FFCP PHASE1:Hg19::chr2:210598049..210598077,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:210598049..210598077,+ | |||
|coexpression_cluster_id=C1049 | |||
|description=CAGE_peak_at_chr2:210598049..210598077,+ | |||
|id=chr2:210598049..210598077,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;3.53e-07;6!CL:0000404;3.53e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.72e-09,8;CL:0000540,4.20e-07,6;CL:0000031,4.20e-07,6;CL:0000404,4.20e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.91e-14;3!UBERON:0006601;1.82e-13;82!UBERON:0010122;3.36e-10;2!CL:0000031;3.53e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.94e-63!57;UBERON:0005068!1.94e-63!57;UBERON:0006241!1.94e-63!57;UBERON:0007135!1.94e-63!57;UBERON:0003075!1.17e-58!86;UBERON:0007284!1.17e-58!86;UBERON:0002346!3.09e-55!90;UBERON:0002616!3.33e-55!59;UBERON:0005743!2.22e-54!86;UBERON:0001017!1.07e-53!82;UBERON:0002780!2.36e-53!41;UBERON:0001890!2.36e-53!41;UBERON:0006240!2.36e-53!41;UBERON:0003080!8.25e-52!42;UBERON:0000073!2.15e-51!94;UBERON:0001016!2.15e-51!94;UBERON:0000955!1.11e-48!69;UBERON:0006238!1.11e-48!69;UBERON:0002020!3.62e-45!34;UBERON:0003528!3.62e-45!34;UBERON:0001893!1.22e-44!34;UBERON:0003056!4.71e-44!61;UBERON:0002791!4.15e-43!33;UBERON:0001869!4.93e-42!32;UBERON:0004121!1.16e-39!169;UBERON:0000924!2.97e-38!173;UBERON:0006601!2.97e-38!173;UBERON:0002619!9.35e-36!22;UBERON:0001950!4.67e-32!20;UBERON:0007023!1.22e-31!115;UBERON:0000956!9.34e-31!25;UBERON:0000203!9.34e-31!25;UBERON:0000033!9.82e-31!123;UBERON:0000153!1.57e-28!129;UBERON:0007811!1.57e-28!129;UBERON:0000025!6.46e-20!194;UBERON:0000483!1.50e-18!309;UBERON:0000119!3.71e-18!312;UBERON:0002420!2.89e-16!9;UBERON:0007245!2.89e-16!9;UBERON:0010009!2.89e-16!9;UBERON:0010011!2.89e-16!9;UBERON:0000454!2.89e-16!9;UBERON:0002308!6.42e-16!9;UBERON:0000125!6.42e-16!9;UBERON:0004111!2.52e-15!241;UBERON:0000064!4.19e-15!219;UBERON:0000477!4.19e-13!286;UBERON:0009663!1.15e-12!7;UBERON:0003076!1.21e-12!15;UBERON:0003057!1.21e-12!15;UBERON:0001871!1.12e-11!7;UBERON:0000200!1.91e-11!6;UBERON:0004733!6.21e-11!12;UBERON:0002028!6.21e-11!12;UBERON:0007277!6.21e-11!12;UBERON:0000475!1.00e-10!365;UBERON:0000349!1.89e-10!5;UBERON:0002298!3.50e-10!8;UBERON:0004732!6.25e-10!13;UBERON:0001894!6.54e-10!7;UBERON:0006222!6.54e-10!7;UBERON:0002021!1.50e-09!5;UBERON:0001872!1.67e-09!5;UBERON:0000062!1.28e-08!511;UBERON:0000369!2.75e-08!4;UBERON:0002435!2.75e-08!4;UBERON:0000204!2.75e-08!4;UBERON:0010082!2.75e-08!4;UBERON:0000481!6.18e-08!347;UBERON:0000922!2.27e-07!612;UBERON:0002680!4.25e-07!9;UBERON:0001895!4.25e-07!9;UBERON:0010092!4.25e-07!9;UBERON:0002771!5.11e-07!3;UBERON:0000923!7.25e-07!604;UBERON:0005291!7.25e-07!604;UBERON:0006598!7.25e-07!604;UBERON:0002532!7.25e-07!604;UBERON:0002050!8.18e-07!605;UBERON:0005423!8.18e-07!605;UBERON:0005383!8.67e-07!3;UBERON:0005382!8.67e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.93e-51;34!UBERON:0002020;3.93e-51;34!UBERON:0002619;3.89e-50;22!UBERON:0002780;7.95e-50;41!UBERON:0001890;7.95e-50;41!UBERON:0002791;1.27e-48;32!UBERON:0001869;1.45e-48;32!UBERON:0000073;1.19e-47;53!UBERON:0002616;1.19e-47;53!UBERON:0000956;6.53e-44;25!UBERON:0000203;6.53e-44;25!UBERON:0001893;3.77e-42;34!UBERON:0001950;8.40e-42;20!UBERON:0000955;5.02e-31;68!UBERON:0001017;3.65e-30;75!UBERON:0001016;2.21e-23;83!UBERON:0001894;4.43e-23;7!UBERON:0002784;5.86e-19;4!UBERON:0002420;3.01e-18;9!UBERON:0007245;3.01e-18;9!UBERON:0010009;3.01e-18;9!UBERON:0010011;3.01e-18;9!UBERON:0000454;3.01e-18;9!UBERON:0000125;1.06e-17;9!UBERON:0002308;1.06e-17;9!UBERON:0001871;2.71e-17;6!UBERON:0004733;3.69e-17;12!UBERON:0002028;3.69e-17;12!UBERON:0000349;3.94e-16;5!UBERON:0004732;8.99e-16;13!UBERON:0002021;1.74e-15;5!UBERON:0005383;1.21e-14;3!UBERON:0005382;1.21e-14;3!UBERON:0000200;3.77e-13;6!UBERON:0002680;3.32e-12;9!UBERON:0001895;3.32e-12;9!UBERON:0002298;5.47e-12;6!UBERON:0007023;2.86e-11;114!UBERON:0000369;4.19e-11;4!UBERON:0002435;4.19e-11;4!UBERON:0000204;4.19e-11;4!UBERON:0003296;4.41e-11;4!UBERON:0010133;4.41e-11;4!UBERON:0001954;4.79e-11;2!UBERON:0003022;4.79e-11;2!UBERON:0002421;4.79e-11;2!UBERON:0002600;4.79e-11;2!UBERON:0001876;7.76e-11;2!UBERON:0002771;8.54e-11;2!UBERON:0009663;1.12e-10;7!UBERON:0001905;1.17e-10;2!UBERON:0002757;1.17e-10;2!UBERON:0010134;1.17e-10;2!UBERON:0005408;1.17e-10;2!UBERON:0001899;1.17e-10;2!UBERON:0002702;1.28e-10;2!UBERON:0001873;3.36e-10;2!UBERON:0001897;4.86e-10;2!UBERON:0010225;4.86e-10;2!UBERON:0002148;5.57e-10;2!UBERON:0006331;5.57e-10;2!UBERON:0009662;5.57e-10;2!UBERON:0001872;2.89e-09;5!UBERON:0011216;3.81e-09;132!UBERON:0010314;2.03e-07;132!UBERON:0001870;2.40e-07;3!UBERON:0002037;3.53e-07;6!UBERON:0000988;6.33e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.90e-87,56;UBERON:0005068,2.90e-87,56;UBERON:0006241,2.90e-87,56;UBERON:0007135,2.90e-87,56;UBERON:0000073,6.11e-87,53;UBERON:0002616,6.11e-87,53;UBERON:0001017,5.94e-77,81;UBERON:0002780,2.35e-70,41;UBERON:0001890,2.35e-70,41;UBERON:0003080,2.35e-70,41;UBERON:0006240,2.35e-70,41;UBERON:0001016,1.14e-68,89;UBERON:0000955,2.00e-65,68;UBERON:0006238,2.00e-65,68;UBERON:0003528,1.17e-60,34;UBERON:0002020,1.17e-60,34;UBERON:0003075,1.23e-57,82;UBERON:0007284,1.23e-57,82;UBERON:0002346,1.20e-54,86;UBERON:0002791,2.28e-53,32;UBERON:0001869,2.28e-53,32;UBERON:0002619,3.05e-50,22;UBERON:0001893,4.84e-50,34;UBERON:0010371,6.70e-47,104;UBERON:0003056,1.12e-45,61;UBERON:0000956,5.28e-44,25;UBERON:0000203,5.28e-44,25;UBERON:0001950,6.47e-42,20;UBERON:0010314,1.37e-35,132;UBERON:0007023,1.16e-34,114;UBERON:0004121,1.29e-34,171;UBERON:0000924,1.29e-34,171;UBERON:0006601,1.29e-34,171;UBERON:0011216,2.07e-26,223;UBERON:0001894,3.65e-23,7;UBERON:0006222,3.65e-23,7;UBERON:0000025,1.45e-20,192;UBERON:0002784,6.00e-19,4;UBERON:0002420,2.43e-18,9;UBERON:0007245,2.43e-18,9;UBERON:0010009,2.43e-18,9;UBERON:0010011,2.43e-18,9;UBERON:0000454,2.43e-18,9;UBERON:0000125,9.46e-18,9;UBERON:0002308,9.46e-18,9;UBERON:0003076,1.49e-17,15;UBERON:0003057,1.49e-17,15;UBERON:0001871,2.37e-17,6;UBERON:0004733,5.01e-17,12;UBERON:0002028,5.01e-17,12;UBERON:0007277,5.01e-17,12;UBERON:0000349,3.95e-16,5;UBERON:0004732,1.19e-15,13;UBERON:0002021,1.77e-15,5;UBERON:0004111,5.47e-15,240;UBERON:0005383,1.11e-14,3;UBERON:0005382,1.11e-14,3;UBERON:0000200,3.38e-13,6;UBERON:0002680,4.13e-12,9;UBERON:0001895,4.13e-12,9;UBERON:0010092,4.13e-12,9;UBERON:0002298,6.34e-12,6;UBERON:0003296,3.65e-11,4;UBERON:0010133,3.65e-11,4;UBERON:0000369,3.91e-11,4;UBERON:0002435,3.91e-11,4;UBERON:0000204,3.91e-11,4;UBERON:0010082,3.91e-11,4;UBERON:0000483,4.55e-11,306;UBERON:0001954,5.03e-11,2;UBERON:0003022,5.03e-11,2;UBERON:0002421,5.03e-11,2;UBERON:0002600,5.03e-11,2;UBERON:0000119,6.88e-11,309;UBERON:0002771,7.40e-11,2;UBERON:0001876,7.40e-11,2;UBERON:0009663,9.58e-11,7;UBERON:0001905,1.14e-10,2;UBERON:0002757,1.14e-10,2;UBERON:0010134,1.14e-10,2;UBERON:0005408,1.14e-10,2;UBERON:0001899,1.14e-10,2;UBERON:0002702,1.25e-10,2;UBERON:0001873,2.92e-10,2;UBERON:0010122,2.92e-10,2;UBERON:0001897,5.09e-10,2;UBERON:0010225,5.09e-10,2;UBERON:0002148,6.11e-10,2;UBERON:0006331,6.11e-10,2;UBERON:0009662,6.11e-10,2;UBERON:0001872,2.55e-09,5;UBERON:0001870,2.37e-07,3;UBERON:0002037,4.11e-07,6;UBERON:0006215,4.11e-07,6;UBERON:0000988,6.72e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,1.27047312111232,0,1.54657762555539,1.00509759200609,3.18969375826582,0,0,0,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970884173996107,0,0,0,0,0,11.9297717731956,5.62677665642051,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0.834912883456661,0,0,0,0,0,0,0,0,0,3.29887490373255,3.54296554325536,3.73848959738765,3.05163472634166,1.3269511191747,1.18219047581419,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,2.81117334870407,0,0.19566461893209,0,0,0,5.50930970934882,0,0,0,0,0,0,0,0,0.554698692052555,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,1.12990370390266,0,0,0.633107959558787,0.195551382734803,0.0801588202515337,0,0,0,0.114536596165916,0.171594997861965,0,0,0,0,0,0,0,1.80126086612937,0.821432273351958,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,14.3141344165675,7.08257711780193,0,0,0,0,0,0.425246896606173,0,0,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32709321450791,2.24795422962573,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,6.2024772597689,6.9554970994119,4.63206443614049,1.72022758707021,1.10929051536852,0.124192805882767,0,0,0,0,0,1.87333962322753,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,6.35988806297962,0,0,0,0,0.491545817507439,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0.436838552768056,0,0,0,0,0,0.23658523500376,0,0,0,0.770750701157514,4.25089728976755,4.46974805360024,6.35860729146341,4.28521883576921,0.0691572524642179,7.75083099032885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.742913430802341,3.90539049306924,8.26747186004736,0.380494861163441,6.56369770821863,0,0,0,0.127762427639595,14.4639495687137,3.36283722218824,1.82089681270989,0,0,0,0.171488009437418,0.611727596791485,0.197318320688547,0,0,0,5.18481446722806,0,0,0,0,0.0714765441766563,0.316027223465453,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0.596852325484105,0,0,0.219881033490858,0.150962843566674,0,0,0,0,0.235676547101626,2.94462700672418,0,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,0,0,0.286679166302903,0.157771562193185,0.203974470572744,6.10890966476528,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,4.1458471972939,1.65492793379032,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:210598049..210598077,+ | |||
}} |
Latest revision as of 05:40, 29 July 2015
Short description: | p@chr2:210598049..210598077, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:210598049..210598077, + |
Coexpression cluster: | C1049_pineal_medial_hippocampus_middle_occipital_amygdala_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.72e-09 | 8 |
neuron | 4.20e-07 | 6 |
neuroblast | 4.20e-07 | 6 |
electrically signaling cell | 4.20e-07 | 6 |