FFCP PHASE1:Hg19::chr19:13957417..13957455,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:13957417..13957455,-
|short_description=p@chr19:13957417..13957455,-
|description=CAGE_peak_at_chr19:13957417..13957455,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:13957417..13957455,- | |||
|coexpression_cluster_id=C1214 | |||
|description=CAGE_peak_at_chr19:13957417..13957455,- | |||
|id=chr19:13957417..13957455,- | |||
|ontology_enrichment_celltype=CL:0000738!1.38e-52!140;CL:0000037!3.30e-50!172;CL:0000566!3.30e-50!172;CL:0000988!1.04e-46!182;CL:0002057!9.22e-46!42;CL:0002032!1.69e-45!165;CL:0000837!1.69e-45!165;CL:0000860!2.23e-43!45;CL:0000766!1.81e-41!76;CL:0002087!9.90e-39!119;CL:0002031!5.77e-38!124;CL:0000763!1.23e-37!112;CL:0000049!1.23e-37!112;CL:0000557!1.08e-33!71;CL:0002009!9.03e-33!65;CL:0000839!3.28e-31!70;CL:0002194!5.34e-31!63;CL:0000576!5.34e-31!63;CL:0000040!5.34e-31!63;CL:0000559!5.34e-31!63;CL:0000134!7.68e-14!358;CL:0002320!2.21e-13!365;CL:0000219!8.86e-12!390;CL:0000094!5.29e-11!8;CL:0002393!4.07e-10!9;CL:0002397!4.07e-10!9;CL:0000081!3.82e-09!11;CL:0000034!5.36e-09!444;CL:0000048!2.86e-08!430;CL:0000723!4.51e-08!436;CL:0000542!7.34e-08!53;CL:0000051!7.34e-08!53;CL:0000838!1.90e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.46e-65;33!CL:0002057;2.46e-65;33!CL:0000473;4.64e-45;39!CL:0000234;4.64e-45;39!CL:0000576;1.66e-42;48!CL:0000766;4.26e-35;69!CL:0000094;3.19e-20;8!CL:0002087;1.35e-18;104!CL:0000081;1.67e-17;11!CL:0000763;2.61e-15;100!CL:0000738;9.60e-15;136!CL:0000988;1.39e-10;177!CL:0002393;7.00e-10;6!CL:0002397;7.00e-10;6!CL:0000623;5.13e-09;3!CL:0000624;5.14e-09;6!CL:0000767;1.56e-08;3!CL:0000775;1.99e-08;3!CL:0000226;1.67e-07;3!CL:0000842;1.67e-07;3!CL:0000219;2.59e-07;193!CL:0000791;6.58e-07;18!CL:0000789;6.58e-07;18!CL:0002419;6.58e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.14e-81,42;CL:0002057,1.14e-81,42;CL:0000766,5.81e-75,72;CL:0000738,3.66e-71,136;CL:0000473,6.01e-70,48;CL:0000234,6.01e-70,48;CL:0000557,4.73e-60,67;CL:0002009,5.02e-57,61;CL:0000037,2.75e-56,168;CL:0000839,1.50e-55,66;CL:0002031,1.18e-54,120;CL:0000988,3.03e-54,177;CL:0002194,1.48e-53,59;CL:0000576,1.48e-53,59;CL:0000040,1.48e-53,59;CL:0000559,1.48e-53,59;CL:0002087,7.60e-53,115;CL:0002032,1.10e-51,161;CL:0000837,1.10e-51,161;CL:0000763,2.12e-49,108;CL:0000049,2.12e-49,108;CL:0000094,2.97e-20,8;CL:0000134,3.17e-18,354;CL:0002320,1.57e-17,361;CL:0000081,1.59e-17,11;CL:0000219,4.38e-15,386;CL:0000034,7.37e-14,441;CL:0000048,9.48e-13,427;CL:0000723,2.49e-12,433;CL:0002393,9.16e-12,9;CL:0002397,9.16e-12,9;CL:0000624,5.10e-09,6;CL:0000623,5.27e-09,3;CL:0000825,5.27e-09,3;CL:0000767,1.64e-08,3;CL:0000775,1.76e-08,3;CL:0000226,1.99e-07,3;CL:0000842,1.99e-07,3;CL:0000791,6.44e-07,18;CL:0000789,6.44e-07,18;CL:0002420,6.44e-07,18;CL:0002419,6.44e-07,18;CL:0000790,6.44e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;1.39e-59;42!CL:0000049;9.47e-14;108!CL:0000790;6.58e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.14e-38!102;UBERON:0003061!8.14e-38!102;UBERON:0002193!1.99e-33!112;UBERON:0002371!1.72e-30!80;UBERON:0001474!5.41e-27!86;UBERON:0004765!5.89e-22!101;UBERON:0001434!5.89e-22!101;UBERON:0002405!7.41e-22!115;UBERON:0002384!4.77e-13!375;UBERON:0003081!4.12e-09!216;UBERON:0000178!1.29e-07!15;UBERON:0000179!1.29e-07!15;UBERON:0000463!1.29e-07!15;UBERON:0002204!1.35e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.47e-12;15!UBERON:0000179;1.47e-12;15!UBERON:0000463;1.47e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.24e-63,98;UBERON:0003061,2.24e-63,98;UBERON:0002193,4.00e-56,108;UBERON:0002371,3.39e-54,76;UBERON:0001474,2.61e-49,82;UBERON:0002405,4.91e-44,93;UBERON:0004765,8.38e-44,90;UBERON:0001434,3.72e-38,100;UBERON:0003081,7.42e-23,203;UBERON:0002204,7.40e-19,167;UBERON:0002384,1.40e-16,371;UBERON:0000178,1.56e-12,15;UBERON:0000179,1.56e-12,15;UBERON:0000463,1.56e-12,15;UBERON:0000926,2.72e-10,315;UBERON:0004120,2.72e-10,315;UBERON:0006603,2.72e-10,315 | |||
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| ||
|short_description=p@chr19:13957417..13957455,- | |||
}} | }} |
Latest revision as of 04:11, 26 July 2015
Short description: | p@chr19:13957417..13957455, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:13957417..13957455, - |
Coexpression cluster: | C1214_Eosinophils_Natural_CD14_Basophils_Neutrophils_Mast_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.24e-63 | 98 |
blood island | 2.24e-63 | 98 |
hemolymphoid system | 4.00e-56 | 108 |
bone marrow | 3.39e-54 | 76 |
bone element | 2.61e-49 | 82 |
immune system | 4.91e-44 | 93 |
skeletal element | 8.38e-44 | 90 |
skeletal system | 3.72e-38 | 100 |
lateral plate mesoderm | 7.42e-23 | 203 |
musculoskeletal system | 7.40e-19 | 167 |
connective tissue | 1.40e-16 | 371 |
blood | 1.56e-12 | 15 |
haemolymphatic fluid | 1.56e-12 | 15 |
organism substance | 1.56e-12 | 15 |
mesoderm | 2.72e-10 | 315 |
mesoderm-derived structure | 2.72e-10 | 315 |
presumptive mesoderm | 2.72e-10 | 315 |