.32e-08!4;CL:0000048!9.18e-08!430;CL:0002592!1.77e-07!3;CL:0000723!2.10e-07!436;CL:0002595!2.72e-07!5;CL:0002371!3.60e-07!591;CL:0000548!4.56e-07!679;CL:0000004!4.56e-07!679;CL:0000255!4.56e-07!679;CL:0002551!5.50e-07!6;CL:0000034!6.05e-07!444;CL:0000012!6.38e-07!682;CL:0000115!8.27e-07!35 | |ontology_enrichment_celltype=CL:0000359!1.57e-29!32;CL:0000192!1.17e-24!42;CL:0000514!1.17e-24!42;CL:0000055!1.63e-17!180;CL:0000187!2.20e-17!54;CL:0000183!1.26e-16!59;CL:0000680!4.67e-16!57;CL:0000056!4.67e-16!57;CL:0000355!4.67e-16!57;CL:0000222!2.80e-15!119;CL:0000393!7.20e-15!60;CL:0000211!7.20e-15!60;CL:0002539!6.82e-13!10;CL:0002494!1.14e-10!16;CL:0005020!2.69e-10!6;CL:0002138!2.69e-10!6;CL:0005022!2.69e-10!6;CL:0002139!8.14e-10!24;CL:0002594!4.94e-09!4;CL:0000220!6.45e-09!246;CL:0002321!9.75e-09!248;CL:0000057!3.86e-08!75;CL:1000306!4.32e-08!4;CL:0002547!4.32e-08!4;CL:0000048!9.18e-08!430;CL:0002592!1.77e-07!3;CL:0000723!2.10e-07!436;CL:0002595!2.72e-07!5;CL:0002371!3.60e-07!591;CL:0000548!4.56e-07!679;CL:0000004!4.56e-07!679;CL:0000255!4.56e-07!679;CL:0002551!5.50e-07!6;CL:0000034!6.05e-07!444;CL:0000012!6.38e-07!682;CL:0000115!8.27e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.87e-64;32!CL:0000192;1.76e-37;43!CL:0002539;3.98e-29;10!CL:0002594;1.07e-18;4!CL:0000187;8.08e-18;55!CL:0002595;1.24e-15;5!CL:0000393;1.51e-15;61!CL:0000211;1.51e-15;61!CL:0002592;1.59e-15;3!CL:0002593;1.58e-10;2!CL:0002494;3.34e-10;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.96e-67,32;CL:0000192,6.91e-53,43;CL:0000514,6.91e-53,43;CL:0000187,3.83e-40,55;CL:0000680,8.82e-38,58;CL:0000056,8.82e-38,58;CL:0000355,8.82e-38,58;CL:0000393,1.19e-35,61;CL:0000211,1.19e-35,61;CL:0002539,2.39e-29,10;CL:0000222,9.20e-26,121;CL:0002594,3.95e-19,4;CL:0002595,1.32e-15,5;CL:0002592,1.75e-15,3;CL:0002321,7.35e-11,250;CL:0002593,1.83e-10,2;CL:0002494,3.51e-10,16;CL:0000048,3.67e-07,427;CL:0000723,5.93e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;1.76e-37;43!CL:0000355;3.46e-17;58 | |||
|ontology_enrichment_disease=DOID:2394!4.40e-07!14 | |ontology_enrichment_disease=DOID:2394!4.40e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:201;1.66e-07;6!DOID:0060100;1.66e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:201,1.74e-07,6;DOID:0060100,1.74e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001637!6.80e-42!42;UBERON:0003509!6.80e-42!42;UBERON:0004572!6.80e-42!42;UBERON:0000055!1.77e-35!69;UBERON:0004573!4.01e-33!33;UBERON:0004571!4.01e-33!33;UBERON:0004872!9.72e-31!84;UBERON:0001981!4.87e-30!60;UBERON:0007500!4.87e-30!60;UBERON:0004537!4.87e-30!60;UBERON:0006965!4.87e-30!60;UBERON:0002049!2.37e-29!79;UBERON:0007798!2.37e-29!79;UBERON:0004535!1.08e-26!110;UBERON:0001009!1.34e-25!113;UBERON:0003914!2.81e-20!118;UBERON:0000947!1.49e-18!21;UBERON:0010191!1.49e-18!21;UBERON:0004290!1.37e-17!70;UBERON:0000486!6.56e-16!82;UBERON:0001134!1.68e-14!61;UBERON:0002036!1.68e-14!61;UBERON:0003082!1.68e-14!61;UBERON:0000914!1.80e-14!83;UBERON:0002329!1.80e-14!83;UBERON:0003077!1.80e-14!83;UBERON:0003059!1.80e-14!83;UBERON:0007282!1.80e-14!83;UBERON:0009618!1.80e-14!83;UBERON:0007285!1.80e-14!83;UBERON:0002385!8.46e-14!63;UBERON:0001015!8.46e-14!63;UBERON:0000383!8.46e-14!63;UBERON:0004237!6.82e-13!10;UBERON:0004695!6.82e-13!10;UBERON:0002111!6.82e-13!10;UBERON:0004178!6.82e-13!10;UBERON:0004111!1.66e-11!241;UBERON:0000490!3.72e-10!138;UBERON:0000477!1.60e-09!286;UBERON:0001310!4.94e-09!4;UBERON:0005256!2.12e-08!143;UBERON:0000415!4.32e-08!4;UBERON:0007240!4.32e-08!4;UBERON:0005742!4.32e-08!4;UBERON:0005734!4.32e-08!4;UBERON:0004664!4.32e-08!4;UBERON:0004663!4.32e-08!4;UBERON:0000025!4.74e-08!194;UBERON:0001135!5.60e-08!15;UBERON:0000992!8.80e-08!13;UBERON:0000948!9.59e-08!24;UBERON:0005498!9.59e-08!24;UBERON:0004140!9.59e-08!24;UBERON:0009881!9.59e-08!24;UBERON:0004141!9.59e-08!24;UBERON:0003084!9.59e-08!24;UBERON:0007005!9.59e-08!24;UBERON:0004139!9.59e-08!24;UBERON:0004291!9.59e-08!24;UBERON:0001473!1.61e-07!8;UBERON:0004536!1.61e-07!8;UBERON:0006558!1.61e-07!8;UBERON:0001621!1.77e-07!3;UBERON:0003834!2.72e-07!5;UBERON:0001533!2.72e-07!5;UBERON:0003498!3.03e-07!5;UBERON:0005985!3.03e-07!5;UBERON:0003081!3.16e-07!216;UBERON:0000483!8.15e-07!309 | |ontology_enrichment_uberon=UBERON:0001637!6.80e-42!42;UBERON:0003509!6.80e-42!42;UBERON:0004572!6.80e-42!42;UBERON:0000055!1.77e-35!69;UBERON:0004573!4.01e-33!33;UBERON:0004571!4.01e-33!33;UBERON:0004872!9.72e-31!84;UBERON:0001981!4.87e-30!60;UBERON:0007500!4.87e-30!60;UBERON:0004537!4.87e-30!60;UBERON:0006965!4.87e-30!60;UBERON:0002049!2.37e-29!79;UBERON:0007798!2.37e-29!79;UBERON:0004535!1.08e-26!110;UBERON:0001009!1.34e-25!113;UBERON:0003914!2.81e-20!118;UBERON:0000947!1.49e-18!21;UBERON:0010191!1.49e-18!21;UBERON:0004290!1.37e-17!70;UBERON:0000486!6.56e-16!82;UBERON:0001134!1.68e-14!61;UBERON:0002036!1.68e-14!61;UBERON:0003082!1.68e-14!61;UBERON:0000914!1.80e-14!83;UBERON:0002329!1.80e-14!83;UBERON:0003077!1.80e-14!83;UBERON:0003059!1.80e-14!83;UBERON:0007282!1.80e-14!83;UBERON:0009618!1.80e-14!83;UBERON:0007285!1.80e-14!83;UBERON:0002385!8.46e-14!63;UBERON:0001015!8.46e-14!63;UBERON:0000383!8.46e-14!63;UBERON:0004237!6.82e-13!10;UBERON:0004695!6.82e-13!10;UBERON:0002111!6.82e-13!10;UBERON:0004178!6.82e-13!10;UBERON:0004111!1.66e-11!241;UBERON:0000490!3.72e-10!138;UBERON:0000477!1.60e-09!286;UBERON:0001310!4.94e-09!4;UBERON:0005256!2.12e-08!143;UBERON:0000415!4.32e-08!4;UBERON:0007240!4.32e-08!4;UBERON:0005742!4.32e-08!4;UBERON:0005734!4.32e-08!4;UBERON:0004664!4.32e-08!4;UBERON:0004663!4.32e-08!4;UBERON:0000025!4.74e-08!194;UBERON:0001135!5.60e-08!15;UBERON:0000992!8.80e-08!13;UBERON:0000948!9.59e-08!24;UBERON:0005498!9.59e-08!24;UBERON:0004140!9.59e-08!24;UBERON:0009881!9.59e-08!24;UBERON:0004141!9.59e-08!24;UBERON:0003084!9.59e-08!24;UBERON:0007005!9.59e-08!24;UBERON:0004139!9.59e-08!24;UBERON:0004291!9.59e-08!24;UBERON:0001473!1.61e-07!8;UBERON:0004536!1.61e-07!8;UBERON:0006558!1.61e-07!8;UBERON:0001621!1.77e-07!3;UBERON:0003834!2.72e-07!5;UBERON:0001533!2.72e-07!5;UBERON:0003498!3.03e-07!5;UBERON:0005985!3.03e-07!5;UBERON:0003081!3.16e-07!216;UBERON:0000483!8.15e-07!309 | ||
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|short_description=p@chr11:102661517..102661541,- | |short_description=p@chr11:102661517..102661541,- | ||
}} | }} |
Latest revision as of 17:30, 23 July 2015
Short description: | p@chr11:102661517..102661541, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:102661517..102661541, - |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.96e-67 | 32 |
smooth muscle cell | 6.91e-53 | 43 |
smooth muscle myoblast | 6.91e-53 | 43 |
muscle cell | 3.83e-40 | 55 |
muscle precursor cell | 8.82e-38 | 58 |
myoblast | 8.82e-38 | 58 |
multi-potent skeletal muscle stem cell | 8.82e-38 | 58 |
electrically responsive cell | 1.19e-35 | 61 |
electrically active cell | 1.19e-35 | 61 |
aortic smooth muscle cell | 2.39e-29 | 10 |
mesodermal cell | 9.20e-26 | 121 |
smooth muscle cell of the umbilical artery | 3.95e-19 | 4 |
smooth muscle cell of the subclavian artery | 1.32e-15 | 5 |
smooth muscle cell of the coronary artery | 1.75e-15 | 3 |
embryonic cell | 7.35e-11 | 250 |
smooth muscle cell of the internal thoracic artery | 1.83e-10 | 2 |
cardiocyte | 3.51e-10 | 16 |
multi fate stem cell | 3.67e-07 | 427 |
somatic stem cell | 5.93e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
connective tissue cancer | 1.74e-07 | 6 |
musculoskeletal system cancer | 1.74e-07 | 6 |