FFCP PHASE1:Hg19::chr1:31229452..31229490,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:31229452..31229490,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_at_chr1:31229452..31229490,- | |description=CAGE_peak_at_chr1:31229452..31229490,- | ||
|id=chr1:31229452..31229490,- | |id=chr1:31229452..31229490,- | ||
|ontology_enrichment_celltype=CL:0000738!9.98e-73!140;CL:0000037!1.42e-66!172;CL:0000566!1.42e-66!172;CL:0002032!3.14e-63!165;CL:0000837!3.14e-63!165;CL:0002031!1.13e-61!124;CL:0002087!2.36e-61!119;CL:0000988!1.46e-59!182;CL:0000766!6.05e-48!76;CL:0000557!6.71e-41!71;CL:0000763!2.14e-39!112;CL:0000049!2.14e-39!112;CL:0000839!8.50e-39!70;CL:0002009!2.03e-38!65;CL:0002194!2.49e-37!63;CL:0000576!2.49e-37!63;CL:0000040!2.49e-37!63;CL:0000559!2.49e-37!63;CL:0002057!5.21e-36!42;CL:0000860!4.10e-32!45;CL:0000542!2.69e-20!53;CL:0000051!2.69e-20!53;CL:0000838!5.47e-20!52;CL:0000134!1.24e-12!358;CL:0000945!1.50e-12!24;CL:0000826!1.50e-12!24;CL:0002320!1.61e-11!365;CL:0000791!1.33e-09!18;CL:0000789!1.33e-09!18;CL:0002420!1.33e-09!18;CL:0002419!1.33e-09!18;CL:0000790!1.33e-09!18;CL:0000219!4.50e-09!390;CL:0000236!9.44e-09!14;CL:0000094!2.92e-08!8;CL:0002393!5.16e-08!9;CL:0002397!5.16e-08!9;CL:0000625!1.03e-07!11;CL:0000084!1.72e-07!25;CL:0000827!1.72e-07!25 | |ontology_enrichment_celltype=CL:0000738!9.98e-73!140;CL:0000037!1.42e-66!172;CL:0000566!1.42e-66!172;CL:0002032!3.14e-63!165;CL:0000837!3.14e-63!165;CL:0002031!1.13e-61!124;CL:0002087!2.36e-61!119;CL:0000988!1.46e-59!182;CL:0000766!6.05e-48!76;CL:0000557!6.71e-41!71;CL:0000763!2.14e-39!112;CL:0000049!2.14e-39!112;CL:0000839!8.50e-39!70;CL:0002009!2.03e-38!65;CL:0002194!2.49e-37!63;CL:0000576!2.49e-37!63;CL:0000040!2.49e-37!63;CL:0000559!2.49e-37!63;CL:0002057!5.21e-36!42;CL:0000860!4.10e-32!45;CL:0000542!2.69e-20!53;CL:0000051!2.69e-20!53;CL:0000838!5.47e-20!52;CL:0000134!1.24e-12!358;CL:0000945!1.50e-12!24;CL:0000826!1.50e-12!24;CL:0002320!1.61e-11!365;CL:0000791!1.33e-09!18;CL:0000789!1.33e-09!18;CL:0002420!1.33e-09!18;CL:0002419!1.33e-09!18;CL:0000790!1.33e-09!18;CL:0000219!4.50e-09!390;CL:0000236!9.44e-09!14;CL:0000094!2.92e-08!8;CL:0002393!5.16e-08!9;CL:0002397!5.16e-08!9;CL:0000625!1.03e-07!11;CL:0000084!1.72e-07!25;CL:0000827!1.72e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.21e-39;33!CL:0002057;3.21e-39;33!CL:0000473;1.45e-38;39!CL:0000234;1.45e-38;39!CL:0000576;1.35e-33;48!CL:0000766;2.67e-32;69!CL:0002087;5.06e-23;104!CL:0000738;1.04e-19;136!CL:0000763;2.32e-16;100!CL:0000791;9.75e-14;18!CL:0000789;9.75e-14;18!CL:0002419;9.75e-14;18!CL:0000542;1.93e-12;53!CL:0000988;1.96e-12;177!CL:0000094;1.45e-11;8!CL:0000945;1.90e-11;24!CL:0000625;1.43e-10;11!CL:0000084;1.15e-09;25!CL:0000219;3.55e-09;193!CL:0000236;5.63e-09;13!CL:0000235;2.34e-08;6!CL:0002393;2.95e-08;6!CL:0002397;2.95e-08;6!CL:0000081;8.58e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.03e-99,136;CL:0002031,2.44e-85,120;CL:0000037,5.65e-83,168;CL:0002087,1.30e-82,115;CL:0002032,6.23e-79,161;CL:0000837,6.23e-79,161;CL:0000988,8.56e-77,177;CL:0000766,6.46e-74,72;CL:0000557,1.91e-63,67;CL:0000839,1.57e-60,66;CL:0000473,2.78e-60,48;CL:0000234,2.78e-60,48;CL:0002009,1.81e-59,61;CL:0002194,7.48e-58,59;CL:0000576,7.48e-58,59;CL:0000040,7.48e-58,59;CL:0000559,7.48e-58,59;CL:0000860,4.34e-53,42;CL:0002057,4.34e-53,42;CL:0000763,7.31e-53,108;CL:0000049,7.31e-53,108;CL:0000838,3.05e-22,52;CL:0000134,7.61e-22,354;CL:0000542,1.38e-21,53;CL:0000051,1.38e-21,53;CL:0002320,9.79e-21,361;CL:0000219,7.04e-17,386;CL:0000791,7.36e-14,18;CL:0000789,7.36e-14,18;CL:0002420,7.36e-14,18;CL:0002419,7.36e-14,18;CL:0000790,7.36e-14,18;CL:0000048,9.86e-13,427;CL:0000034,3.05e-12,441;CL:0000723,4.17e-12,433;CL:0000094,1.47e-11,8;CL:0000945,1.91e-11,24;CL:0000826,1.91e-11,24;CL:0002393,3.44e-11,9;CL:0002397,3.44e-11,9;CL:0000625,9.65e-11,11;CL:0000084,8.66e-10,25;CL:0000827,8.66e-10,25;CL:0000236,1.14e-09,14;CL:0000235,2.32e-08,6;CL:0000081,8.68e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.40e-38;42!CL:0000049;8.45e-15;108!CL:0000790;9.75e-14;18!CL:0000051;1.93e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.37e-42!102;UBERON:0003061!2.37e-42!102;UBERON:0002193!2.20e-39!112;UBERON:0002371!1.19e-34!80;UBERON:0001474!7.22e-31!86;UBERON:0002405!4.75e-28!115;UBERON:0004765!5.66e-22!101;UBERON:0001434!5.66e-22!101;UBERON:0007023!1.56e-11!115;UBERON:0002384!9.10e-11!375;UBERON:0003081!2.16e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.74e-08;15!UBERON:0000179;1.74e-08;15!UBERON:0000463;1.74e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.01e-64,98;UBERON:0003061,2.01e-64,98;UBERON:0002193,3.14e-59,108;UBERON:0002371,3.08e-53,76;UBERON:0002405,9.12e-51,93;UBERON:0001474,1.09e-47,82;UBERON:0004765,1.85e-41,90;UBERON:0001434,4.16e-35,100;UBERON:0003081,7.37e-21,203;UBERON:0002384,6.63e-20,371;UBERON:0002204,4.20e-14,167;UBERON:0000178,1.42e-08,15;UBERON:0000179,1.42e-08,15;UBERON:0000463,1.42e-08,15;UBERON:0000926,5.20e-07,315;UBERON:0004120,5.20e-07,315;UBERON:0006603,5.20e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0.246242116153576,0,0,0,0,0,6.95361992306356,8.70266248169425,6.61170563034906,45.6302561144729,23.41359328393,45.3611241316103,0,0,0,0.0774672005803016,0.710846162437108,0.293600439334847,29.9157520607214,32.488200490163,12.3696196308036,0.447830948479849,1.29557466407592,1.80302897343931,46.2366399319016,68.7734217513633,45.6058035033094,53.4586784883075,69.4873730756886,52.3403766812725,29.6323164091815,31.5077669030794,26.249527517633,45.8511755379703,63.257498991215,46.0450054420762,59.2963369559205,93.8797156198989,63.3720226135139,62.747197936035,121.311172234763,47.310947309129,25.7284014145639,31.7147215618395,21.7374622771674,36.5663640672016,53.9015963456583,46.7116686746681,38.189797119025,40.1541847183555,38.0080478233954,28.4537766237683,76.6017482854134,38.6084112677879,16.4779123323315,12.5436536979376,10.063614984402,21.0054540243946,13.9664510342601,8.35773050824817,11.1154970059087,6.16641699317179,7.12390199682072,3.51992488922645,6.00752472388345,6.22656477704488,3.41384178053206,9.20910770182829,4.02326707968138,1.32208974556972,7.63243003628291,3.98449078376614,5.87237189370939,9.55683070313072,1.32171328579026,11.2101712596307,0,3.540775862049,3.14408610199332,3.90642848099067,2.34061093546949,1.30368906653436,0.946895611469467,0,7.24167969753628,1.47302953737419,3.32300841875432,2.16643091012012,5.37983542847836,5.46249259751489,1.47994114143309,2.76350017785848,2.60822777161547,2.66915813691709,0.267540828089713,1.04535523804977,3.73920830901968,4.59864592322305,2.06176467289578,2.53019692019503,3.82278497188916,2.60433381542567,1.90090408889675,4.81840381048873,4.8634912238679,8.74515085866421,5.44587679701239,5.74789597844733,5.44338206706778,3.7441627409691,3.47578569318718,0,0,0,0,0,0,0.795285947051099,0,0,0,0,1.11332214173056,0,0,0,0.348259474598534,1.46253756570752,3.57735936458013,4.57595928624102,3.34311751196608,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,102.788725600129,81.4338554711483,0,0,0,0,0,0.709336764396714,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,4.14404764057442,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,13.5419353348069,44.4608103764552,32.9961180280977,0,0,0,0.895585227028483,0,0,14.7798971368783,16.8172508965262,4.97587477297853,6.62951785718023,3.28230326908588,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.378615870531,12.5564272858032,14.7583757638122,0,0,0,0,0,0.179060963239896,0,4.92576900504818,3.66566877261179,4.2353201972317,0,0,0,0.670065061337395,0,39.6973722692007,23.932916736322,32.7388255614468,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,15.0940659069708,16.1785650613963,9.49875264450655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,2.53723804616085,1.52927441428475,1.70894156152249,2.62054953003568,3.29089818468955,5.18778648954174,4.86028293514303,3.96562588147135,0,0,0,0.743212700502875,0.28853842595289,0,0.318852545457645,0.199579371432817,7.66021480529467,0.846694330895531,0,0,0.228234679033192,0.313359791546046,0,0.169291777801603,0.1605880751037,0.201799707191048,1.70338495076131,0,2.45792611446766,4.69719826574073,2.83643540910244,0.19538809540204,6.68174817348582,0,2.43410110628385,0,0,0,5.71381899160387,0,0.334330152832435,0,0,2.37571744666111,0.307160702099232,0,0.422008249231538,0,0,0,1.59398390600856,0.828851746593443,0,0.102268682502155,4.92339221844278,0,0,0,0,1.28236427328014,4.7896618469388,0,0,1.20598527610407,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0,0,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0.957003479195758,0.0915975934018623,1.5991043280559,0,3.61054589708557,0.498635045700469,0,0,0,0,0.476809736941136,0,0,0,0,0,0.884575645033392,0,0,0,0,0.741412462787447,0,0.702793337176017,0.91227394607833,0,0.242780379534093,0,0,0,8.27744193133192,0,0,0.664653872707185,0.330991955875499,1.56966459203613,3.58417289318877,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0.397429223405979,0.316553979779393,0,0.160317640503067,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0.305994652908965,0,1.20084057741958,0.410716136675979,0,0,0,1.11712960508902,0,0,0.199679000498991,0.858452096273142,0,0.53746777989381,0,0,0,0,0,0,0.423366660328922,1.59045937961861,0.544813624446302,0,0,0,4.94942561413301,1.5476039091159,0.364497339948148,0.335434687599266,1.57611414598396,0.314727528809989,0,0,0,0,0,0,0,0,0,0,2.13440553948281,0,0.226624183040251,0.87931340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| ||
|short_description=p@chr1:31229452..31229490,- | |short_description=p@chr1:31229452..31229490,- | ||
}} | }} |
Latest revision as of 07:06, 28 July 2015
Short description: | p@chr1:31229452..31229490, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:31229452..31229490, - |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.01e-64 | 98 |
blood island | 2.01e-64 | 98 |
hemolymphoid system | 3.14e-59 | 108 |
bone marrow | 3.08e-53 | 76 |
immune system | 9.12e-51 | 93 |
bone element | 1.09e-47 | 82 |
skeletal element | 1.85e-41 | 90 |
skeletal system | 4.16e-35 | 100 |
lateral plate mesoderm | 7.37e-21 | 203 |
connective tissue | 6.63e-20 | 371 |
musculoskeletal system | 4.20e-14 | 167 |
blood | 1.42e-08 | 15 |
haemolymphatic fluid | 1.42e-08 | 15 |
organism substance | 1.42e-08 | 15 |
mesoderm | 5.20e-07 | 315 |
mesoderm-derived structure | 5.20e-07 | 315 |
presumptive mesoderm | 5.20e-07 | 315 |