FFCP PHASE1:Mm9::chr2:125664179..125664199,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=64|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:125664179..125664199,+|id=chr2:125664179..125664199,+|ontology_enrichment_celltype=CL:0000723!1.05e-16!91;CL:0000048!1.05e-16!91;CL:0000548!1.09e-16!115;CL:0000004!1.09e-16!115;CL:0000255!1.09e-16!115;CL:0002371!1.22e-15!118;CL:0000034!1.27e-15!97;CL:0000144!3.42e-15!121;CL:0000012!3.42e-15!121;CL:0002321!1.18e-14!70;CL:0000220!1.18e-14!70;CL:0000055!3.81e-13!50;CL:0000393!6.46e-13!39;CL:0000211!6.46e-13!39;CL:0000540!1.85e-12!33;CL:0000047!1.85e-12!33;CL:0000031!1.85e-12!33;CL:0000404!1.85e-12!33;CL:0002319!5.64e-12!43;CL:0000221!1.95e-11!44;CL:0000133!1.95e-11!44;CL:0000839!2.85e-10!13;CL:0000763!1.51e-08!16;CL:0000414!3.88e-08!11;CL:0000117!5.92e-08!23;CL:0000337!5.92e-08!23;CL:0000050!2.80e-07!9;CL:0000049!4.05e-07!19;CL:0002320!6.46e-07!46;CL:0000134!6.46e-07!46;CL:0000107!7.66e-07!9|ontology_enrichment_celltype_v019_2=CL:0000723,3.50e-18,91;CL:0000048,3.50e-18,91;CL:0000034,1.58e-16,97;CL:0002319,4.68e-14,43;CL:0000540,7.70e-14,33;CL:0000047,7.70e-14,33;CL:0000031,7.70e-14,33;CL:0000404,7.70e-14,33;CL:0000221,1.28e-13,44;CL:0000133,1.28e-13,44;CL:0002321,2.02e-13,70;CL:0000393,1.26e-12,39;CL:0000211,1.26e-12,39;CL:0000839,3.74e-11,13;CL:0000763,1.04e-08,16;CL:0000107,1.45e-08,9;CL:0002194,4.65e-08,4;CL:0000766,4.65e-08,4;CL:0000234,4.65e-08,4;CL:0000576,4.65e-08,4;CL:0000235,4.65e-08,4;CL:0000864,4.65e-08,4;CL:0002009,4.65e-08,4;CL:0000040,4.65e-08,4;CL:0000559,4.65e-08,4;CL:0000117,6.98e-08,23;CL:0000337,6.98e-08,23;CL:0002320,1.43e-07,46;CL:0000134,1.43e-07,46;CL:0000764,1.93e-07,3;CL:0000765,1.93e-07,3;CL:0000038,1.93e-07,3;CL:0000547,1.93e-07,3;CL:0000049,4.75e-07,19;CL:0000219,7.25e-07,54;CL:0000182,7.27e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,1.93e-07,3;DOID:0060083,1.93e-07,3;DOID:1240,1.93e-07,3|ontology_enrichment_uberon=UBERON:0001017!5.91e-13!73;UBERON:0005743!5.91e-13!73;UBERON:0000073!1.09e-12!75;UBERON:0001016!1.09e-12!75;UBERON:0002020!2.35e-09!34;UBERON:0002021!6.70e-09!10;UBERON:0000411!6.70e-09!10;UBERON:0001950!6.70e-09!10;UBERON:0002371!3.61e-08!16;UBERON:0004121!2.90e-07!102;UBERON:0000924!2.90e-07!102;UBERON:0006601!2.90e-07!102;UBERON:0001049!4.53e-07!52;UBERON:0005068!4.53e-07!52;UBERON:0006241!4.53e-07!52;UBERON:0007135!4.53e-07!52;UBERON:0002384!6.46e-07!46;UBERON:0002410!7.66e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.27e-17,10;UBERON:0000411,1.27e-17,10;UBERON:0001950,1.27e-17,10;UBERON:0001017,1.52e-17,73;UBERON:0001016,7.15e-17,75;UBERON:0002020,4.49e-14,34;UBERON:0004121,1.01e-11,95;UBERON:0000924,1.01e-11,95;UBERON:0006601,1.01e-11,95;UBERON:0000073,9.16e-11,54;UBERON:0003528,9.02e-10,29;UBERON:0002791,9.02e-10,29;UBERON:0001893,9.02e-10,29;UBERON:0002619,1.76e-09,17;UBERON:0001049,7.75e-09,52;UBERON:0005068,7.75e-09,52;UBERON:0006241,7.75e-09,52;UBERON:0007135,7.75e-09,52;UBERON:0000956,1.03e-08,21;UBERON:0001869,1.03e-08,21;UBERON:0000203,1.03e-08,21;UBERON:0002410,1.45e-08,9;UBERON:0002346,4.92e-08,64;UBERON:0003075,4.92e-08,64;UBERON:0007284,4.92e-08,64;UBERON:0002384,1.43e-07,46;UBERON:0000010,7.85e-07,11;UBERON:0002371,8.62e-07,16|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0.171200729931206,0,0.999329285446988,1.01237633694913,8.39474253753776,0.630924330716475,0.411343300817216,0.42438965179803,0,0.0992909512008853,0.522399578277871,0.159992422793407,0.22940928106717,0,0,0,0.380046838912748,0,0.221730510655305,13.3356441426523,4.92051830067656,3645.07866335509,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,4.69434806608824,0,0.439372365468944,0,0,0,0,0,0,0.514518872071894,0.286533439938757,4.64104883049698,1.21389876515759,0.528990979272033,0,0,0,0.449949858640699,53.3987835786166,10.6572017241915,3.89480143673926,2.68952813725088,0.414758449233911,0.945041568321835,1.05162480675691,3.99911378165325,1.32521124570968,0.367472397644862,0,0,173.983091979034,1.40456071893706,0.153606533256243,0.263772575460388,0,0,1.3959149950069,6.75315132038016,3.66715794664344,9.1334861496837,3.27454865837937,0.745597783301202,0.075726193333184,0,0.289864488701678,0.860423876981386,1.3599426674155,18.8896117073236,5.84798775702902,5.82434953226536,0,0,0,1.06001872353102,0,0,0,7.11066703153331,0.649473123033642,0.506719730950197,0.505524445014783,0,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0.189106080167819,0,0,0.556094498451196,0.348252166522167,0,0,0,0,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0,0,0,0.134206418760372,0,0,0.660837565967596,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0.224862112384854,0.405720242777006,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0.964887042726734,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,16.5870412333199,1.08781136763742,0,0,0,0,0,0,1.26203287766503,0.780877488593277,1.07711698866399,1.91175038362042,2.22798674082394,1.13230612315533,0.404810701674894,1.16902343164525,3.16230222357219,0,0,0,0,0,1.32745138339963,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.680879211507576,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0.138199973804424,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0,0.226730383615211,0.221985953374065,0,0,0,0.187682475451182,0,0.214368379079066,0,3.95326289831947,2.30162618253588,2.29158205375759,1.3748254587495,4.11049511862385,3.7769694869485,6.75022500231806,2.2516060161211,3.17199686288943,2.07104124700728,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.749431733813838,0.233931608445408,0,0,0,0|short_description=p@chr2:125664179..125664199,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=64 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:125664179..125664199,+ | |||
|description=CAGE_peak_at_chr2:125664179..125664199,+ | |||
|id=chr2:125664179..125664199,+ | |||
|ontology_enrichment_celltype=CL:0000723!1.05e-16!91;CL:0000048!1.05e-16!91;CL:0000548!1.09e-16!115;CL:0000004!1.09e-16!115;CL:0000255!1.09e-16!115;CL:0002371!1.22e-15!118;CL:0000034!1.27e-15!97;CL:0000144!3.42e-15!121;CL:0000012!3.42e-15!121;CL:0002321!1.18e-14!70;CL:0000220!1.18e-14!70;CL:0000055!3.81e-13!50;CL:0000393!6.46e-13!39;CL:0000211!6.46e-13!39;CL:0000540!1.85e-12!33;CL:0000047!1.85e-12!33;CL:0000031!1.85e-12!33;CL:0000404!1.85e-12!33;CL:0002319!5.64e-12!43;CL:0000221!1.95e-11!44;CL:0000133!1.95e-11!44;CL:0000839!2.85e-10!13;CL:0000763!1.51e-08!16;CL:0000414!3.88e-08!11;CL:0000117!5.92e-08!23;CL:0000337!5.92e-08!23;CL:0000050!2.80e-07!9;CL:0000049!4.05e-07!19;CL:0002320!6.46e-07!46;CL:0000134!6.46e-07!46;CL:0000107!7.66e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,3.50e-18,91;CL:0000048,3.50e-18,91;CL:0000034,1.58e-16,97;CL:0002319,4.68e-14,43;CL:0000540,7.70e-14,33;CL:0000047,7.70e-14,33;CL:0000031,7.70e-14,33;CL:0000404,7.70e-14,33;CL:0000221,1.28e-13,44;CL:0000133,1.28e-13,44;CL:0002321,2.02e-13,70;CL:0000393,1.26e-12,39;CL:0000211,1.26e-12,39;CL:0000839,3.74e-11,13;CL:0000763,1.04e-08,16;CL:0000107,1.45e-08,9;CL:0002194,4.65e-08,4;CL:0000766,4.65e-08,4;CL:0000234,4.65e-08,4;CL:0000576,4.65e-08,4;CL:0000235,4.65e-08,4;CL:0000864,4.65e-08,4;CL:0002009,4.65e-08,4;CL:0000040,4.65e-08,4;CL:0000559,4.65e-08,4;CL:0000117,6.98e-08,23;CL:0000337,6.98e-08,23;CL:0002320,1.43e-07,46;CL:0000134,1.43e-07,46;CL:0000764,1.93e-07,3;CL:0000765,1.93e-07,3;CL:0000038,1.93e-07,3;CL:0000547,1.93e-07,3;CL:0000049,4.75e-07,19;CL:0000219,7.25e-07,54;CL:0000182,7.27e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.93e-07,3;DOID:0060083,1.93e-07,3;DOID:1240,1.93e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001017!5.91e-13!73;UBERON:0005743!5.91e-13!73;UBERON:0000073!1.09e-12!75;UBERON:0001016!1.09e-12!75;UBERON:0002020!2.35e-09!34;UBERON:0002021!6.70e-09!10;UBERON:0000411!6.70e-09!10;UBERON:0001950!6.70e-09!10;UBERON:0002371!3.61e-08!16;UBERON:0004121!2.90e-07!102;UBERON:0000924!2.90e-07!102;UBERON:0006601!2.90e-07!102;UBERON:0001049!4.53e-07!52;UBERON:0005068!4.53e-07!52;UBERON:0006241!4.53e-07!52;UBERON:0007135!4.53e-07!52;UBERON:0002384!6.46e-07!46;UBERON:0002410!7.66e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.27e-17,10;UBERON:0000411,1.27e-17,10;UBERON:0001950,1.27e-17,10;UBERON:0001017,1.52e-17,73;UBERON:0001016,7.15e-17,75;UBERON:0002020,4.49e-14,34;UBERON:0004121,1.01e-11,95;UBERON:0000924,1.01e-11,95;UBERON:0006601,1.01e-11,95;UBERON:0000073,9.16e-11,54;UBERON:0003528,9.02e-10,29;UBERON:0002791,9.02e-10,29;UBERON:0001893,9.02e-10,29;UBERON:0002619,1.76e-09,17;UBERON:0001049,7.75e-09,52;UBERON:0005068,7.75e-09,52;UBERON:0006241,7.75e-09,52;UBERON:0007135,7.75e-09,52;UBERON:0000956,1.03e-08,21;UBERON:0001869,1.03e-08,21;UBERON:0000203,1.03e-08,21;UBERON:0002410,1.45e-08,9;UBERON:0002346,4.92e-08,64;UBERON:0003075,4.92e-08,64;UBERON:0007284,4.92e-08,64;UBERON:0002384,1.43e-07,46;UBERON:0000010,7.85e-07,11;UBERON:0002371,8.62e-07,16 | |||
|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0.171200729931206,0,0.999329285446988,1.01237633694913,8.39474253753776,0.630924330716475,0.411343300817216,0.42438965179803,0,0.0992909512008853,0.522399578277871,0.159992422793407,0.22940928106717,0,0,0,0.380046838912748,0,0.221730510655305,13.3356441426523,4.92051830067656,3645.07866335509,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,4.69434806608824,0,0.439372365468944,0,0,0,0,0,0,0.514518872071894,0.286533439938757,4.64104883049698,1.21389876515759,0.528990979272033,0,0,0,0.449949858640699,53.3987835786166,10.6572017241915,3.89480143673926,2.68952813725088,0.414758449233911,0.945041568321835,1.05162480675691,3.99911378165325,1.32521124570968,0.367472397644862,0,0,173.983091979034,1.40456071893706,0.153606533256243,0.263772575460388,0,0,1.3959149950069,6.75315132038016,3.66715794664344,9.1334861496837,3.27454865837937,0.745597783301202,0.075726193333184,0,0.289864488701678,0.860423876981386,1.3599426674155,18.8896117073236,5.84798775702902,5.82434953226536,0,0,0,1.06001872353102,0,0,0,7.11066703153331,0.649473123033642,0.506719730950197,0.505524445014783,0,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0.189106080167819,0,0,0.556094498451196,0.348252166522167,0,0,0,0,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0,0,0,0.134206418760372,0,0,0.660837565967596,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0.224862112384854,0.405720242777006,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0.964887042726734,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,16.5870412333199,1.08781136763742,0,0,0,0,0,0,1.26203287766503,0.780877488593277,1.07711698866399,1.91175038362042,2.22798674082394,1.13230612315533,0.404810701674894,1.16902343164525,3.16230222357219,0,0,0,0,0,1.32745138339963,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.680879211507576,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0.138199973804424,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0,0.226730383615211,0.221985953374065,0,0,0,0.187682475451182,0,0.214368379079066,0,3.95326289831947,2.30162618253588,2.29158205375759,1.3748254587495,4.11049511862385,3.7769694869485,6.75022500231806,2.2516060161211,3.17199686288943,2.07104124700728,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.749431733813838,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr2:125664179..125664199,+ | |||
}} |
Latest revision as of 22:56, 3 August 2015
Short description: | p@chr2:125664179..125664199, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:125664179..125664199, + |
Coexpression cluster: | MCL_coexpression_mm9:64 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.27e-17 | 10 |
visual cortex | 1.27e-17 | 10 |
neocortex | 1.27e-17 | 10 |
central nervous system | 1.52e-17 | 73 |
nervous system | 7.15e-17 | 75 |
gray matter | 4.49e-14 | 34 |
ectoderm-derived structure | 1.01e-11 | 95 |
ectoderm | 1.01e-11 | 95 |
presumptive ectoderm | 1.01e-11 | 95 |
regional part of nervous system | 9.16e-11 | 54 |
brain grey matter | 9.02e-10 | 29 |
regional part of telencephalon | 9.02e-10 | 29 |
telencephalon | 9.02e-10 | 29 |
regional part of cerebral cortex | 1.76e-09 | 17 |
neural tube | 7.75e-09 | 52 |
neural rod | 7.75e-09 | 52 |
future spinal cord | 7.75e-09 | 52 |
neural keel | 7.75e-09 | 52 |
cerebral cortex | 1.03e-08 | 21 |
cerebral hemisphere | 1.03e-08 | 21 |
pallium | 1.03e-08 | 21 |
autonomic nervous system | 1.45e-08 | 9 |
neurectoderm | 4.92e-08 | 64 |
neural plate | 4.92e-08 | 64 |
presumptive neural plate | 4.92e-08 | 64 |
connective tissue | 1.43e-07 | 46 |
peripheral nervous system | 7.85e-07 | 11 |
bone marrow | 8.62e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.93e-07 | 3 |
immune system cancer | 1.93e-07 | 3 |
leukemia | 1.93e-07 | 3 |