FFCP PHASE1:Hg19::chr12:127768750..127768765,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:127768750..127768765,+ | |||
|description=CAGE_peak_at_chr12:127768750..127768765,+ | |description=CAGE_peak_at_chr12:127768750..127768765,+ | ||
|id=chr12:127768750..127768765,+ | |id=chr12:127768750..127768765,+ | ||
|ontology_enrichment_celltype=CL:0000359!5.29e-21!32;CL:0000680!8.51e-21!57;CL:0000056!8.51e-21!57;CL:0000355!8.51e-21!57;CL:0000048!1.06e-18!430;CL:0000723!4.17e-18!436;CL:0000187!2.31e-17!54;CL:0000034!2.44e-17!444;CL:0000183!1.23e-16!59;CL:0000192!3.87e-16!42;CL:0000514!3.87e-16!42;CL:0000393!7.42e-15!60;CL:0000211!7.42e-15!60;CL:0002371!8.36e-14!591;CL:0000055!1.69e-13!180;CL:0000860!2.66e-12!45;CL:0002057!2.75e-12!42;CL:0000222!5.64e-12!119;CL:0000144!1.27e-11!625;CL:0002194!8.57e-10!63;CL:0000576!8.57e-10!63;CL:0000040!8.57e-10!63;CL:0000559!8.57e-10!63;CL:0002009!2.60e-09!65;CL:0000766!9.45e-09!76;CL:0002594!1.03e-08!4;CL:0000548!1.36e-08!679;CL:0000004!1.36e-08!679;CL:0000255!1.36e-08!679;CL:0000012!1.94e-08!682;CL:0000839!3.09e-08!70;CL:0000557!4.85e-08!71;CL:0002320!1.93e-07!365;CL:0002556!2.18e-07!6;CL:1000413!2.69e-07!9;CL:0002592!6.38e-07!3;CL:0002494!8.20e-07!16 | |ontology_enrichment_celltype=CL:0000359!5.29e-21!32;CL:0000680!8.51e-21!57;CL:0000056!8.51e-21!57;CL:0000355!8.51e-21!57;CL:0000048!1.06e-18!430;CL:0000723!4.17e-18!436;CL:0000187!2.31e-17!54;CL:0000034!2.44e-17!444;CL:0000183!1.23e-16!59;CL:0000192!3.87e-16!42;CL:0000514!3.87e-16!42;CL:0000393!7.42e-15!60;CL:0000211!7.42e-15!60;CL:0002371!8.36e-14!591;CL:0000055!1.69e-13!180;CL:0000860!2.66e-12!45;CL:0002057!2.75e-12!42;CL:0000222!5.64e-12!119;CL:0000144!1.27e-11!625;CL:0002194!8.57e-10!63;CL:0000576!8.57e-10!63;CL:0000040!8.57e-10!63;CL:0000559!8.57e-10!63;CL:0002009!2.60e-09!65;CL:0000766!9.45e-09!76;CL:0002594!1.03e-08!4;CL:0000548!1.36e-08!679;CL:0000004!1.36e-08!679;CL:0000255!1.36e-08!679;CL:0000012!1.94e-08!682;CL:0000839!3.09e-08!70;CL:0000557!4.85e-08!71;CL:0002320!1.93e-07!365;CL:0002556!2.18e-07!6;CL:1000413!2.69e-07!9;CL:0002592!6.38e-07!3;CL:0002494!8.20e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.92e-33;32!CL:0000192;2.27e-19;43!CL:0002594;8.35e-17;4!CL:0002596;4.61e-16;2!CL:0002540;1.77e-11;6!CL:0000187;6.10e-11;55!CL:0002592;1.70e-10;3!CL:0000393;3.42e-09;61!CL:0000211;3.42e-09;61!CL:0002494;2.51e-07;16!CL:0002092;4.50e-07;10!CL:0002539;5.10e-07;10!CL:0002595;7.07e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.89e-36,32;CL:0000192,3.33e-26,43;CL:0000514,3.33e-26,43;CL:0000680,7.24e-22,58;CL:0000056,7.24e-22,58;CL:0000355,7.24e-22,58;CL:0000187,5.87e-20,55;CL:0000393,9.35e-18,61;CL:0000211,9.35e-18,61;CL:0002594,8.59e-17,4;CL:0002596,4.79e-16,2;CL:0002540,1.56e-11,6;CL:0000222,1.38e-10,121;CL:0002592,1.48e-10,3;CL:0000048,1.23e-08,427;CL:0000723,1.89e-08,433;CL:0000034,3.28e-08,441;CL:0002494,2.56e-07,16;CL:0002092,4.19e-07,10;CL:0002539,5.05e-07,10;CL:0002595,6.87e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;2.27e-19;43!CL:0000355;1.20e-12;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!5.88e-31!42;UBERON:0003509!5.88e-31!42;UBERON:0004572!5.88e-31!42;UBERON:0002204!4.95e-29!167;UBERON:0004573!7.20e-25!33;UBERON:0004571!7.20e-25!33;UBERON:0000914!2.42e-24!83;UBERON:0002329!2.42e-24!83;UBERON:0003077!2.42e-24!83;UBERON:0003059!2.42e-24!83;UBERON:0007282!2.42e-24!83;UBERON:0009618!2.42e-24!83;UBERON:0007285!2.42e-24!83;UBERON:0001981!1.97e-22!60;UBERON:0007500!1.97e-22!60;UBERON:0004537!1.97e-22!60;UBERON:0006965!1.97e-22!60;UBERON:0003081!4.45e-22!216;UBERON:0004290!3.70e-21!70;UBERON:0004872!8.22e-20!84;UBERON:0001134!7.48e-19!61;UBERON:0002036!7.48e-19!61;UBERON:0003082!7.48e-19!61;UBERON:0000055!2.80e-18!69;UBERON:0002385!5.62e-18!63;UBERON:0001015!5.62e-18!63;UBERON:0000383!5.62e-18!63;UBERON:0000486!6.16e-18!82;UBERON:0000926!1.52e-16!448;UBERON:0004120!1.52e-16!448;UBERON:0006603!1.52e-16!448;UBERON:0004535!1.26e-15!110;UBERON:0001009!6.45e-15!113;UBERON:0002049!8.18e-15!79;UBERON:0007798!8.18e-15!79;UBERON:0003914!1.37e-13!118;UBERON:0005256!2.18e-13!143;UBERON:0004765!2.82e-12!101;UBERON:0001434!2.82e-12!101;UBERON:0000490!2.24e-10!138;UBERON:0002371!3.52e-10!80;UBERON:0000947!1.23e-09!21;UBERON:0010191!1.23e-09!21;UBERON:0001474!5.53e-09!86;UBERON:0003513!9.41e-09!8;UBERON:0001310!1.03e-08!4;UBERON:0002390!1.16e-08!102;UBERON:0003061!1.16e-08!102;UBERON:0001758!2.18e-07!6;UBERON:0003672!2.18e-07!6;UBERON:0003915!2.69e-07!9;UBERON:0004700!2.69e-07!9;UBERON:0001917!2.69e-07!9;UBERON:0000923!2.71e-07!604;UBERON:0005291!2.71e-07!604;UBERON:0006598!2.71e-07!604;UBERON:0002532!2.71e-07!604;UBERON:0002384!2.90e-07!375;UBERON:0002050!3.04e-07!605;UBERON:0005423!3.04e-07!605;UBERON:0002193!3.10e-07!112;UBERON:0002100!3.67e-07!216;UBERON:0000467!4.38e-07!625;UBERON:0000480!4.91e-07!626;UBERON:0001621!6.38e-07!3;UBERON:0000922!6.84e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.90e-22;33!UBERON:0004571;3.90e-22;33!UBERON:0001637;1.33e-20;42!UBERON:0003509;1.33e-20;42!UBERON:0004572;1.33e-20;42!UBERON:0001310;8.35e-17;4!UBERON:0005396;4.61e-16;2!UBERON:0007500;2.31e-14;56!UBERON:0001981;2.31e-14;56!UBERON:0004537;2.31e-14;56!UBERON:0003498;1.70e-10;3!UBERON:0005985;1.70e-10;3!UBERON:0001621;1.70e-10;3!UBERON:0003513;5.97e-10;7!UBERON:0000055;8.00e-09;65!UBERON:0003914;2.94e-08;74!UBERON:0002049;4.85e-08;75!UBERON:0007798;4.85e-08;75!UBERON:0010260;9.47e-08;9!UBERON:0004237;5.10e-07;10!UBERON:0004695;5.10e-07;10!UBERON:0002111;5.10e-07;10!UBERON:0004178;5.10e-07;10!UBERON:0003834;7.07e-07;5!UBERON:0001533;7.07e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.23e-31,42;UBERON:0003509,2.23e-31,42;UBERON:0004572,2.23e-31,42;UBERON:0004573,5.83e-25,33;UBERON:0004571,5.83e-25,33;UBERON:0007500,7.31e-25,59;UBERON:0001981,7.31e-25,59;UBERON:0004537,7.31e-25,59;UBERON:0006965,7.31e-25,59;UBERON:0002329,6.43e-23,71;UBERON:0003059,6.43e-23,71;UBERON:0007282,6.43e-23,71;UBERON:0004290,6.43e-23,71;UBERON:0009618,6.43e-23,71;UBERON:0003077,1.47e-22,72;UBERON:0007285,1.47e-22,72;UBERON:0007524,3.31e-22,73;UBERON:0004872,5.76e-22,83;UBERON:0000055,3.42e-21,68;UBERON:0007503,1.38e-20,78;UBERON:0001134,2.77e-20,62;UBERON:0002036,2.77e-20,62;UBERON:0003082,2.77e-20,62;UBERON:0002385,1.44e-19,64;UBERON:0001015,1.44e-19,64;UBERON:0000383,1.44e-19,64;UBERON:0000486,3.68e-19,83;UBERON:0002049,4.18e-18,78;UBERON:0007798,4.18e-18,78;UBERON:0001310,8.59e-17,4;UBERON:0003081,3.89e-16,203;UBERON:0005396,4.79e-16,2;UBERON:0004535,6.06e-16,109;UBERON:0001009,1.99e-15,112;UBERON:0002204,5.17e-15,167;UBERON:0003914,1.25e-14,117;UBERON:0005256,8.85e-14,122;UBERON:0000926,2.33e-13,315;UBERON:0004120,2.33e-13,315;UBERON:0006603,2.33e-13,315;UBERON:0000490,8.77e-11,148;UBERON:0001621,1.48e-10,3;UBERON:0003513,5.54e-10,7;UBERON:0003104,9.93e-10,160;UBERON:0009142,9.93e-10,160;UBERON:0010260,9.58e-08,9;UBERON:0000025,1.41e-07,192;UBERON:0002100,3.46e-07,199;UBERON:0004237,5.05e-07,10;UBERON:0004695,5.05e-07,10;UBERON:0002111,5.05e-07,10;UBERON:0004178,5.05e-07,10;UBERON:0003834,6.87e-07,5;UBERON:0001533,6.87e-07,5 | |||
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|short_description=p@chr12:127768750..127768765,+ | |short_description=p@chr12:127768750..127768765,+ | ||
}} | }} |
Latest revision as of 06:37, 24 July 2015
Short description: | p@chr12:127768750..127768765, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:127768750..127768765, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.89e-36 | 32 |
smooth muscle cell | 3.33e-26 | 43 |
smooth muscle myoblast | 3.33e-26 | 43 |
muscle precursor cell | 7.24e-22 | 58 |
myoblast | 7.24e-22 | 58 |
multi-potent skeletal muscle stem cell | 7.24e-22 | 58 |
muscle cell | 5.87e-20 | 55 |
electrically responsive cell | 9.35e-18 | 61 |
electrically active cell | 9.35e-18 | 61 |
smooth muscle cell of the umbilical artery | 8.59e-17 | 4 |
smooth muscle cell of the carotid artery | 4.79e-16 | 2 |
mesenchymal stem cell of the bone marrow | 1.56e-11 | 6 |
mesodermal cell | 1.38e-10 | 121 |
smooth muscle cell of the coronary artery | 1.48e-10 | 3 |
multi fate stem cell | 1.23e-08 | 427 |
somatic stem cell | 1.89e-08 | 433 |
stem cell | 3.28e-08 | 441 |
cardiocyte | 2.56e-07 | 16 |
bone marrow cell | 4.19e-07 | 10 |
aortic smooth muscle cell | 5.05e-07 | 10 |
smooth muscle cell of the subclavian artery | 6.87e-07 | 5 |