FFCP PHASE1:Mm9::chr10:109893253..109893269,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:109893253..109893269,-|id=chr10:109893253..109893269,-|ontology_enrichment_celltype=CL:0000117!1.75e-14!23;CL:0000337!1.75e-14!23;CL:0000540!3.67e-10!33;CL:0000047!3.67e-10!33;CL:0000031!3.67e-10!33;CL:0000404!3.67e-10!33;CL:0002319!1.23e-07!43;CL:0000221!2.98e-07!44;CL:0000133!2.98e-07!44;CL:0000393!3.25e-07!39;CL:0000211!3.25e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.13e-18,23;CL:0000337,1.13e-18,23;CL:0000540,3.07e-12,33;CL:0000047,3.07e-12,33;CL:0000031,3.07e-12,33;CL:0000404,3.07e-12,33;CL:0000393,5.74e-10,39;CL:0000211,5.74e-10,39;CL:0002613,1.58e-09,3;CL:0000120,2.71e-09,3;CL:0002319,8.30e-09,43;CL:0000221,1.50e-08,44;CL:0000133,1.50e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!6.25e-23!34;UBERON:0001049!2.38e-22!52;UBERON:0005068!2.38e-22!52;UBERON:0006241!2.38e-22!52;UBERON:0007135!2.38e-22!52;UBERON:0000073!3.32e-21!75;UBERON:0001016!3.32e-21!75;UBERON:0001017!1.01e-20!73;UBERON:0005743!1.01e-20!73;UBERON:0002791!4.76e-19!29;UBERON:0003528!4.76e-19!29;UBERON:0001893!4.76e-19!29;UBERON:0000955!7.53e-19!50;UBERON:0006238!7.53e-19!50;UBERON:0002616!3.11e-18!49;UBERON:0003080!4.74e-18!40;UBERON:0002780!1.43e-17!39;UBERON:0001890!1.43e-17!39;UBERON:0006240!1.43e-17!39;UBERON:0003056!5.44e-15!49;UBERON:0000033!3.99e-14!63;UBERON:0002346!5.02e-14!71;UBERON:0003075!5.02e-14!71;UBERON:0007284!5.02e-14!71;UBERON:0000956!9.58e-14!21;UBERON:0001869!9.58e-14!21;UBERON:0000203!9.58e-14!21;UBERON:0004121!5.00e-12!102;UBERON:0000924!5.00e-12!102;UBERON:0006601!5.00e-12!102;UBERON:0002619!5.18e-11!17;UBERON:0000025!1.62e-10!114;UBERON:0002021!1.95e-10!10;UBERON:0000411!1.95e-10!10;UBERON:0001950!1.95e-10!10;UBERON:0004111!1.60e-08!122|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.14e-43,34;UBERON:0003528,5.65e-39,29;UBERON:0002791,5.65e-39,29;UBERON:0001893,5.65e-39,29;UBERON:0002021,1.22e-31,10;UBERON:0000411,1.22e-31,10;UBERON:0001950,1.22e-31,10;UBERON:0002780,6.60e-28,39;UBERON:0001890,6.60e-28,39;UBERON:0006240,6.60e-28,39;UBERON:0003080,4.19e-27,40;UBERON:0000956,4.43e-27,21;UBERON:0001869,4.43e-27,21;UBERON:0000203,4.43e-27,21;UBERON:0001049,5.91e-27,52;UBERON:0005068,5.91e-27,52;UBERON:0006241,5.91e-27,52;UBERON:0007135,5.91e-27,52;UBERON:0000073,8.75e-26,54;UBERON:0002619,2.56e-25,17;UBERON:0001017,1.28e-23,73;UBERON:0002616,5.11e-23,46;UBERON:0001016,7.45e-23,75;UBERON:0000955,1.94e-22,47;UBERON:0006238,1.94e-22,47;UBERON:0003056,2.38e-21,49;UBERON:0002346,5.03e-21,64;UBERON:0003075,5.03e-21,64;UBERON:0007284,5.03e-21,64;UBERON:0010371,7.48e-18,73;UBERON:0004121,5.56e-17,95;UBERON:0000924,5.56e-17,95;UBERON:0006601,5.56e-17,95;UBERON:0000369,1.11e-14,5;UBERON:0002435,1.11e-14,5;UBERON:0000204,1.11e-14,5;UBERON:0010082,1.11e-14,5;UBERON:0010314,1.39e-14,92;UBERON:0002420,1.20e-12,8;UBERON:0007245,1.20e-12,8;UBERON:0010009,1.20e-12,8;UBERON:0010011,1.20e-12,8;UBERON:0000454,1.20e-12,8;UBERON:0000025,7.97e-11,114;UBERON:0004111,8.58e-10,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63011399117477,1.05798195854407,1.90149421051854,0,0,0,0,0,0.599200221036809,0,0.622137673850866,0.810035629990144,1.05162480675691,0.856952953211411,1.32521124570968,1.83736198822431,0.766763768145891,1.83843757322004,0,0.383062014255563,0.307213066512487,1.71452174049252,2.01272815925301,2.6045668527838,0.279182999001381,1.12552522006336,0.30559649555362,1.47314292736834,0.854230084794618,2.98239113320481,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.449371918214468,1.37250180845588,2.1361239859187,2.78118912307642,6.13717097592793,0.62336413367868,0.973447578406546,0.101839363850316,0.124406970610093,0.505445516867349,0,0.130120442962704,0.229902104433473,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0.414251545071004,0.469052119962192,0.540186184383045,0,0.590292695242212,0.771335564436891,0.930135779001631,1.3413670069981,0.583826711835847,0.987359099480883,0.32833492815819,0,0,0,0,0.420579897128254,0.514523061896422,0,0,0,0.464473343720877,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0,0,0,0,0.668396022247182,0.283076530788832,0,0.292255857911312,0,0.642642632843614,0,0,0.651547837414304,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0,0,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:109893253..109893269,- | |||
|description=CAGE_peak_at_chr10:109893253..109893269,- | |||
|id=chr10:109893253..109893269,- | |||
|ontology_enrichment_celltype=CL:0000117!1.75e-14!23;CL:0000337!1.75e-14!23;CL:0000540!3.67e-10!33;CL:0000047!3.67e-10!33;CL:0000031!3.67e-10!33;CL:0000404!3.67e-10!33;CL:0002319!1.23e-07!43;CL:0000221!2.98e-07!44;CL:0000133!2.98e-07!44;CL:0000393!3.25e-07!39;CL:0000211!3.25e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.13e-18,23;CL:0000337,1.13e-18,23;CL:0000540,3.07e-12,33;CL:0000047,3.07e-12,33;CL:0000031,3.07e-12,33;CL:0000404,3.07e-12,33;CL:0000393,5.74e-10,39;CL:0000211,5.74e-10,39;CL:0002613,1.58e-09,3;CL:0000120,2.71e-09,3;CL:0002319,8.30e-09,43;CL:0000221,1.50e-08,44;CL:0000133,1.50e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!6.25e-23!34;UBERON:0001049!2.38e-22!52;UBERON:0005068!2.38e-22!52;UBERON:0006241!2.38e-22!52;UBERON:0007135!2.38e-22!52;UBERON:0000073!3.32e-21!75;UBERON:0001016!3.32e-21!75;UBERON:0001017!1.01e-20!73;UBERON:0005743!1.01e-20!73;UBERON:0002791!4.76e-19!29;UBERON:0003528!4.76e-19!29;UBERON:0001893!4.76e-19!29;UBERON:0000955!7.53e-19!50;UBERON:0006238!7.53e-19!50;UBERON:0002616!3.11e-18!49;UBERON:0003080!4.74e-18!40;UBERON:0002780!1.43e-17!39;UBERON:0001890!1.43e-17!39;UBERON:0006240!1.43e-17!39;UBERON:0003056!5.44e-15!49;UBERON:0000033!3.99e-14!63;UBERON:0002346!5.02e-14!71;UBERON:0003075!5.02e-14!71;UBERON:0007284!5.02e-14!71;UBERON:0000956!9.58e-14!21;UBERON:0001869!9.58e-14!21;UBERON:0000203!9.58e-14!21;UBERON:0004121!5.00e-12!102;UBERON:0000924!5.00e-12!102;UBERON:0006601!5.00e-12!102;UBERON:0002619!5.18e-11!17;UBERON:0000025!1.62e-10!114;UBERON:0002021!1.95e-10!10;UBERON:0000411!1.95e-10!10;UBERON:0001950!1.95e-10!10;UBERON:0004111!1.60e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.14e-43,34;UBERON:0003528,5.65e-39,29;UBERON:0002791,5.65e-39,29;UBERON:0001893,5.65e-39,29;UBERON:0002021,1.22e-31,10;UBERON:0000411,1.22e-31,10;UBERON:0001950,1.22e-31,10;UBERON:0002780,6.60e-28,39;UBERON:0001890,6.60e-28,39;UBERON:0006240,6.60e-28,39;UBERON:0003080,4.19e-27,40;UBERON:0000956,4.43e-27,21;UBERON:0001869,4.43e-27,21;UBERON:0000203,4.43e-27,21;UBERON:0001049,5.91e-27,52;UBERON:0005068,5.91e-27,52;UBERON:0006241,5.91e-27,52;UBERON:0007135,5.91e-27,52;UBERON:0000073,8.75e-26,54;UBERON:0002619,2.56e-25,17;UBERON:0001017,1.28e-23,73;UBERON:0002616,5.11e-23,46;UBERON:0001016,7.45e-23,75;UBERON:0000955,1.94e-22,47;UBERON:0006238,1.94e-22,47;UBERON:0003056,2.38e-21,49;UBERON:0002346,5.03e-21,64;UBERON:0003075,5.03e-21,64;UBERON:0007284,5.03e-21,64;UBERON:0010371,7.48e-18,73;UBERON:0004121,5.56e-17,95;UBERON:0000924,5.56e-17,95;UBERON:0006601,5.56e-17,95;UBERON:0000369,1.11e-14,5;UBERON:0002435,1.11e-14,5;UBERON:0000204,1.11e-14,5;UBERON:0010082,1.11e-14,5;UBERON:0010314,1.39e-14,92;UBERON:0002420,1.20e-12,8;UBERON:0007245,1.20e-12,8;UBERON:0010009,1.20e-12,8;UBERON:0010011,1.20e-12,8;UBERON:0000454,1.20e-12,8;UBERON:0000025,7.97e-11,114;UBERON:0004111,8.58e-10,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63011399117477,1.05798195854407,1.90149421051854,0,0,0,0,0,0.599200221036809,0,0.622137673850866,0.810035629990144,1.05162480675691,0.856952953211411,1.32521124570968,1.83736198822431,0.766763768145891,1.83843757322004,0,0.383062014255563,0.307213066512487,1.71452174049252,2.01272815925301,2.6045668527838,0.279182999001381,1.12552522006336,0.30559649555362,1.47314292736834,0.854230084794618,2.98239113320481,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.449371918214468,1.37250180845588,2.1361239859187,2.78118912307642,6.13717097592793,0.62336413367868,0.973447578406546,0.101839363850316,0.124406970610093,0.505445516867349,0,0.130120442962704,0.229902104433473,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0.414251545071004,0.469052119962192,0.540186184383045,0,0.590292695242212,0.771335564436891,0.930135779001631,1.3413670069981,0.583826711835847,0.987359099480883,0.32833492815819,0,0,0,0,0.420579897128254,0.514523061896422,0,0,0,0.464473343720877,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0,0,0,0,0.668396022247182,0.283076530788832,0,0.292255857911312,0,0.642642632843614,0,0,0.651547837414304,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0.428674070063185,0,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0.218362563746178,0.269728692769641,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,8.74617949363636,10.3121192419091,6.35856774671644,4.11049511862385,8.3093328712867,6.07520250208625,5.40385443869065,5.43770890781046,6.73088405277366,0.103787347584177,0,0.170733605754134,0.243106717068294,0.419226325255965,0.367687016900028,1.11123363900808,0.412070114477788,0.64183841918363,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.512201219238954,0.459483751644906,0,0.927074607558844,0,0.824171801606613,0.294397840268795,0,0.532427418478012,0.476872379894642,0.581385666529314,1.12931256498397,0.676916863133412,0.365855945745545,0,0.135804113845862,0,0.593175090620871,0.29551344712669,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0,0.765153328275374,0,0 | |||
|short_description=p@chr10:109893253..109893269,- | |||
}} |
Latest revision as of 20:40, 3 August 2015
Short description: | p@chr10:109893253..109893269, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:109893253..109893269, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.13e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.13e-18 | 23 |
neuron | 3.07e-12 | 33 |
neuronal stem cell | 3.07e-12 | 33 |
neuroblast | 3.07e-12 | 33 |
electrically signaling cell | 3.07e-12 | 33 |
electrically responsive cell | 5.74e-10 | 39 |
electrically active cell | 5.74e-10 | 39 |
striatum neuron | 1.58e-09 | 3 |
granule cell | 2.71e-09 | 3 |
neural cell | 8.30e-09 | 43 |
ectodermal cell | 1.50e-08 | 44 |
neurectodermal cell | 1.50e-08 | 44 |